BAC Information

Click to search

BAC

Clone NameB6Ng01-155J05
Chromosome10 (Build37)
Map Location 89,741,075 - 89,877,915
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneGas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155J05.bB6Ng01-155J05.g
ACCDH950321DH950322
length1,197872
definitionDH950321|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J05, 5' end.DH950322|Mus musculus domesticus DNA, BAC clone: B6Ng01-155J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,741,075 - 89,742,292)(89,877,044 - 89,877,915)
sequence
gaattccagggcagctaagattatacagagaaataatttggggggaaaaa
agactcacacagacaaaagacaaccaaaataacatagattttagctggaa
tatattgcataaaataatgcaagaggcatccagtcagaccctgtttgcat
tcccagcagatgcaataggcacccaagtagacccttcctacatttccatc
tgcattcattactgcctaacaacacacccgttctgtgagggcagcttact
cttccacatctatagagagcatggagggaaacttcacaccattaaatcac
acagtttatgcttttaatttccatctaacttgttagttagtgactgtctc
ctgtgtctctctacctgtgcataaagagaataaaaagagtattgggattg
ctaagagctatgccatgatcagagtgaattaggtgagcagttcattcctt
ttgaagattaactgacatttaatcataggcatctatggggatcctgggtt
atcattacagcagaagtactttgataaagcatgggagagaacattttgtc
taagtcttgagacacagtgatacagaaatgtttccaaacctccataaatt
catgttatttttacttaattattttccttaggagatcctgttggatccgt
gttgttattttagaattttaacatcactactaattaatgcttattttcct
ccaagtagcttttatgaatgtttatagtctcattataaaatcgaataaat
tatcttaatactttcgcttaagacatacaaagtaaaatttaaaaaaaaat
ctttataccctacttgtcagagcaacaaacattctagcctactttctttt
tctattttttttttctgtgcatattttcacatatatatgaaggtttggta
tacaggcatttgctttgtattcacctttaaattaaacatggttctaagta
ttgaaatataacatgtgctatcagctcacagatctgtaggattttgatag
cagacccttgaccctattttctccatctggtacatcaaactaaaagtgac
ggataatgcagattatagcccagcattgtgaaagcaggatatttacatgc
tcaactagagctcagtggactgtattgtagtcagctattgccttgtttaa
gaatggggcaaggcatggacgaatgcaccttatggcatggcctgaag
gaattcatttgccatgttaaaaacaaaatgtacttgctgtctttttctaa
gaatcaccgggctgaggtcatgaaatggcaatcatgggataatcaaaaca
gaacttggggtacatgactgaattgatatacaaataaaagactgggcttt
tggtctgcatgagatgagatagtagagagtgacagaaattattttttaga
atttttttctagtaaatgctgagctgtctagagatctctggagaatgaat
atattgttcttttaaaaatttgttttctaacaggatttctgaccttggtc
agaaatactaaaaattacttagagagctaacatagctcttttagaatatt
ttctagcagctacctagagggaacttcttggaaaatgagcatagctttaa
tagaatttttctagaaaatctaagaatattttatagcagcttttctgact
ttggtcagaaaacccatgagctatccggagagtttttagaaatttttcta
gcatgaaacagcagaaagttatctcaaatagactgcagagccaagagcta
tctacagagagctgtttagggagtcatttcaagcagactacacggctgtc
agcttgcacccaatcatttgactttgagtcatttctttcactacttgcaa
taccccttcctcaggacccccaactaagcagaggctggtccttggcagct
gttgttttggtttttttttttttgtttgttgttttgttttaacttggagt
tctgcaaattagagccaggttctttgcttgcaatgtaaacactgtactaa
gtgaacttctggcctgataaaataggattttgccataatatgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_89741075_89742292
seq2: B6Ng01-155J05.b_51_1247

seq1  GAATTCCAGGGCAGCTAAGATTATACAGAGAAATAATTTGGGGGGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCAGCTAAGATTATACAGAGAAATAATTTGGGGGGAAAAA  50

seq1  AGACTCACACAGACAAAAGACAACCAAAATAACATAGATTTTAGCTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCACACAGACAAAAGACAACCAAAATAACATAGATTTTAGCTGGAA  100

seq1  TATATTGCATAAAATAATGCAAGAGGCATCCAGTCAGACCCTGTTTGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGCATAAAATAATGCAAGAGGCATCCAGTCAGACCCTGTTTGCAT  150

seq1  TCCCAGCAGATGCAATAGGCACCCAAGTAGACCCTTCCTACATTTCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCAGATGCAATAGGCACCCAAGTAGACCCTTCCTACATTTCCATC  200

