BAC Information

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BAC

Clone NameB6Ng01-153L02
Chromosome10 (Build37)
Map Location 83,557,509 - 83,742,229
singlet/doubletdoublet
Overlap genenone
Upstream geneChst11, Slc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225, C230099D08Rik
Downstream geneLOC432482, Nuak1, Ckap4, Tcp11l2, Polr3b, Rfx4, EG625690, Ric8b, Fhl4, AI597468, Mterfd3, Cry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153L02.bB6Ng01-153L02.g
ACCDH948931DH948932
length1,243853
definitionDH948931|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L02, 5' end.DH948932|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,741,001 - 83,742,229)(83,557,509 - 83,558,361)
sequence
gaattctactcctactatgagtgtagaagtaggcattatccctttgtata
aattttctctggctatttgaacaaaccactatagcttagtaacttaaatc
gataggaatgcagttacaggtctgtgggacaggagactaatatgagtctt
accaaaatcacaactatctcatggtgagaagggatttgagcacactggtc
ttcactagttataaccatatggttaaccactgtgtgatgctggctgggtc
ttgaggtagctgtcaccttttatatatgattagtgtgtgtcaggccccac
tctgagcatatgctttcatctaaaggcaagaaaccaagatggcaactcaa
ataaaatgaccactattcagccagcatccgctatgtggcagtcattctgg
tgggtaccagaccacaatcccttcactgaatctcagagtttggagtagat
gctattggccttttatcttcccattgagaacggtggctcagagagatgga
aaattctatgctgtctgattgttactggtgtctgaaattaaggagcaaaa
accgtgaccaaaagcaagctgggaaggaaagggttaatttgatttaaaca
tccatattgctgttcatcaccagaggaagccaggacaggaactcaaacag
ggcagggacctggaggcaggagatgatgtagaggtcatggaagggtgctg
cttactggcttgctcctcatgactttctcagtctgctttcttatagaacc
caggaccaccagcctgggtatggctctgcccaccatggacagggctctct
ccctattgttgactaattgagaaaatgtcttacagctggatctcatggag
gcatttcctcaactgaggctccttcttctctgatgacttaaactttgtgt
caagctgatgcaaaatcagtcagccagctagaaagtccacagctcttgca
actgcaggatctagactcttatcaaaatgcccaccttgacaaaccacttt
ttcactcccagcctgttcaatttcctgatctttcttccgcaccattttcc
tacgaatgatctttcatcctaagaaataaaatctgacttgtgctcctgga
cataatcctgggcttccgttatgaatagcgctccgtgttcattaactccc
agtagtaatcttacatgaggaaagaacaactcccctctacaactccagac
tctatgtttaaaatggctagcgaccgattctcttctttaaaaa
gaattcttcactactctggcctctgtagtagagggacaggacaggaaggg
gtgagggtaggtgatgatttagccagttacctgtgtctgccatcatggat
cacaagaggctttcacgggcccactgctaatctccctgaatggaccacag
aaagcaacagagccagcagacccttaacacctaaaggataaggaggtggg
agaacttcaaaattagtttcacagaagtttaggacccagctctgtcctct
actctctattttctcagctacaatagcactattgcaaagactgattactt
tagcgtcttagttaggatttcattgctgtgaagagacgccatgaccatag
caactcttactggggctggtttacagtttcagaggttcagtccattatca
tgatggggagcatggcagcatccaagacagacatggtactggaggagcca
agagttctacatcttgatccacaggcatcagacggagactgttgggcata
gtttgagcataggagccctcaaagcctgcaaccactatgacacacttcct
ccaacaaggccacacctactccaataaggacacacctcctaatagcacct
ctgcctatggccaagcattcaaacacatcagtctgggggtggggcatttc
taatcaaagcaccacacatagtcagaggactggacacataagatctgttt
aggccattaacctctctgttcaggacaagttgtggtaaagttatccccac
cccaattctttgattttgttgctgtttttgtgatctccaatttctgggtc
agatgttccttcactgttctatgagggccacaagtactcataatttccaa
tga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_83741001_83742229
seq2: B6Ng01-153L02.b_44_1286 (reverse)

seq1  TTTTTAAAGAA-AGAAAAATGCTCAAGGCATATTTTAAACATAGATTTGG  49
      ||||||||||| ||||     | | || |  |||||||||||||| |  |
seq2  TTTTTAAAGAAGAGAATCGGTCGCTAGCC--ATTTTAAACATAGAGTCTG  48

seq1  AATTTGAAGATG---GTTGGATACCATC--CATTAAAAATATACTA----  90
       | ||| ||| |   ||||  | |  ||  |||  || || |||||    
seq2  GAGTTGTAGAGGGGAGTTG--TTCTTTCCTCATGTAAGAT-TACTACTGG  95

