BAC Information

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BAC

Clone NameB6Ng01-154D09
Chromosome10 (Build37)
Map Location 104,587,134 - 104,588,336
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
Downstream geneTmtc2, EG627573, BC067068, Ccdc59, EG667758
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154D09.bB6Ng01-154D09.g
ACCDH949318DH949319
length1,2531,205
definitionDH949318|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D09, 5' end.DH949319|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattagctacagcccatga
gtcagtgtataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcaaggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcgtcagttgatcatagggaacacccccatgag
gctataggtgcatgcttggcagcagattgcattgtacaggagtagaaacc
ataggcatctgagcacttcttcatgtacttgcttgtgccttcaggacctg
ctctggcccgatcacgttatacccacttccatttgataatagaactgctg
ctgggccgttccacgtatgacttgcagttggatagtacccagctctatgg
tggtaggttcagtgcaatggactggggttcaatgtcgacgtcagattcca
ttaagtcattacagtcagaagagctgttttctcaaagggaaagataattg
gtc

gaattcctaatataaatgctttataaaagctatacagtattaactaggct
aatattaattaacattccatttacttttcttaaacatttttaaattattg
gaggtaatatttacccacatatggatatgtttattttaataagcacaaat
ttaggtacataaaacatatagaaataggatctttgggtcaaagctctgtg
catttcagatcagttaaagaagcccagatatttaattatgtcattttaca
cagagactattattttccaagacccctactttccatgaaactgaggatct
taaaaataacacactatggatgctcatctatattttctacctcatgtaat
ctaacataaatctgaaaaaagaaagcatttcataactttttagatttctc
tatgagttgtttttcagagatcagatgatactgtatgaaaatatctataa
tttttttagtgccccatggcatatgtttattcaagttagagtggaataag
gtgtagaatacagaagaaaatctcagacctgattcattgagaattttact
aatctacatagaaatttaatacatcgtcaccaacttctttaaattctcac
aaactaaaagaatgcttctcaccttcttcccagtgatcacattcatggga
aatatcataccataagtggtgctattctcctaaaaaacacattcgattta
agtttttatttgcattggtttcactgtgtaaggtgttactgtcagaaaca
gtattggctttctgtaaagcagccatcaaatgctgaacacttcaagaagt
ttgtatctaagcacttgtattctgcatctcactgagtcataaataaagga
aaaactcaaaatatttaaattcacattatagattctgactaatttataaa
aagaattgggacttttttcccattttttgaacataactcttcagtttagc
ttttatggggtaggcaagctatgagaattatttacagaggcattttatta
gctcttttatacttttatggtattcagcatattaatgtacccagtccact
agtaataaccacctcatatatttactgggccgggtactttctgatgaaaa
aattattcagggattactgctttgtatttgagagagtttaatttcaaagt
ggcatggatgagaaacatgacactccacaagtttctgggattaacatata
tctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104587134_104588336
seq2: B6Ng01-154D09.g_64_1268 (reverse)

seq1  TAAG-TATA-GTTAAAACTCCCAGAAA-ATGTTGA-TGTCATGGTTTCT-  45
      |||| |||| |||||   |||||||||  ||| || |||||| |||||| 
seq2  TAAGATATATGTTAA---TCCCAGAAACTTGTGGAGTGTCAT-GTTTCTC  46

seq1  ATCCATGCCAACATTTGAATATAAACTCT-TCAAATAC-AAGCAGTATAT  93
      ||||||||||   ||||||  |||||||| |||||||| |||||||| ||
seq2  ATCCATGCCA--CTTTGAAATTAAACTCTCTCAAATACAAAGCAGTA-AT  93

seq1  CACTG-ATAATTTTTTCATCAG-AAGTACTCCGCTCAGTTAAATATATTG  141
      | ||| |||||||||||||||| |||||| | || ||| |||||||||  
seq2  CCCTGAATAATTTTTTCATCAGAAAGTACCCGGCCCAG-TAAATATATGA  142

seq1  AGTAGTTATTACTTAGT-GACTGGGTACATTAATATGCTTGAATA-CATA  189
       || |||||||| |||| |||||||||||||||||||| |||||| ||||
seq2  GGTGGTTATTAC-TAGTGGACTGGGTACATTAATATGC-TGAATACCATA  190

seq1  AAAGTAT-AGAGAGCTAATAAAATGCCTCTGTAAATAATTCTCATAGCTT  238
      ||||||| | ||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATAAAAGAGCTAATAAAATGCCTCTGTAAATAATTCTCATAGCTT  240

