BAC Information

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BAC

Clone NameB6Ng01-155E04
Chromosome10 (Build37)
Map Location 85,354,437 - 85,428,661
singlet/doubletdoublet
Overlap genePrdm4, Ascl4, D10Wsu52e, Bpil2
Upstream geneRfx4, Ric8b, Fhl4, AI597468, Mterfd3, Cry1, EG666974, Btbd11, EG626858, LOC626878, LOC669723, LOC626940, Pwp1
Downstream geneFbxo7, Syn3, Timp3, EG627035, LOC672902, LOC100041419, EG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155E04.bB6Ng01-155E04.g
ACCDH950094DH950095
length9931,087
definitionDH950094|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E04, 5' end.DH950095|Mus musculus domesticus DNA, BAC clone: B6Ng01-155E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,428,071 - 85,428,661)(85,354,437 - 85,355,543)
sequence
gaattcctaatcctgcttcgggctcctgagtgctgggtttagaagtgttc
actgtcatgcctggctacgtgcacagttttcagtagtgatttgtttttaa
tctttaaaaaaattaactttgaaaattaaaataaatctacttttgttgta
ttgcttcttcttattttgttgttattgttgttttgttttgtgtttttctt
ttttgaggcagggtttctctgtgtagccctggctgtcctggaactcactc
tgtagaccaggctgaccttgaatttaaagatccgcctgcctctgcctccc
aagtgctgggattaaatgtgtgcgtcaccttttttttttcaagacagggt
ttctctgtgtagcctttgactgtcctggaactcactctggagaccaggct
ggcctcgaactcagaaatccacctgtctctgcctcccaagtgctgggatt
aaaggcgtgcaccaccacgcccggcttctttggatcccctggaactaaag
ttacaaatggctttgactcaccatgtgggtgatggggaatcgaaccctgg
tcctctgcaagagcaacaacagttcttaactcttaactgctgaaccatct
atccacccccatgaatctaccttcctttaacctcctcctgtttcctttca
gattccgcctgtctttgccagagaacagccaacgagatgctaaggtagga
atgcaagctctcagagtaccccgagaaaggcatgagaaccagaattcctc
tgtactgtagcctgtgcatgttgctgtccatggtttctccacggttctaa
gttttagctttggaatttattcatttatttgggttgattttacagcacag
gggattgaacctggggcctttatgtactcatctatttataatttaatccc
ctgagcttagcaatatacttttactcgtttagatatattggagtatgtgt
atgctttgcaatgagttggggctgcaatagtgaccaatatata
gaattcaccccgagtaaagggagaaaccacttggaacactaatggtgcta
ccgtagtattagcagccacccccagctctggccttcaagctgctagtttc
caaggagacagtaaagccccaccttaagagggtgggggggagaggctaca
aacccaggtgcagtccgagcactgcacagaaacaatcagggtatgatctc
aaagccaaaactaagaaatgctttcttttaaccttcaagtccttcttcca
caaaagatcatgacaaattccatattttcattaaaaatgattttaattct
tcctagaggaatacaggtttgaatgaaatacattcattctataaatacat
tagcagcaaaaccttgccagcagagtcctctactcaagcctttgagcagg
aagacgtgttccatcaatcctgtcaagttcagggtgtccgcttctggaga
aaagctgggtgtgcctgctcacagggagtgactaataagccttctcatct
tccaattcctttggtatcctctacactcagctggtgaggaccttcagcaa
caaggaagacaactgggaaggcctaactgaaacccacaatgcatttggaa
ctacttgttgctttcagctagcaacattttaatggttttcataaagtaaa
cctacatttcaaaaaagaaagaaagaaaacaaaccatcattccgatcctt
cctcctgtgggcagaagaaccgatctcgtgatctcgtcaggcgagcccat
gtgcacttgctgactagagactacccagcatgtattatctcaacactgtt
aatgttctaggtcctctctgaaagactgaaggctttcctaaagagacaag
gctagatcacaaagatgtgcatacacataaccacgtggctaaccttggct
tctatcagaggtgggctctggaccttttcctctatcagtcactgtcctct
gatcacggctgctgctttactgcctctcaccctgctgagactgagcagca
tgagccagaagtaggcagtggtcttttactattacagcctcctaccttgc
acggcgttacttacatcagtgctaatgtgtggatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_85428071_85428661
seq2: B6Ng01-155E04.b_46_636 (reverse)

