BAC Information

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BAC

Clone NameB6Ng01-156K13
Chromosome13 (Build37)10 (Build37)
Map Location 109,868,745 - 109,869,708104,054,131 - 104,054,428
singlet/doubletsingletsinglet
Overlap genePde4d
Upstream geneNdufa12l, Ercc8, LOC668123, LOC621498, Elovl7, LOC668129, LOC100040524, Depdc1b, EG668144, LOC621663
Downstream geneLOC100040968, LOC100040577, Rab3c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156K13.bB6Ng01-156K13.g
ACCDH951104DH951105
length961971
definitionDH951104|Mus musculus domesticus DNA, BAC clone: B6Ng01-156K13, 5' end.DH951105|Mus musculus domesticus DNA, BAC clone: B6Ng01-156K13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(109,868,745 - 109,869,708)(104,054,131 - 104,054,428)
sequence
gaattccatatttgatgtaactctgtcttaaatccaaactctgagtattt
aaaacagttaaagcttcctactaagaaaaaaatattaaagcaaaatagat
tatgctagtattgacattaaaattctaatatacaataggtttataaatat
gatggtctacccatcatagctagttgcacttcctgtcatagtataacata
tcctgattgctacctgtcatgtaaagatgtctagaagctccacagtttag
gagggacttaatttataggagtaatctggaagactcaaactccatatgat
aaatccagtaccacaaggcatgggagattctaaaaatccacacttggtct
tctgaccaccttagaggaacttctactttattgattcttgttaggtatac
ccaaagatttggggttgactctttctagaccatatatatacaacagtctc
acatgacaacatacatgctattttgttagtggtgttttaccaaacttggc
cagatgctagagccaaaagagatctcactgaaggtatatgtaatagaata
cacatttcagaacaagaaaatttactaaaataataatgtatggtcatagc
caaccataggactgagcaccgggaatccaatggaggagttaggggaagga
ctgaaggagctaaatcagtttgcaaccctaataggaagaacaacaatatc
aacaaccagatccctcagagttcccagggactaaattgccaaccaaagag
tacatatggagggacctatacctcccgctgcatacatagcagagtatggc
tttatctggcatcattgggagggaaggcccatggtcctgtggaggcttaa
tgccttagcataggggaatgctatggaagtgaggcagaagtgagtatgtt
ggtggagagcaccctcatagttgcatgtagatgggaaataggatagggaa
ttgcaagggaa
gaattcaagaaggtggactccagaaaatcaaataacctcattaaaaagtg
gggctcagtgctaaacaaagaactctcacctgagaaataccaaatggctg
agaagcacctgaaaaaatgttcagcatccttaatcatcagggaactgcaa
ctcaaaacaaccctgagattccatctcacaccagtcagaatggctaagat
ctaaaattcaggtgacagcaattgctggcgaggatgtgggggaagaggaa
cactcctccattgttggtgggattgtaagcttgtacaaccactctggaaa
tcagttttagtttttaactatttggattatttcagttagcatcatgttat
atgttgtcgcttatagagggattcctttttttctttcttaaagctgactg
atactgcatttgtatatgtgtttaagtatttttatacaatttcctttatg
catttgtttatgaaaagttaaactgatacccaaggttggttattgagagt
attgtgaacagatgaacgcggatgtcttttcggggtatagacttcattgt
cttctgacgtgtcttctaaagtgaagtcactggattaaatgaacttggct
ttacctttagaggtatttcctctctttcccccataatggatgtcttgttt
ctgtgtatgcttttatattatagaagatagaatttccttttctctacagc
cttgaaaccactgatcttgtgtcttctttaatgctatccttactaatagg
catgagatttctttatgattttaatttgcatttttagatgactggtagta
ttgaactttttttaatgttcttgttgggtaattccaggttttggtttgag
aataggacattgaaaacaattcacttttttttttaaagtgctggctattc
tcctgctatggagttgttgagtccctatgtatctgaacataaacttatct
gctgtagtctcccacaccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_109868745_109869708
seq2: B6Ng01-156K13.b_45_1005 (reverse)

seq1  TCCCCTCTGCAATTCCCCTATCCTATTTCCCATCTCCCTGCAACTATGAG  50
      | |||| ||||||| |||||||||||||||||||| | ||||||||||||
seq2  TTCCCT-TGCAATT-CCCTATCCTATTTCCCATCTACATGCAACTATGAG  48

seq1  GGTGCTCCTCCACCCACATACTCACTTCTGCCTCACTTCCATAGCATTCC  100
      |||||| ||||||| |||||||||||||||||||||||||||||||||||
seq2  GGTGCT-CTCCACCAACATACTCACTTCTGCCTCACTTCCATAGCATTCC  97

seq1  CCTATGCTAAGGCATTAAGCCTCCACAGGACCATGGGCCTTCCCTCCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCTAAGGCATTAAGCCTCCACAGGACCATGGGCCTTCCCTCCCAA  147

