BAC Information

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BAC

Clone NameB6Ng01-157H16
Chromosome10 (Build37)
Map Location 129,525,001 - 129,651,001
singlet/doubletdoublet
Overlap geneOlfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827
Upstream geneOlfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822
Downstream geneNeurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157H16.bB6Ng01-157H16.g
ACCDH951703DH951704
length1,109733
definitionDH951703|Mus musculus domesticus DNA, BAC clone: B6Ng01-157H16, 5' end.DH951704|Mus musculus domesticus DNA, BAC clone: B6Ng01-157H16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,525,001 - 129,526,119)(129,650,269 - 129,651,001)
sequence
gaattcagtaacatggtattattgttactaaatcattcccatccataatc
aattcagttggcttgtgttttaagcacaagaattttgtgaaaattagaaa
tatgtagactactcaatatagatgttgcttaatactcagtaagtatgtcc
caggtgtcagaggaacaaaatctgtgcctacattcctatattactccaac
atcagagatgctttttggtgtgtgtgtgtgtgtgtgtcctgagaagattc
tttgctttgcttcttactggaaaaacacaccttcccagtcccaactgcaa
attagcactatgaaagacaaggaccggcatgaggacataaccttgaagag
acagtctgaaaggttgacactctggaagttttaattaaaactctggagta
ttgaccttccagtttagatgggaaggttccctgagacccagggaccacat
ctctgaggtgggacagtgttccattaaaagggcatcctgagacaggaaga
gtgtcctcagctaaactcaagcacaggaacctcagccctgctctttctct
ttgctttctcccttctcataattgcttcttggtttctttccatgagaaag
tcacactggcagcaaatcttgtaaaggagatttatcgggaatgtccaggg
tgtaaagggatgaatccagggaggcggggattgtctctgctctcagaagt
tgacaataggaaattgagcaaacacagcctttatatgatgttttggggga
ttgaggacagtggagctttcttgggcaaagatctccagagtggggattgg
tggaatttaagtcctgagcttttagtagcacagagattagtggatttacc
tgttcagggactggtgggtttacaaagtttacaaaaggagtccacagcag
ggattccttgccaacttgagtggcatggatagccaccacagagttttaga
aattatactgtttttcatgttcagtctcttagaagctgtctagtagggtt
tctactgctgcacaatacattatgatctaaaacaagttgtgaagcaaaaa
gtttattcaccttatcttccgatggcttcccaccaaaggaaggcagttac
tctaaaggg
gaattcttcagcttcttgtaagagaggttacaagagagtataaatacaag
ggactatacaagtataaggtaagaatgtttattaaatacttctatatttt
tatccagtaaaaagaaaacccaggacattatctagatacttaaaatataa
ttttcatgtagagtaaaatgtgttgatataatttagtgattattctggtt
agaataagctttgagaactgcattccattatctaaagaaagagaatggct
aaatctgactaaaaatacaatagttgatattaaaagtatagtttgagttg
cataaactctattatctcatttgctttaatttcactgcttaataaatttc
acagtattaaaacttctccatttcctgtatttcaattatttcatatataa
tattgatcatttataattattaatgcagataagtctttcaaagcccattt
ttcataattttgtgtgcaagatatgaacaacattgatttaatgactattt
gtttaggttagaatagtcagcttttatttctagatagattgaacattttt
ctgaatccaaagttatctacagtgtgacttaaatacatggtggaggattt
agtcaggtttgtccttaaagtcacttcaactaagctcgctgtgctcatac
aacctcttacctataaccttcagtactgccactctaagctattttaaaat
gtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129525001_129526119
seq2: B6Ng01-157H16.b_47_1155

seq1  GAATTCAGTAACATGGTATTATTGTTACTAAATCATTCCCATCCATAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAACATGGTATTATTGTTACTAAATCATTCCCATCCATAATC  50

seq1  AATTCAGTTGGCTTGTGTTTTAAGCACAAGAATTTTGTGAAAATTAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGTTGGCTTGTGTTTTAAGCACAAGAATTTTGTGAAAATTAGAAA  100

