BAC Information

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BAC

Clone NameB6Ng01-153O02
Chromosome10 (Build37)
Map Location 94,041,761 - 94,180,211
singlet/doubletdoublet
Overlap geneTmcc3, EG667315, 4921537D05Rik
Upstream geneCcdc38, Snrpf, LOC100041873, Ntn4, LOC667338, LOC100041907, Usp44, Metap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472, LOC100041955
Downstream genePlxnc1, Cradd, Socs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4, EG628119
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153O02.bB6Ng01-153O02.g
ACCDH949070DH949071
length1,1551,021
definitionDH949070|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O02, 5' end.DH949071|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,179,155 - 94,180,211)(94,041,761 - 94,042,788)
sequence
gaattccagtaagaggtggcaaagtaaaccgtacccacaaaacgaaagag
gccattcgacaacttcaggaacagtgtaccagagcagaaaaggacgtgta
ggagtgtttccagacaaagacaggagaacctcaagtgtaattaaccaact
ggtgaaagctagatgcaggcagctttccgagtttaaaaactccaggagga
tccagttttagtagttctcatactttgctgagttttacctcctggaacca
actgagttctcaaaataaatattagtcaaaaaaaatgttatgacaaagag
aagggcacggaagcactctgaaatacagtagcattctaatcttcttaaca
aagaaaaatctgtttaacttgcagcccactctatggtggtattaacagct
cctatgctctcatagaagaacagcagtaaaatctagcactctccagccat
tctctcccatatgaggaacagtgcaggagaccgaatgtcactaggaacat
ttctagctcaggagtacagttcatcaaaagtctgaggttaatcatagaac
ttatagaactctttccctctccccatgcttataaaagtatgtaacatagc
ttataataatgaaataatttataacactgtaatatttacttacactagaa
gtatatgtttgtgtattcctacgcttacacagaaatgtgaatttgttact
ccgtcctggggaggctgaaagaaagacatcaagagcctgtgaggccacta
tgatggagaatgtgtgatggaaagatggcaaagatggaaagttgagagat
ggaaaagaaagagaagccaaaggggctcatagactgtggagaaaggtgaa
actggagacttgatggcagtgaggaatagggagggaagaggccatggtga
ggtcttggtgtgggctgccaccaagggtcacgtctaggtccatgggccct
aatgtagctagggtctgtgttgatgtctgtggccaagaaaccaccaaaag
ctaagcaaatgtctgtggtctggactgcagcctgaagcccactgtgctga
gctggccccctctaccttgccagttacccccattcctggaaagcagtgcc
ccaccccacatgcctggctggcagatatgtgggggagctagcccgggaca
ctact
gaattccctggaagagttcaggcccgaagccagccccagggcttacggcg
gaagcgctaccatcgtgaacaaacctaagtacggcagcgatgacgaatgt
tctagtggcacatccggctcagcggacagcaatgggaaccagtcctttgg
ggctggtgggaccagcaccctggacagccaggggaagattgccaagatca
tggaggaactgagggagatcaaggttacccaaacccagctggcggaagac
atcgaggcactgaaggtgcagtttaagagagaatatggctttatctctca
gactctgcaagaggagagatacaggtacgtacatagaagtctccctctgg
gattccttttagaagcaggaagcagaaactgtctgctcacaagtgaagtg
ctaatgcatgtgtttgcaatagatacagatgtggatgcagagacatttaa
agattgataaattctttctatccttcatgatcctaagttccataatttcc
agtttataactgacaattagaggaagacattatatgcattgggtctctta
aaatattgttatccaagccatgactcacatgcctagtaagaaattgattc
agcagacgtctgtgatggcctcattacactaatttccctccatcatagca
ggcaagtggacttaattcgttggacaatgagacaatgaggtagactttta
tgtggtatgtcagtttgaaatatacatattttgttaattaagcttttgtt
aaaaaacacacacatggactggagggatgactccgtggataaagtgcttg
ccatgcaagaatgaagccatcagtccaggtacctgacacccatgcagatg
ctggacatgacagcacaggtctgtgtccatagcacttggggcagcagaga
caagcagatcctagctggaccttgctgggcagatcctagctggaccttgc
tgaccagtcagcctagtcaaggtcattgagaagaccaaaaacctggcatc
aaccttctgggctctcaccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_94179155_94180211
seq2: B6Ng01-153O02.b_129_1201 (reverse)

seq1  AGTAGTGT-CCAGGCTAGCTCACCCA-ATA-CTG-CAGCCA-GCA-GT-G  43
      |||||||| || ||||||||| |||| ||| ||| |||||| ||| || |
seq2  AGTAGTGTCCCGGGCTAGCTCCCCCACATATCTGCCAGCCAGGCATGTGG  50