seq1  AGCAGTTAAGAGTTAAGAACTGTTGTTGCTCTTGCAGAGGACCAGGGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTAAGAGTTAAGAACTGTTGTTGCTCTTGCAGAGGACCAGGGTTC  50

seq1  GATTCCCCATCACCCACATGGTGAGTCAAAGCCATTTGTAACTTTAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCCATCACCCACATGGTGAGTCAAAGCCATTTGTAACTTTAGTTC  100

seq1  CAGGGGATCCAAAGAAGCCGGGCGTGGTGGTGCACGCCTTTAATCCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGATCCAAAGAAGCCGGGCGTGGTGGTGCACGCCTTTAATCCCAGC  150

seq1  ACTTGGGAGGCAGAGACAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGAGGCAGAGACAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTC  200

seq1  TCCAGAGTGAGTTCCAGGACAGTCAAAGGCTACACAGAGAAACCCTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGTGAGTTCCAGGACAGTCAAAGGCTACACAGAGAAACCCTGTCT  250

seq1  TGAAAAAAAAAAGGTGACGCACACATTTAATCCCAGCACTTGGGAGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAAAAAAGGTGACGCACACATTTAATCCCAGCACTTGGGAGGCAG  300

seq1  AGGCAGGCGGATCTTTAAATTCAAGGTCAGCCTGGTCTACAGAGTGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCGGATCTTTAAATTCAAGGTCAGCCTGGTCTACAGAGTGAGTT  350

seq1  CCAGGACAGCCAGGGCTACACAGAGAAACCCTGCCTCAAAAAAGAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGCCAGGGCTACACAGAGAAACCCTGCCTCAAAAAAGAAAAAC  400

seq1  ACAAAACAAAACAACAATAACAACAAAATAAGAAGAAGCAATACAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAACAATAACAACAAAATAAGAAGAAGCAATACAACAAA  450

seq1  AGTAGATTTATTTTAATTTTCAAAGTTAATTTTTTTAAAGATTAAAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATTTATTTTAATTTTCAAAGTTAATTTTTTTAAAGATTAAAAACA  500

seq1  AATCACTACTGAAAACTGTGCACGTAGCCAGGCATGACAGTGAACACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTACTGAAAACTGTGCACGTAGCCAGGCATGACAGTGAACACTTC  550

seq1  TAAACCCAGCACTCAGGAGCCCGAAGCAGGATTAGGAATTC  591
      |||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCAGCACTCAGGAGCCCGAAGCAGGATTAGGAATTC  591

seq1: chr10_85354437_85355543
seq2: B6Ng01-155E04.g_67_1153

seq1  GAATTCACCCCGAGTAAAGGGAGAAACCACTTGGAACACTAATGGTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCCGAGTAAAGGGAGAAACCACTTGGAACACTAATGGTGCTA  50

seq1  CCGTAGTATTAGCAGCCACCCCCAGCTCTGGCCTTCAAGCTGCTAGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTAGTATTAGCAGCCACCCCCAGCTCTGGCCTTCAAGCTGCTAGTTTC  100

seq1  CAAGGAGACAGTAAAGCCCCACCTTAAGAGGGTGGGGGGGAGAGGCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGACAGTAAAGCCCCACCTTAAGAGGGTGGGGGGGAGAGGCTACA  150

seq1  AACCCAGGTGCAGTCCGAGCACTGCACAGAAACAATCAGGGTATGATCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGTGCAGTCCGAGCACTGCACAGAAACAATCAGGGTATGATCTC  200

seq1  AAAGCCAAAACTAAGAAATGCTTTCTTTTAACCTTCAAGTCCTTCTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAAAACTAAGAAATGCTTTCTTTTAACCTTCAAGTCCTTCTTCCA  250

seq1  CAAAAGATCATGACAAATTCCATATTTTCATTAAAAATGATTTTAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATCATGACAAATTCCATATTTTCATTAAAAATGATTTTAATTCT  300