seq1  TGCATTCATTACTGCCTAACAACACACCCGTTCTGTGAGGGCAGCTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCATTACTGCCTAACAACACACCCGTTCTGTGAGGGCAGCTTACT  250

seq1  CTTCCACATCTATAGAGAGCATGGAGGGAAACTTCACACCATTAAATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACATCTATAGAGAGCATGGAGGGAAACTTCACACCATTAAATCAC  300

seq1  ACAGTTTATGCTTTTAATTTCCATCTAACTTGTTAGTTAGTGACTGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTATGCTTTTAATTTCCATCTAACTTGTTAGTTAGTGACTGTCTC  350

seq1  CTGTGTCTCTCTACCTGTGCATAAAGAGAATAAAAAGAGTATTGGGATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTCTCTACCTGTGCATAAAGAGAATAAAAAGAGTATTGGGATTG  400

seq1  CTAAGAGCTATGCCATGATCAGAGTGAATTAGGTGAGCAGTTCATTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGCTATGCCATGATCAGAGTGAATTAGGTGAGCAGTTCATTCCTT  450

seq1  TTGAAGATTAACTGACATTTAATCATAGGCATCTATGGGGATCCTGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATTAACTGACATTTAATCATAGGCATCTATGGGGATCCTGGGTT  500

seq1  ATCATTACAGCAGAAGTACTTTGATAAAGCATGGGAGAGAACATTTTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTACAGCAGAAGTACTTTGATAAAGCATGGGAGAGAACATTTTGTC  550

seq1  TAAGTCTTGAGACACAGTGATACAGAAATGTTTCCAAACCTCCATAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTGAGACACAGTGATACAGAAATGTTTCCAAACCTCCATAAATT  600

seq1  CATGTTATTTTTACTTAATTATTTTCCTTAGGAGATCCTGTTGGATCCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATTTTTACTTAATTATTTTCCTTAGGAGATCCTGTTGGATCCGT  650

seq1  GTTGTTATTTTAGAATTTTAACATCACTACTAATTAATGCTTATTTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATTTTAGAATTTTAACATCACTACTAATTAATGCTTATTTTCCT  700

seq1  CCAAGTAGCTTTTATGAATGTTTATAGTCTCATTATAAAATCGAATAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAGCTTTTATGAATGTTTATAGTCTCATTATAAAATCGAATAAAT  750

seq1  TATCTTAATACTTTCGCTTAAGACATACAAAGTAAAATTTAAAAAAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAATACTTTCGCTTAAGACATACAAAGTAAAATTTAAAAAAAAAT  800

seq1  CTTTATACCCTACTTGTCAGAGCAACAAACATTCTAGCCTAC-TTCTTTT  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTTATACCCTACTTGTCAGAGCAACAAACATTCTAGCCTACTTTCTTTT  850

seq1  TCTATTTTTTTTTTCTGTGCATATTTTCACATATATATGAAGGTTTGGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTTTTTTTCTGTGCATATTTTCACATATATATGAAGGTTTGGTA  900

seq1  TACAGGCATTTGCTTTGTATTCACCTTTAAATTAAACATGGTTCTAAGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCATTTGCTTTGTATTCACCTTTAAATTAAACATGGTTCTAAGTA  950

seq1  TTGAAATATAACATGTGCTATCAGCCTCACAAGATCTGTAAGGATTTTGA  999
      |||||||||||||||||||||||| ||||| |||||||| ||||||||||
seq2  TTGAAATATAACATGTGCTATCAG-CTCAC-AGATCTGT-AGGATTTTGA  997

seq1  TAGCAGAACCCTTGACCCTATTTTCTCCCATCTGGTACATCAAACTAAAA  1049
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  TAGCAG-ACCCTTGACCCTATTTTCT-CCATCTGGTACATCAAACTAAAA  1045

seq1  GTGACGGATAAATGCAGAATTATAAGCCCAGCATTGTGAAAAGCAAGATA  1099
      ||||||||| ||||||| ||||| |||||||||||||| |||||| ||||
seq2  GTGACGGAT-AATGCAG-ATTAT-AGCCCAGCATTGTG-AAAGCAGGATA  1091

seq1  TTTACATGCTCAACTAGAAGCTCAGTGGGACCTGTATGGTAGTTCAGCTA  1149
      ||||||||||||||||| ||||||||||   |||||| |||| |||||||
seq2  TTTACATGCTCAACTAG-AGCTCAGTGG--ACTGTATTGTAG-TCAGCTA  1137