seq1  GGTGGGGC-CTGCTCTCCA-GAAT-GTGGTGACT-GCCAGGTAGA-GGGG  88
      |||||||| ||||| |||| |||| | ||| ||| || ||||||| ||||
seq2  GGTGGGGCACTGCTTTCCAGGAATGGGGGTAACTGGCAAGGTAGAGGGGG  100

seq1  CCAGCTCAGCACAGTGG--CTCAGGCTGCAGTCCAGACCACAGACATTTG  136
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  CCAGCTCAGCACAGTGGGCTTCAGGCTGCAGTCCAGACCACAGACATTTG  150

seq1  CTTAGCTTTTGGTGGTTTCTTGGCCACAGACATCAACACAGACCCTAGCT  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTTTTGGTGGTTTCTTGGCCACAGACATCAACACAGACCCTAGCT  200

seq1  ACATTAGGG-CCATGGACCTAGACGTGACCCTTGGTGGCAGCCCACACCA  235
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGGGCCCATGGACCTAGACGTGACCCTTGGTGGCAGCCCACACCA  250

seq1  AGACCTCACCATGGCCTCTTTCCTCCCTATTCCTCACTGCCATCAAGTCT  285
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGACCTCACCATGGCCTCTTCCCTCCCTATTCCTCACTGCCATCAAGTCT  300

seq1  CCAGTTTCACCTTTCTCCACAGTCTATGAGCCCC-TTGGCTTCTCTTTCT  334
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCAGTTTCACCTTTCTCCACAGTCTATGAGCCCCTTTGGCTTCTCTTTCT  350

seq1  TTTCCATCTCTCAACTTTCCATCTTTGCCATCTTTCCATCACACATTCTC  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCTCTCAACTTTCCATCTTTGCCATCTTTCCATCACACATTCTC  400

seq1  CATCATAGTGGCCTCACAGGCTCTTGATGTCTTTCTTTCAGCCTCCCCAG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAGTGGCCTCACAGGCTCTTGATGTCTTTCTTTCAGCCTCCCCAG  450

seq1  GACGGAGTAACAAATTCACATTTCTGTGTAAGCGTAGGAATACACAAACA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGAGTAACAAATTCACATTTCTGTGTAAGCGTAGGAATACACAAACA  500

seq1  TATACTTCTAGTGTAAGTAAATATTACAGTGTTATAAATTATTTCATTAT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCTAGTGTAAGTAAATATTACAGTGTTATAAATTATTTCATTAT  550

seq1  TATAAGCTATGTTACATACTTTTATAAGCATGGGGAGAGGGAAAGAGTTC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCTATGTTACATACTTTTATAAGCATGGGGAGAGGGAAAGAGTTC  600

seq1  TATAAGTTCTATGATTAACCTCAGACTTTTGATGAACTGTACTCCTGAGC  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTTCTATGATTAACCTCAGACTTTTGATGAACTGTACTCCTGAGC  650

seq1  TAGAAATGTTCCTAGTGACATTCGGTCTCCTGCACTGTTCCTCATATGGG  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGTTCCTAGTGACATTCGGTCTCCTGCACTGTTCCTCATATGGG  700

seq1  AGAGAATGGCTGGAGAGTGCTAGATTTTACTGCTGTTCTTCTATGAGAGC  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGGCTGGAGAGTGCTAGATTTTACTGCTGTTCTTCTATGAGAGC  750

seq1  ATAGGAGCTGTTAATACCACCATAGAGTGGGCTGCAAGTTAAACAGATTT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGCTGTTAATACCACCATAGAGTGGGCTGCAAGTTAAACAGATTT  800

seq1  TTCTTTGTTAAGAAGATTAGAATGCTACTGTATTTCAGAGTGCTTCCGTG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTTAAGAAGATTAGAATGCTACTGTATTTCAGAGTGCTTCCGTG  850

seq1  CCCTTCTCTTTGTCATAACATTTTTTTTGACTAATATTTATTTTGAGAAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTCTTTGTCATAACATTTTTTTTGACTAATATTTATTTTGAGAAC  900

seq1  TCAGTTGGTTCCAGGAGGTAAAACTCAGCAAAGTATGAGAACTACTAAAA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGGTTCCAGGAGGTAAAACTCAGCAAAGTATGAGAACTACTAAAA  950

seq1  CTGGATCCTCCTGGAGTTTTTAAACTCGGAAAGCTGCCTGCATCTAGCTT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCCTCCTGGAGTTTTTAAACTCGGAAAGCTGCCTGCATCTAGCTT  1000

seq1  TCACCAGTTGGTTAATTACACTTGAGGTTCTCCTGTCTTTGTCTGGAAAC  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGTTGGTTAATTACACTTGAGGTTCTCCTGTCTTTGTCTGGAAAC  1050