seq1  GAGTTATAGAA-ACAGAAAGCTATACATAACGAAAG-CCAGGCTTA-GTC  137
      ||||||  ||| || ||  ||||| ||||||| ||| ||||| ||| |||
seq2  GAGTTAATGAACACGGAGCGCTATTCATAACGGAAGCCCAGGATTATGTC  145

seq1  CAGGAGCACAAGTCAGA-CTTATTTC-TAGGATGGAAGATCCCTTCGTA-  184
      |||||||||||||||||  ||||||| ||||||| ||||| | |||||| 
seq2  CAGGAGCACAAGTCAGATTTTATTTCTTAGGATGAAAGAT-CATTCGTAG  194

seq1  GAGAAT-GTGCAGAGGAAAGATCAGGAATTTGAACAGGCTGGGAGTGGAA  233
      || ||| |||| || ||||||||||||| |||||||||||||||||| ||
seq2  GAAAATGGTGCGGAAGAAAGATCAGGAAATTGAACAGGCTGGGAGTGAAA  244

seq1  AAGTGGTTTGTC-AGGTGGGCATTTTGATAAGAGTCTAGATCCTGCAGTT  282
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTTTGTCAAGGTGGGCATTTTGATAAGAGTCTAGATCCTGCAGTT  294

seq1  GCAAGAGCTGTGGACTTTCTAGCTGGCTGGCTGATTTTGCATCAGCTTGA  332
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCAAGAGCTGTGGACTTTCTAGCTGGCTGACTGATTTTGCATCAGCTTGA  344

seq1  CAC-AAGGTTAAGTCATCAGAGAAGAAGGAGCCTCAGTTGAGGAAATGCC  381
      ||| ||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGTTTAAGTCATCAGAGAAGAAGGAGCCTCAGTTGAGGAAATGCC  394

seq1  TCCATGAGATCCAGCTGTAAGACATTTTCTCAATTAGTCAACAATA-GGA  430
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCCATGAGATCCAGCTGTAAGACATTTTCTCAATTAGTCAACAATAGGGA  444

seq1  GAGAGCCCTGTCCATGGTGGGCAGAGCCATACCCAGGCTGGTGGTCCTGG  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCCTGTCCATGGTGGGCAGAGCCATACCCAGGCTGGTGGTCCTGG  494

seq1  GTTCTATAAGAAAGCAGACTGAGAAAGTCATGAGGAGCAAGCCAGTAAGC  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATAAGAAAGCAGACTGAGAAAGTCATGAGGAGCAAGCCAGTAAGC  544

seq1  AGCACCCTTCCATGACCTCTACATCATCTCCTGCCTCCAGGTCCCTGCCC  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCTTCCATGACCTCTACATCATCTCCTGCCTCCAGGTCCCTGCCC  594

seq1  TGTTTGAGTTCCTGTCCTGGCTTCCTCTGGTGATGAACAGCAATATGGAT  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAGTTCCTGTCCTGGCTTCCTCTGGTGATGAACAGCAATATGGAT  644

seq1  GTTTAAATCAAATTAACCCTTTCCTTCCCAGCTTGCTTTTGGTCACGGTT  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAATCAAATTAACCCTTTCCTTCCCAGCTTGCTTTTGGTCACGGTT  694

seq1  TTTGCTCCTTAATTTCAGACACCAGTAACAATCAGACAGCATAGAATTTT  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCCTTAATTTCAGACACCAGTAACAATCAGACAGCATAGAATTTT  744

seq1  CCATCTCTCTGAGCCACCGTTCTCAATGGGAAGATAAAAGGCCAATAGCA  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTCTGAGCCACCGTTCTCAATGGGAAGATAAAAGGCCAATAGCA  794

seq1  TCTACTCCAAACTCTGAGATTCAGTGAAGGGATTGTGGTCTGGTACCCAC  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCCAAACTCTGAGATTCAGTGAAGGGATTGTGGTCTGGTACCCAC  844

seq1  CAGAATGACTGCCACATAGCGGATGCTGGCTGAATAGTGGTCATTTTATT  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGACTGCCACATAGCGGATGCTGGCTGAATAGTGGTCATTTTATT  894

seq1  TGAGTTGCCATCTTGGTTTCTTGCCTTTAGATGAAAGCATATGCTCAGAG  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGCCATCTTGGTTTCTTGCCTTTAGATGAAAGCATATGCTCAGAG  944

seq1  TGGGGCCTGACACACACTAATCATATATAAAAGGTGACAGCTACCTCAAG  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCTGACACACACTAATCATATATAAAAGGTGACAGCTACCTCAAG  994

seq1  ACCCAGCCAGCATCACACAGTGGTTAACCATATGGTTATAACTAGTGAAG  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCCAGCATCACACAGTGGTTAACCATATGGTTATAACTAGTGAAG  1044

seq1  ACCAGTGTGCTCAAATCCCTTCTCACCATGAGATAGTTGTGATTTTGGTA  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGTGCTCAAATCCCTTCTCACCATGAGATAGTTGTGATTTTGGTA  1094