seq1  ATGGCTTGTCTAAGAAATGGGGGCACAGCCATGGACAGAATGCACACTTA  1199
       || ||||| ||||||   |||||| || ||||||| |||||||| ||||
seq2  TTGCCTTGTTTAAGAA--TGGGGCA-AGGCATGGAC-GAATGCAC-CTTA  1182

seq1  TGGGCAATGGGGCCTGAAG  1218
      | ||||    |||||||||
seq2  T-GGCA---TGGCCTGAAG  1197

seq1: chr10_89877044_89877915
seq2: B6Ng01-155J05.g_68_939 (reverse)

seq1  CACACACACACACACACACACACACACACACATATTATGGCAAAATCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACATATTATGGCAAAATCCTA  50

seq1  TTTTATCAGGCCAGAAGTTCACTTAGTACAGTGTTTACATTGCAAGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAGGCCAGAAGTTCACTTAGTACAGTGTTTACATTGCAAGCAAA  100

seq1  GAACCTGGCTCTAATTTGCAGAACTCCAAGTTAAAACAAAACAACAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGGCTCTAATTTGCAGAACTCCAAGTTAAAACAAAACAACAAACA  150

seq1  AAAAAAAAAAAACCAAAACAACAGCTGCCAAGGACCAGCCTCTGCTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAACCAAAACAACAGCTGCCAAGGACCAGCCTCTGCTTAGT  200

seq1  TGGGGGTCCTGAGGAAGGGGTATTGCAAGTAGTGAAAGAAATGACTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTCCTGAGGAAGGGGTATTGCAAGTAGTGAAAGAAATGACTCAAA  250

seq1  GTCAAATGATTGGGTGCAAGCTGACAGCCGTGTAGTCTGCTTGAAATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATGATTGGGTGCAAGCTGACAGCCGTGTAGTCTGCTTGAAATGAC  300

seq1  TCCCTAAACAGCTCTCTGTAGATAGCTCTTGGCTCTGCAGTCTATTTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAACAGCTCTCTGTAGATAGCTCTTGGCTCTGCAGTCTATTTGAG  350

seq1  ATAACTTTCTGCTGTTTCATGCTAGAAAAATTTCTAAAAACTCTCCGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTCTGCTGTTTCATGCTAGAAAAATTTCTAAAAACTCTCCGGAT  400

seq1  AGCTCATGGGTTTTCTGACCAAAGTCAGAAAAGCTGCTATAAAATATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATGGGTTTTCTGACCAAAGTCAGAAAAGCTGCTATAAAATATTCT  450

seq1  TAGATTTTCTAGAAAAATTCTATTAAAGCTATGCTCATTTTCCAAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTCTAGAAAAATTCTATTAAAGCTATGCTCATTTTCCAAGAAGT  500

seq1  TCCCTCTAGGTAGCTGCTAGAAAATATTCTAAAAGAGCTATGTTAGCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTAGGTAGCTGCTAGAAAATATTCTAAAAGAGCTATGTTAGCTCT  550

seq1  CTAAGTAATTTTTAGTATTTCTGACCAAGGTCAGAAATCCTGTTAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTAATTTTTAGTATTTCTGACCAAGGTCAGAAATCCTGTTAGAAAA  600

seq1  CAAATTTTTAAAAGAACAATATATTCATTCTCCAGAGATCTCTAGACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTTAAAAGAACAATATATTCATTCTCCAGAGATCTCTAGACAGC  650

seq1  TCAGCATTTACTAGAAAAAAATTCTAAAAAATAATTTCTGTCACTCTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATTTACTAGAAAAAAATTCTAAAAAATAATTTCTGTCACTCTCTA  700

seq1  CTATCTCATCTCATGCAGACCAAAAGCCCAGTCTTTTATTTGTATATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCATCTCATGCAGACCAAAAGCCCAGTCTTTTATTTGTATATCAA  750

seq1  TTCAGTCATGTACCCCAAGTTCTGTTTTGATTATCCCATGATTGCCATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCATGTACCCCAAGTTCTGTTTTGATTATCCCATGATTGCCATTT  800

seq1  CATGACCTCAGCCCGGTGATTCTTAGAAAAAGACAGCAAGTACATTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTCAGCCCGGTGATTCTTAGAAAAAGACAGCAAGTACATTTTGT  850

seq1  TTTTAACATGGCAAATGAATTC  872
      ||||||||||||||||||||||
seq2  TTTTAACATGGCAAATGAATTC  872