BAC Information

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BAC

Clone NameB6Ng01-155D17
Chromosome2 (Build37)10 (Build37)
Map Location 149,905,811 - 149,906,72482,036,841 - 82,037,286
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC433483, LOC383754, LOC100043593, LOC241715, Cst10, EG667048, C530025M09Rik, OTTMUSG00000015750
Downstream geneLOC279056, Zfp120, EG245174, 3300002I08Rik, LOC100043832, OTTMUSG00000015730, LOC668924, OTTMUSG00000015743, LOC545472, Cst7, 2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D17.bB6Ng01-155D17.g
ACCDH950072DH950073
length1,1351,004
definitionDH950072|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D17, 5' end.DH950073|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(149,905,811 - 149,906,724)(82,036,841 - 82,037,286)
sequence
gaattcagtaagaatgttgcctgttcagtgacattcagaattgcctctag
tattgtaagagagatagtaaaagaaatcaggcattactatctactaccta
gagttagaaatctcagggtaagcttagcaaagtatacttagaatcttcat
tacagtcaggtatggcagactgcattgcttattagtagaaagtccccaca
cacaaccacttaaaataatagccaagttactcccatatgcaggaatttac
aattatctaggaagaaggaaggttgtggtctaaggaggaatcagagtaga
tacttagaactatataggtatctgagttacattcatacacaggattttac
aatggcctaggtggaaggtggactatacaatagactagaattggaactat
ggcaagggcacaaagcccttgcccctgacttctaagattaagccaacctt
aggtggggcttaaccttttgatcccagttgttaacattacattttatccc
agttggttcatgccagttctttgaaggcattcctctgttttgtgtcagat
acttcaatgtaccttgccggctgtgatatcctactcctttgttttctgta
ttatataaaactgatgctcattttgagacaaatgacattcagatagagta
cactcccttgtgtccatatttgtttgtcatttcttgacaactctttgccc
acccgtaaccagaacctgagttttgcctgtggactgaggacccaagcttc
aggccaccagcactgcccacttatggaactaagaacttgctctgtcatag
ccatgccaatcataagatcaggaggtgatcacgcctaagagtggtttgag
tttgaatccttcatatgtcaatgggcaacttgttgggatcccatttccag
agatcctgtcagattctgtcatacctatctatgtgatagcagtgatctac
ctccattctatagctgattccccttccacccttaaatcagaggtcccttt
ttctgccctgtgtctgatccctgtctctggatctctgggtcactacttgt
aaactctgaccacactgcatgtagatctgctatgagaaatgagagctata
tcgcatttgatgaggaggtaatttgaaattgatgc
gaattcagaactcttcagctggggaacaggggtaccagtgagtacagctt
tacaaggtaagtctggtcttgaactttctaacgaaattcaagccagtcta
tcagaagtaaagtgggaaatagctttacaaggtacgtctggccttgaact
ttctaatgaaattcaagacagtctatcagaagtaaagtgggaaatagctt
tacaaggtatgtttggccttgaactttctctagtgttaggagcctttttg
ttccttttcacatgttatcaagtggttaaggcagggctgaaaattctgga
tgaaattcagggcaatctatcagaagtaaagcggggagagagagtaggag
caaagaggaaatatggtacacaaactaagtatacaggcctttccaagggt
cttgaacccgaggaaaagttgaggtcaggtaagaatacctggggagagat
tagaaggaaggaaaagaaaaaagaaaagaaaaaagatcaattagcggagg
tctctaggagaaggagcctatactcatcactagatgagctcaaggagcca
gctcttggtagctctgaatcagatgatgaattctcctctgaagaaacaga
cttggaggaagaagcagctcattatgagggaaaagggtagcagccagata
aaatgctagctaatcagttaaggaaaaagccaaaagcggctggcgaaggc
cagtttgctgcttggcctccgggcagtcggcttcaaggtcatagtgcact
ttatacaatgatagcaacctaaccttgatcattgtataaagatggccaaa
atagatgctataatgctgtcaccaagtctctgattatctgacatggtcta
aaaacccataatcacattacacacacacacacacacacacacaccagaaa
cactttatttaaaaaaaaaaacttacttctattacatcatctacatttct
agataatcctgtttggtgggatgcttccagtgagtgccaaatggtaaata
atgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_149905811_149906724
seq2: B6Ng01-155D17.b_288_1183

seq1  CAGGAATTTACAATTATCTAGGAAGAAGGAAGGTTGTGGTCTAAGGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTTACAATTATCTAGGAAGAAGGAAGGTTGTGGTCTAAGGAGGA  50

seq1  ATCAGAGTAGATACTTAGAACTATATAGGTATCTGAGTTACATTCATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTAGATACTTAGAACTATATAGGTATCTGAGTTACATTCATACA  100

seq1  CAGGATTTTACAATGGCCTAGGTGGAAGGTGGACTATACAATAGACTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTTTACAATGGCCTAGGTGGAAGGTGGACTATACAATAGACTAGA  150

seq1  ATTGGAACTATGGCAAGGGCACAAAGCCCTTGCCCCTGACTTCTAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAACTATGGCAAGGGCACAAAGCCCTTGCCCCTGACTTCTAAGATT  200

seq1  AAGCCAACCTTAGGTGGGGCTTAACCTTTTGATCCCAGTTGTTAACATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAACCTTAGGTGGGGCTTAACCTTTTGATCCCAGTTGTTAACATTA  250