seq1  AGACTCATATTAGTCTCCTGTCCCACAGACCTGTAACTGCATTCCTATCG  1130
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCATATTAGTCTCCTGTCCCACAGACCTGTAACTGCATTCCTATCG  1144

seq1  ATTTAAGTTACTAAGCTATAGTGGTTTGTTCAAATAGCCAGAGAAAATTT  1180
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTACTAAGCTATAGTGGTTTGTTCAAATAGCCAGAGAAAATTT  1194

seq1  ATACAAAGGGATAATGCCTACTTCTACACTCATAGTAGGAGTAGAATTC  1229
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAGGGATAATGCCTACTTCTACACTCATAGTAGGAGTAGAATTC  1243

seq1: chr10_83557509_83558361
seq2: B6Ng01-153L02.g_68_920

seq1  GAATTCTTCACTACTCTGGCCTCTGTAGTAGAGGGACAGGACAGGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCACTACTCTGGCCTCTGTAGTAGAGGGACAGGACAGGAAGGG  50

seq1  GTGAGGGTAGGTGATGATTTAGCCAGTTACCTGTGTCTGCCATCATGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGTAGGTGATGATTTAGCCAGTTACCTGTGTCTGCCATCATGGAT  100

seq1  CACAAGAGGCTTTCACGGGCCCACTGCTAATCTCCCTGAATGGACCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGAGGCTTTCACGGGCCCACTGCTAATCTCCCTGAATGGACCACAG  150

seq1  AAAGCAACAGAGCCAGCAGACCCTTAACACCTAAAGGATAAGGAGGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAACAGAGCCAGCAGACCCTTAACACCTAAAGGATAAGGAGGTGGG  200

seq1  AGAACTTCAAAATTAGTTTCACAGAAGTTTAGGACCCAGCTCTGTCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCAAAATTAGTTTCACAGAAGTTTAGGACCCAGCTCTGTCCTCT  250

seq1  ACTCTCTATTTTCTCAGCTACAATAGCACTATTGCAAAGACTGATTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTATTTTCTCAGCTACAATAGCACTATTGCAAAGACTGATTACTT  300

seq1  TAGCGTCTTAGTTAGGATTTCATTGCTGTGAAGAGACGCCATGACCATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGTCTTAGTTAGGATTTCATTGCTGTGAAGAGACGCCATGACCATAG  350

seq1  CAACTCTTACTGGGGCTGGTTTACAGTTTCAGAGGTTCAGTCCATTATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTTACTGGGGCTGGTTTACAGTTTCAGAGGTTCAGTCCATTATCA  400

seq1  TGATGGGGAGCATGGCAGCATCCAAGACAGACATGGTACTGGAGGAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGGAGCATGGCAGCATCCAAGACAGACATGGTACTGGAGGAGCCA  450

seq1  AGAGTTCTACATCTTGATCCACAGGCATCAGACGGAGACTGTTGGGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCTACATCTTGATCCACAGGCATCAGACGGAGACTGTTGGGCATA  500

seq1  GTTTGAGCATAGGAGCCCTCAAAGCCTGCAACCACTATGACACACTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGCATAGGAGCCCTCAAAGCCTGCAACCACTATGACACACTTCCT  550

seq1  CCAACAAGGCCACACCTACTCCAATAAGGACACACCTCCTAATAGCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGGCCACACCTACTCCAATAAGGACACACCTCCTAATAGCACCT  600

seq1  CTGCCTATGGCCAAGCATTCAAACACATCAGTCTGGGGGTGGGGCATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTATGGCCAAGCATTCAAACACATCAGTCTGGGGGTGGGGCATTTC  650

seq1  TAATCAAAGCACCACACATAGTCAGAGGACAGGACACAGAAGATCTGATT  700
      |||||||||||||||||||||||||||||| ||||||| |||||||| ||
seq2  TAATCAAAGCACCACACATAGTCAGAGGACTGGACACATAAGATCTGTTT  700

seq1  AGGCCATTAACCTCTCTGTTCAGGACAAGTTGTGGTAAAGTTATCCCCCA  750
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGGCCATTAACCTCTCTGTTCAGGACAAGTTGTGGTAAAGTTAT-CCCCA  749

seq1  CCCCAAATTCTTTGATTTTGTTGCTG-TGTTGAGATCTCCAATTTCTGGG  799
      |||| ||||||||||||||||||||| | ||| |||||||||||||||||
seq2  CCCC-AATTCTTTGATTTTGTTGCTGTTTTTGTGATCTCCAATTTCTGGG  798

seq1  TTCAGATGTT-CTTCACTGTTCTATGA-GGCCACAAAGTACTCA-GATTT  846
       ||||||||| |||||||||||||||| |||||| |||||||||  ||||
seq2  -TCAGATGTTCCTTCACTGTTCTATGAGGGCCAC-AAGTACTCATAATTT  846

seq1  CCAATGA  853
      |||||||
seq2  CCAATGA  853