seq1  TCCTAGAGGAATACAGGTTTGAATGAAATACATTCATTCTATAAATACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAGGAATACAGGTTTGAATGAAATACATTCATTCTATAAATACAT  350

seq1  TAGCAGCAAAACCTTGCCAGCAGAGTCCTCTACTCAAGCCTTTGAGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCAAAACCTTGCCAGCAGAGTCCTCTACTCAAGCCTTTGAGCAGG  400

seq1  AAGACGTGTTCCATCAATCCTGTCAAGTTCAGGGTGTCCGCTTCTGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGTGTTCCATCAATCCTGTCAAGTTCAGGGTGTCCGCTTCTGGAGA  450

seq1  AAAGCTGGGTGTGCCTGCTCACAGGGAGTGACTAATAAGCCTTCTCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGGGTGTGCCTGCTCACAGGGAGTGACTAATAAGCCTTCTCATCT  500

seq1  TCCAATTCCTTTGGTATCCTCTACACTCAGCTGGTGAGGACCTTCAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTCCTTTGGTATCCTCTACACTCAGCTGGTGAGGACCTTCAGCAA  550

seq1  CAAGGAAGACAACTGGGAAGGCCTAACTGAAACCCACAATGCATTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGACAACTGGGAAGGCCTAACTGAAACCCACAATGCATTTGGAA  600

seq1  CTACTTGTTGCTTTCAGCTAGCAACATTTTAATGGTTTTCATAAAGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGTTGCTTTCAGCTAGCAACATTTTAATGGTTTTCATAAAGTAAA  650

seq1  CCTACATTTCAAAAAAGAAAGAAAGAAAACAAACCATCATTCCGATCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATTTCAAAAAAGAAAGAAAGAAAACAAACCATCATTCCGATCCTT  700

seq1  CCTCCTGTGGGCAGAAGAACCGATCTCGTGATCTCGTCAGGCGAGCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGTGGGCAGAAGAACCGATCTCGTGATCTCGTCAGGCGAGCCCAT  750

seq1  GTGCACTTGCTGACTAGAGACTACCCAGCATGTATTATCTCAACACTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTTGCTGACTAGAGACTACCCAGCATGTATTATCTCAACACTGTT  800

seq1  AATGTTCTAGGTCCTCTCTGAAAGACTGAAGGCTTTCCTAAAGAGACAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCTAGGTCCTCTCTGAAAGACTGAAGGCTTTCCTAAAGAGACAAG  850

seq1  GCTAGATCACAAAGATGTGCATACACATAACCACGTGGCTAACCTTGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGATCACAAAGATGTGCATACACATAACCACGTGGCTAACCTTGGCT  900

seq1  TCTATCAGAGGTGGGCTTCTGGACCTTTTCCTCTATCAGTCACTGTCCTC  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTATCAGAGGTGGGC-TCTGGACCTTTTCCTCTATCAGTCACTGTCCTC  949

seq1  TGATCCACGCCTGCTGCTTTACCTGCCCTCTCAACCCCTGCTGAGACTGA  1000
      |||| |||| ||||||||||| ||| |||||||  |||||||||||||||
seq2  TGAT-CACGGCTGCTGCTTTA-CTG-CCTCTCA--CCCTGCTGAGACTGA  994

seq1  GGCAGCAGGAGCCAGAAGGTAGGCAGGTGTTCCTTTTTAACTAATTACAG  1050
       |||||| ||||||||| ||||||| ||| ||   ||| ||| |||||| 
seq2  -GCAGCATGAGCCAGAA-GTAGGCA-GTGGTC---TTTTACT-ATTACA-  1036

seq1  GCCTCCTAACACTTGCACGGCGGTTACCTTACATCAGTGCTTAATGTGTG  1100
      ||||||||   |||||||||| |||| ||||||||||||| |||||||| 
seq2  GCCTCCTA--CCTTGCACGGC-GTTA-CTTACATCAGTGC-TAATGTGT-  1080

seq1  GGATGCA  1107
      |||||||
seq2  GGATGCA  1087