seq1  CATTTTATCCCAGTTGGTTCATGCCAGTTCTTTGAAGGCATTCCTCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATCCCAGTTGGTTCATGCCAGTTCTTTGAAGGCATTCCTCTGTT  300

seq1  TTGTGTCAGATACTTCAATGTACCTTGCCGGCTGTGATATCCTACTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCAGATACTTCAATGTACCTTGCCGGCTGTGATATCCTACTCCTT  350

seq1  TGTTTTCTGTATTATATAAAACTGATGCTCATTTTGAGACAAATGACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTGTATTATATAAAACTGATGCTCATTTTGAGACAAATGACATT  400

seq1  CAGATAGAGTACACTCCCTTGTGTCCATATTTGTTTGTCATTTCTTGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGAGTACACTCCCTTGTGTCCATATTTGTTTGTCATTTCTTGACA  450

seq1  ACTCTTTGCCCACCCGTAACCAGAACCTGAGTTTTGCCTGTGGACTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTGCCCACCCGTAACCAGAACCTGAGTTTTGCCTGTGGACTGAGG  500

seq1  ACCCAAGCTTCAGGCCACCAGCACTGCCCACTTATGGAACTAAGAACTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGCTTCAGGCCACCAGCACTGCCCACTTATGGAACTAAGAACTTG  550

seq1  CTCTGTCATAGCCATGCCAATCATAAGATCAGGAGGTGATCACGCCTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCATAGCCATGCCAATCATAAGATCAGGAGGTGATCACGCCTAAG  600

seq1  AGTGGTTTGAGTTTGAATCCTTCATATGTCAATGGGCAACTTGTTGGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTTGAGTTTGAATCCTTCATATGTCAATGGGCAACTTGTTGGGAT  650

seq1  CCCATTTCCAGAGATCCTGTCAAGATTCTGTCATACCTATCTATGTGATA  700
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCATTTCCAGAGATCCTGTC-AGATTCTGTCATACCTATCTATGTGATA  699

seq1  GGCAGGTGAATCTACCTCCATTCTATAGCTGATTCCCCTTCCACCCTTAA  750
       ||| ||| ||||||||||||||||||||||||||||||||||||||| |
seq2  -GCA-GTG-ATCTACCTCCATTCTATAGCTGATTCCCCTTCCACCCTT-A  745

seq1  AATCAGAGGTCCCTTTTTCTGCCCTGTGTCTGATCCCTGTCCTCTGGATC  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATCAGAGGTCCCTTTTTCTGCCCTGTGTCTGATCCCTGT-CTCTGGATC  794

seq1  TCCTGGGTCACTACTTTGTAAACTTCTGACCACACTGCAATGTAAGGATC  850
      | |||||||||||| |||||||| |||||||||||||| |||||  ||||
seq2  T-CTGGGTCACTAC-TTGTAAAC-TCTGACCACACTGC-ATGTA--GATC  838

seq1  TGCTATGAGAAATGAGAGCTATACTGTCATTTGAGTGGAGGAAGGTAATT  900
      ||||||||||||||||||||||| |  |||||||   |||| |||||| |
seq2  TGCTATGAGAAATGAGAGCTATA-TCGCATTTGA--TGAGG-AGGTAA-T  883

seq1  TTGATATTTGATGC  914
      |||| | |||||||
seq2  TTGA-AATTGATGC  896

seq1: chr10_82036841_82037286
seq2: B6Ng01-155D17.g_67_513 (reverse)

seq1  TCTCCCCAGGTATTCTTACCTGACCTAAACTTTTCCTCGGGTTCAAGACC  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCTCCCCAGGTATTCTTACCTGACCTCAACTTTTCCTCGGGTTCAAGACC  50

seq1  CGTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCTC  100
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTGGAAAGGCCTGTATACTTAGTTTGTGTACCATATTTCCTCTTTGCTC  100

seq1  CTACTCTCTCTCCCCGCTTTACTTCTGATAGATTGCCCTGAATTTCATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTCTCTCCCCGCTTTACTTCTGATAGATTGCCCTGAATTTCATCC  150

seq1  AGAATTTTCAGCCCTGCCTTAACCGCTTGATAACATGTGAAAAGGAACAA  200
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AGAATTTTCAGCCCTGCCTTAACCACTTGATAACATGTGAAAAGGAACAA  200

seq1  AAAGGCTCCTAACACTAGAAAAAGTTCAAGGCCAAACATACCTTGTAAAG  250
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAGGCTCCTAACACTAGAGAAAGTTCAAGGCCAAACATACCTTGTAAAG  250

seq1  CTATTTCCCACTTTACTTCTGATAGACTGTCTTGAATTTCGTTAGAAAGT  300
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTATTTCCCACTTTACTTCTGATAGACTGTCTTGAATTTCATTAGAAAGT  300

seq1  TCAAGACCAGACTTACCTTGTAAAGCTATTTCCCACTTTACTTCTGATAG  350
      ||||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCAGACGTACCTTGTAAAGCTATTTCCCACTTTACTTCTGATAG  350

seq1  ACTGTCTTGAATTTCGTTAGAAAGTTCAAGACCAGACTTACCTTGTAAAG  400
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTTGAATTTCGTTAGAAAGTTCAAGACCAGACTTACCTTGTAAAG  400

seq1  CTATACTTACGGGTA-CCCTGTTCCCCAGCTGAAGAGTTCTGAATTC  446
      || |||| || |||| |||||||||||||||||||||||||||||||
seq2  CTGTACTCACTGGTACCCCTGTTCCCCAGCTGAAGAGTTCTGAATTC  447