seq1  GCCTACCCCATAAAAGCTAAACTGAAGAGTTATGTTCAAAAAATGGGAAA  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCCCATAAAAGCTAAACTGAAGAGTTATGTTCAAAAAATGGGAAA  290

seq1  AAAGTCCCAATTCTTTTTATAAATTAGTCAGAATCTATAATGTGAATTTA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCAATTCTTTTTATAAATTAGTCAGAATCTATAATGTGAATTTA  340

seq1  AATATTTTGAGTTTTTTCCTTATTTATGACTCAGTGAGATGCAGAATACA  388
      |||||||||||||||| | |||||||||||||||||||||||||||||||
seq2  AATATTTTGAGTTTTTCCTTTATTTATGACTCAGTGAGATGCAGAATACA  390

seq1  AGTGCTTAGATACAAACTTCTTGAAGTGTTCAGCATTTGATGGCTGCTTT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTAGATACAAACTTCTTGAAGTGTTCAGCATTTGATGGCTGCTTT  440

seq1  ACAGAAAGCCAATACTGTTTCTGACAGTAACACCTTACACAGTGAAACCA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGCCAATACTGTTTCTGACAGTAACACCTTACACAGTGAAACCA  490

seq1  ATGCAAATAAAAACTTAAATCGAATGTGTTTTTTAGGAGAATAGCACCAC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAATAAAAACTTAAATCGAATGTGTTTTTTAGGAGAATAGCACCAC  540

seq1  TTATGGTATGATATTTCCCATGAATGTGATCACTGGGAAGAAGGTGAGAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTATGATATTTCCCATGAATGTGATCACTGGGAAGAAGGTGAGAA  590

seq1  GCATTCTTTTAGTTTGTGAGAATTTAAAGAAGTTGGTGACGATGTATTAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTTTAGTTTGTGAGAATTTAAAGAAGTTGGTGACGATGTATTAA  640

seq1  ATTTCTATGTAGATTAGTAAAATTCTCAATGAATCAGGTCTGAGATTTTC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATGTAGATTAGTAAAATTCTCAATGAATCAGGTCTGAGATTTTC  690

seq1  TTCTGTATTCTACACCTTATTCCACTCTAACTTGAATAAACATATGCCAT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATTCTACACCTTATTCCACTCTAACTTGAATAAACATATGCCAT  740

seq1  GGGGCACTAAAAAAATTATAGATATTTTCATACAGTATCATCTGATCTCT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACTAAAAAAATTATAGATATTTTCATACAGTATCATCTGATCTCT  790

seq1  GAAAAACAACTCATAGAGAAATCTAAAAAGTTATGAAATGCTTTCTTTTT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACAACTCATAGAGAAATCTAAAAAGTTATGAAATGCTTTCTTTTT  840

seq1  TCAGATTTATGTTAGATTACATGAGGTAGAAAATATAGATGAGCATCCAT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTATGTTAGATTACATGAGGTAGAAAATATAGATGAGCATCCAT  890

seq1  AGTGTGTTATTTTTAAGATCCTCAGTTTCATGGAAAGTAGGGGTCTTGGA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTTATTTTTAAGATCCTCAGTTTCATGGAAAGTAGGGGTCTTGGA  940

seq1  AAATAATAGTCTCTGTGTAAAATGACATAATTAAATATCTGGGCTTCTTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAGTCTCTGTGTAAAATGACATAATTAAATATCTGGGCTTCTTT  990

seq1  AACTGATCTGAAATGCACAGAGCTTTGACCCAAAGATCCTATTTCTATAT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATCTGAAATGCACAGAGCTTTGACCCAAAGATCCTATTTCTATAT  1040

seq1  GTTTTATGTACCTAAATTTGTGCTTATTAAAATAAACATATCCATATGTG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATGTACCTAAATTTGTGCTTATTAAAATAAACATATCCATATGTG  1090

seq1  GGTAAATATTACCTCCAATAATTTAAAAATGTTTAAGAAAAGTAAATGGA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATATTACCTCCAATAATTTAAAAATGTTTAAGAAAAGTAAATGGA  1140

seq1  ATGTTAATTAATATTAGCCTAGTTAATACTGTATAGCTTTTATAAAGCAT  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATTAATATTAGCCTAGTTAATACTGTATAGCTTTTATAAAGCAT  1190

seq1  TTATATTAGGAATTC  1203
      |||||||||||||||
seq2  TTATATTAGGAATTC  1205


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