seq1  ACTCCTACACGTCCTTTTCTGCT  1057
      |||||||||||||||||||||||
seq2  ACTCCTACACGTCCTTTTCTGCT  1073

seq1: chr10_94041761_94042788
seq2: B6Ng01-153O02.g_68_1088

seq1  GAATTCCCTGGAAGAGTTCAGGCCCGAAGCCAGCCCCAGGGCTTACGGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGGAAGAGTTCAGGCCCGAAGCCAGCCCCAGGGCTTACGGCG  50

seq1  GAAGCGCTACCATCGTGAACAAACCTAAGTACGGCAGCGATGACGAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGCTACCATCGTGAACAAACCTAAGTACGGCAGCGATGACGAATGT  100

seq1  TCTAGTGGCACATCCGGCTCAGCGGACAGCAATGGGAACCAGTCCTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGGCACATCCGGCTCAGCGGACAGCAATGGGAACCAGTCCTTTGG  150

seq1  GGCTGGTGGGACCAGCACCCTGGACAGCCAGGGGAAGATTGCCAAGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGGGACCAGCACCCTGGACAGCCAGGGGAAGATTGCCAAGATCA  200

seq1  TGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAACTGAGGGAGATCAAGGTTACCCAAACCCAGCTGGCGGAAGAC  250

seq1  ATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATATGGCTTTATCTCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGAGGCACTGAAGGTGCAGTTTAAGAGAGAATATGGCTTTATCTCTCA  300

seq1  GACTCTGCAAGAGGAGAGATACAGGTACGTACATAGAAGTCTCCCTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGCAAGAGGAGAGATACAGGTACGTACATAGAAGTCTCCCTCTGG  350

seq1  GATTCCTTTTAGAAGCAGGAAGCAGAAACTGTCTGCTCACAAGTGAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTTTTAGAAGCAGGAAGCAGAAACTGTCTGCTCACAAGTGAAGTG  400

seq1  CTAATGCATGTGTTTGCAATAGATACAGATGTGGATGCAGAGACATTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCATGTGTTTGCAATAGATACAGATGTGGATGCAGAGACATTTAA  450

seq1  AGATTGATAAATTCTTTCTATCCTTCATGATCCTAAGTTCCATAATTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGATAAATTCTTTCTATCCTTCATGATCCTAAGTTCCATAATTTCC  500

seq1  AGTTTATAACTGACAATTAGAGGAAGACATTATATGCATTGGGTCTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATAACTGACAATTAGAGGAAGACATTATATGCATTGGGTCTCTTA  550

seq1  AAATATTGTTATCCAAGCCATGACTCACATGCCTAGTAAGAAATTGATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGTTATCCAAGCCATGACTCACATGCCTAGTAAGAAATTGATTC  600

seq1  AGCAGACGTCTGTGATGGCCTCATTACACTAATTTCCCTCCATCATAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGACGTCTGTGATGGCCTCATTACACTAATTTCCCTCCATCATAGCA  650

seq1  GGCAAGTGGACTTAATTCGTTGGACAATGAGACAATGAGGTAGACTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTGGACTTAATTCGTTGGACAATGAGACAATGAGGTAGACTTTTA  700

seq1  TGTGGTATGTCAGTTTGAAATATACATATTTTGTTAATTAAGCTTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATGTCAGTTTGAAATATACATATTTTGTTAATTAAGCTTTTGTT  750

seq1  AAAAAACACACACATGGACTGGAGGGATGACTCCGTGGATAAAGTGCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACACACACATGGACTGGAGGGATGACTCCGTGGATAAAGTGCTTG  800

seq1  CCATGCAAGAATGAAGCCATCAGTCCAGGTACCTGACACCCATGCAGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCAAGAATGAAGCCATCAGTCCAGGTACCTGACACCCATGCAGATG  850

seq1  CTGGACATGACAGCACAGGTCTGTGTCCATAGCACTTGGGGCAGCAGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACATGACAGCACAGGTCTGTGTCCATAGCACTTGGGGCAGCAGAGA  900

seq1  CAAGCAGATCCTAGGCTGGACCTTGCTGGGCAGATCCTAGGCTGGACCTT  950
      ||||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  CAAGCAGATCCTA-GCTGGACCTTGCTGGGCAGATCCTA-GCTGGACCTT  948

seq1  GCTGACCAGTCAGCCTAGTCAGGGTCATTGAGAGACCCAAAACACCTGGC  1000
      ||||||||||||||||||||| |||||||||||   |||||| |||||||
seq2  GCTGACCAGTCAGCCTAGTCAAGGTCATTGAGAAGACCAAAA-ACCTGGC  997

seq1  ATCAACC-TCTGGCCTCTACACACACCCA  1028
      ||||||| ||||| ||||     ||||||
seq2  ATCAACCTTCTGGGCTCT-----CACCCA  1021