seq1  TGATGCCAGATAAAGCCATACTCTGCTATGTATGCAGCGGGAGGTATAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCAGATAAAGCCATACTCTGCTATGTATGCAGCGGGAGGTATAGG  197

seq1  TCCCTCCATATGTACTCTTTGGTTGGCAATTTAGTCCCTGGGAACTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCATATGTACTCTTTGGTTGGCAATTTAGTCCCTGGGAACTCTGA  247

seq1  GGGATCTGGTTGTTGATATTGTTGTTCTTCCTATTAGGGTTGCAAACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGGTTGTTGATATTGTTGTTCTTCCTATTAGGGTTGCAAACTGA  297

seq1  TTTAGCTCCTTCAGTCCTTCCCCTAACTCCTCCATTGGATTCCCGGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCCTTCAGTCCTTCCCCTAACTCCTCCATTGGATTCCCGGTGCT  347

seq1  CAGTCCTATGGTTGGCTATGACCATACATTATTATTTTAGTAAATTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTATGGTTGGCTATGACCATACATTATTATTTTAGTAAATTTTCT  397

seq1  TGTTCTGAAATGTGTATTCTATTACATATACCTTCAGTGAGATCTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGAAATGTGTATTCTATTACATATACCTTCAGTGAGATCTCTTTT  447

seq1  GGCTCTAGCATCTGGCCAAGTTTGGTAAAACACCACTAACAAAATAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAGCATCTGGCCAAGTTTGGTAAAACACCACTAACAAAATAGCAT  497

seq1  GTATGTTGTCATGTGAGACTGTTGTATATATATGGTCTAGAAAGAGTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTGTCATGTGAGACTGTTGTATATATATGGTCTAGAAAGAGTCAA  547

seq1  CCCCAAATCTTTGGGTATACCTAACAAGAATCAATAAAGTAGAAGTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATCTTTGGGTATACCTAACAAGAATCAATAAAGTAGAAGTTCCT  597

seq1  CTAAGGTGGTCAGAAGACCAAGTGTGGATTTTTAGAATCTCCCATGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTGGTCAGAAGACCAAGTGTGGATTTTTAGAATCTCCCATGCCTT  647

seq1  GTGGTACTGGATTTATCATATGGAGTTTGAGTCTTCCAGATTACTCCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTACTGGATTTATCATATGGAGTTTGAGTCTTCCAGATTACTCCTAT  697

seq1  AAATTAAGTCCCTCCTAAACTGTGGAGCTTCTAGACATCTTTACATGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAAGTCCCTCCTAAACTGTGGAGCTTCTAGACATCTTTACATGACA  747

seq1  GGTAGCAATCAGGATATGTTATACTATGACAGGAAGTGCAACTAGCTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCAATCAGGATATGTTATACTATGACAGGAAGTGCAACTAGCTATG  797

seq1  ATGGGTAGACCATCATATTTATAAACCTATTGTATATTAGAATTTTAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTAGACCATCATATTTATAAACCTATTGTATATTAGAATTTTAATG  847

seq1  TCAATACTAGCATAATCTATTTTGCTTTAATATTTTTTTCTTAGTAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACTAGCATAATCTATTTTGCTTTAATATTTTTTTCTTAGTAGGAA  897

seq1  GCTTTAACTGTTTTAAATACTCAGAGTTTGGATTTAAGACAGAGTTACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAACTGTTTTAAATACTCAGAGTTTGGATTTAAGACAGAGTTACAT  947

seq1  CAAATATGGAATTC  964
      ||||||||||||||
seq2  CAAATATGGAATTC  961

seq1: chr10_104054131_104054428
seq2: B6Ng01-156K13.g_73_370 (reverse)

seq1  GATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAG  50
      |||||||||||||||||||||||| | |||||||||||||||||||||||
seq2  GATTTCCAGAGTGGTTGTACAAGCTTACAATCCCACCAACAATGGAGGAG  50

seq1  TGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTT  100
      |||||||||| | |||||||||||||||||  ||||||||||||||||||
seq2  TGTTCCTCTTCCCCCACATCCTCGCCAGCAATTGCTGTCACCTGAATTTT  100

seq1  TGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTG  150
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGATCTTAGCCATTCTGACTGGTGTGAGATGGAATCTCAGGGTTGTTTTG  150

seq1  ATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTT  200
      | ||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  AGTTGCAGTTCCCTGATGATTAAGGATGCTGAACATTTTTTCAGGTGCTT  200

seq1  CTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGC  250
      ||| |||||| |||||| ||||||||||| ||||||||| ||  ||||||
seq2  CTCAGCCATTTGGTATTTCTCAGGTGAGAGTTCTTTGTTTAGCACTGAGC  250

seq1  CCCATTTTTTAATAGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGA  298
      |||| ||||||||  ||||||||||||||||| |||||||||||||||
seq2  CCCACTTTTTAATGAGGTTATTTGATTTTCTGGAGTCCACCTTCTTGA  298