seq1  TATGTAGACTACTCAATATAGATGTTGCTTAATACTCAGTAAGTATGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGACTACTCAATATAGATGTTGCTTAATACTCAGTAAGTATGTCC  150

seq1  CAGGTGTCAGAGGAACAAAATCTGTGCCTACATTCCTATATTACTCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCAGAGGAACAAAATCTGTGCCTACATTCCTATATTACTCCAAC  200

seq1  ATCAGAGATGCTTTTTGGTGTGTGTGTGTGTGTGTGTCCTGAGAAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGATGCTTTTTGGTGTGTGTGTGTGTGTGTGTCCTGAGAAGATTC  250

seq1  TTTGCTTTGCTTCTTACTGGAAAAACACACCTTCCCAGTCCCAACTGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTGCTTCTTACTGGAAAAACACACCTTCCCAGTCCCAACTGCAA  300

seq1  ATTAGCACTATGAAAGACAAGGACCGGCATGAGGACATAACCTTGAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCACTATGAAAGACAAGGACCGGCATGAGGACATAACCTTGAAGAG  350

seq1  ACAGTCTGAAAGGTTGACACTCTGGAAGTTTTAATTAAAACTCTGGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTGAAAGGTTGACACTCTGGAAGTTTTAATTAAAACTCTGGAGTA  400

seq1  TTGACCTTCCAGTTTAGATGGGAAGGTTCCCTGAGACCCAGGGACCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTTCCAGTTTAGATGGGAAGGTTCCCTGAGACCCAGGGACCACAT  450

seq1  CTCTGAGGTGGGACAGTGTTCCATTAAAAGGGCATCCTGAGACAGGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGTGGGACAGTGTTCCATTAAAAGGGCATCCTGAGACAGGAAGA  500

seq1  GTGTCCTCAGCTAAACTCAAGCACAGGAACCTCAGCCCTGCTCTTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTCAGCTAAACTCAAGCACAGGAACCTCAGCCCTGCTCTTTCTCT  550

seq1  TTGCTTTCTCCCTTCTCATAATTGCTTCTTGGTTTCTTTCCATGAGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCTCCCTTCTCATAATTGCTTCTTGGTTTCTTTCCATGAGAAAG  600

seq1  TCACACTGGCAGCAAATCTTGTAAAGGAGATTTATCGGGAATGTCCAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTGGCAGCAAATCTTGTAAAGGAGATTTATCGGGAATGTCCAGGG  650

seq1  TGTAAAGGGATGAATCCAGGGAGGCGGGGATTGTCTCTGCTCTCAGAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGGGATGAATCCAGGGAGGCGGGGATTGTCTCTGCTCTCAGAAGT  700

seq1  TGACAATAGGAAATTGAGCAAACACAGCCTTTATATGATGTTTTGGGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATAGGAAATTGAGCAAACACAGCCTTTATATGATGTTTTGGGGGA  750

seq1  TTGAGGACAGTGGAGCTTTCTTGGGCAAAGATCTCCAGAGTGGGGATTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGACAGTGGAGCTTTCTTGGGCAAAGATCTCCAGAGTGGGGATTGG  800

seq1  TGGAATTTCAAGTCCTGAGCTTTTAGTAGCACAGAGATTAGTGGATTTAC  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTT-AAGTCCTGAGCTTTTAGTAGCACAGAGATTAGTGGATTTAC  849

seq1  CTGTTCAGGGACTGGTGGGTTTACAAAGTTTACAAAAGGAGTCCACAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGGACTGGTGGGTTTACAAAGTTTACAAAAGGAGTCCACAGCA  899

seq1  GGGATTCC-TGCCAACTTGAGTGGCATGAATAGCCACCACAGAGTTTTTA  949
      |||||||| ||||||||||||||||||| ||||||||||||||| |||||
seq2  GGGATTCCTTGCCAACTTGAGTGGCATGGATAGCCACCACAGAG-TTTTA  948

seq1  GAAATTATACTGTTTTTTCATGTTCAGTCTCTTAGAGGCTGTCTTAGTTA  999
      |||||||||||| ||||||||||||||||||||||| |||||| ||| ||
seq2  GAAATTATACTG-TTTTTCATGTTCAGTCTCTTAGAAGCTGTC-TAG-TA  995

seq1  GGGTTTCTACTGCTGCAACAATACACTATGATCAAAAACAAGTTGTGAAG  1049
      |||||||||||||||| |||||||| ||||||| ||||||||||||||||
seq2  GGGTTTCTACTGCTGC-ACAATACATTATGATCTAAAACAAGTTGTGAAG  1044

seq1  CAAAGAGTTTATTCACCTTATACTTCCAGATTGCTTTTCACACCAAAGGA  1099
      |||| |||||||||||||||| ||||| ||| ||  ||| ||||||||||
seq2  CAAAAAGTTTATTCACCTTAT-CTTCC-GATGGC--TTCCCACCAAAGGA  1090

seq1  AGTCAGTTACTCAAAAAGGG  1119
      || ||||||||| ||| || 
seq2  AGGCAGTTACTCTAAAGGG-  1109

seq1: chr10_129650269_129651001
seq2: B6Ng01-157H16.g_66_798 (reverse)

seq1  CACACACACACATACACACACACACACACACACATTTTAAAATAGCTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACATACACACACACACACACACACATTTTAAAATAGCTTAG  50

seq1  AGTGGCAGTACTGAAGGTTATAGGTAAGAGGTTGTATGAGCACAGCGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAGTACTGAAGGTTATAGGTAAGAGGTTGTATGAGCACAGCGAGC  100

seq1  TTAGTTGAAGTGACTTTAAGGACAAACCTGACTAAATCCTCCACCATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTGAAGTGACTTTAAGGACAAACCTGACTAAATCCTCCACCATGTA  150

seq1  TTTAAGTCACACTGTAGATAACTTTGGATTCAGAAAAATGTTCAATCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTCACACTGTAGATAACTTTGGATTCAGAAAAATGTTCAATCTAT  200

seq1  CTAGAAATAAAAGCTGACTATTCTAACCTAAACAAATAGTCATTAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATAAAAGCTGACTATTCTAACCTAAACAAATAGTCATTAAATCA  250

seq1  ATGTTGTTCATATCTTGCACACAAAATTATGAAAAATGGGCTTTGAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTTCATATCTTGCACACAAAATTATGAAAAATGGGCTTTGAAAGA  300

seq1  CTTATCTGCATTAATAATTATAAATGATCAATATTATATATGAAATAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGCATTAATAATTATAAATGATCAATATTATATATGAAATAATT  350

seq1  GAAATACAGGAAATGGAGAAGTTTTAATACTGTGAAATTTATTAAGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACAGGAAATGGAGAAGTTTTAATACTGTGAAATTTATTAAGCAGT  400

seq1  GAAATTAAAGCAAATGAGATAATAGAGTTTATGCAACTCAAACTATACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAAAGCAAATGAGATAATAGAGTTTATGCAACTCAAACTATACTT  450

seq1  TTAATATCAACTATTGTATTTTTAGTCAGATTTAGCCATTCTCTTTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCAACTATTGTATTTTTAGTCAGATTTAGCCATTCTCTTTCTTT  500

seq1  AGATAATGGAATGCAGTTCTCAAAGCTTATTCTAACCAGAATAATCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGGAATGCAGTTCTCAAAGCTTATTCTAACCAGAATAATCACTA  550

seq1  AATTATATCAACACATTTTACTCTACATGAAAATTATATTTTAAGTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATCAACACATTTTACTCTACATGAAAATTATATTTTAAGTATCT  600

seq1  AGATAATGTCCTGGGTTTTCTTTTTACTGGATAAAAATATAGAAGTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATGTCCTGGGTTTTCTTTTTACTGGATAAAAATATAGAAGTATTT  650

seq1  AATAAACATTCTTACCTTATACTTGTATAGTCCCTTGTATTTATACTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACATTCTTACCTTATACTTGTATAGTCCCTTGTATTTATACTCTC  700

seq1  TTGTAACCTCTCTTACAAGAAGCTGAAGAATTC  733
      |||||||||||||||||||||||||||||||||
seq2  TTGTAACCTCTCTTACAAGAAGCTGAAGAATTC  733