BAC Information

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BAC

Clone NameB6Ng01-157L17
Chromosome10 (Build37)10 (Build37)
Map Location 104,053,414 - 104,054,22831,168,298 - 31,169,218
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157L17.bB6Ng01-157L17.g
ACCDH951885DH951886
length1,009922
definitionDH951885|Mus musculus domesticus DNA, BAC clone: B6Ng01-157L17, 5' end.DH951886|Mus musculus domesticus DNA, BAC clone: B6Ng01-157L17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,414 - 104,054,228)(31,168,298 - 31,169,218)
sequence
gaattcaggtgacagcagatgctggcaaggacgtggaaaaagaggaacac
tcctccattgttggtgggattgcaagcttgtacaaccactctggaaatca
gtctggtggttcctcagaaaattggacatagtaataccagaggatccctc
aatacctctcctgggcatatatccagaagatgtcccaaccggtaagaaga
acacatgctccactatgttcatagcagccttatttataatagccagaagc
tggaaagaacccagatgcccctcaacagaggaatggatacagaaaatgtg
gtacatctacacaatggagtactactcagctattaaaaataatgaattta
tgaaattcctaggcaaatggatggacctggagatcatcatcctgagtgag
gtaacccaatcacaaaggaactcacacaatatgtactcactgataagtgg
atattaacccagaaacttaggatacccaagatataagataccatttgcta
aatgcatgaaactcaagaagaacgaagaccaaagtgtggacactttgccc
cttcttagaattgggaacaaaacacccatggaatgagttacagagacaaa
gtttggagctgagacaaaaggatgggccatctagagactgcaatatccgg
gaatccatcccataatcagcttccaaactctgacaccattgcacacacta
gcaagattttgctgaaaggacccagacagacctctcccttgtgagagtat
gccgggggcctagcaaacacagaagtggatgctcacagtcagctattgga
tggatcacagggcccccaatggaggagctagagaaagtgcaagatgtctg
ttatagggcaatgtctgacggagaccctgtagtttttcttcatttgagaa
catgactggcggctgcatttcttccagagtctttttcaagatttcacact
agatgaagttggaatttctatacagaacattaagcctagtttatacctca
atttgtttt
gaattcttcttgaaagtttaagcaaacaagtctttttagtggccatacct
ggaacacaacacacagacatgagattgagtcaatgaattcttgccctctc
tgtgagactccttctgaagaggtgatggtatagtggatagcatctatagc
caagggaaggtgagctggcctgaagcagctctaggccttccataatgcac
agtgctgaaggtgctcatgagatgtgggcagggaataaaaataagatgaa
agactggaaaggactagcaaacaaaacaaaaactgttgctcttcttcatg
atcctagctaggtgcagaactcaagctttggtgtacccactctgaaaact
gccagctgtacagctaaggtaagtttcttagtctggtagtgcctagcttt
ctccattttgtggtattcactgatgtgtttgttctcatcctcctggcccg
ttggtattggctcccagtgtgctgaacataaggaccaaatgaggggcttt
gtgtcatttctgcccctgtgctcatattccagataatctaatttaattta
tattttgaaagctctctaggtaatactgatattctcctaagactgagaat
ggctgttaggtattatccacagcaaagatgaaaggcactgattctccagc
ttaaattaaaaagtagtcattcaggtagatagatgtagggagagaggaat
gaaagaagagcaagtatttatacccctaaatgtagaagaattggagaggg
catagaaactggaggaggcagagattcagaagccgacatgagtctgtttg
tgtgtcccaccatctgtcctagagaaggcctggacctgacagttctattg
caggctttcactccaccttcagtcatggaacagagagtgtgtgcatgtgt
gtgtgtgtgtgtgtgtgtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053414_104054228
seq2: B6Ng01-157L17.b_49_652 (reverse)

seq1  CAAATTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTTCCTATTCTA  50
      |||| |||||||||||||||| |||||||||||||||||| || ||||||
seq2  CAAACTTTGTCTCTGTAACTCATTCCATGGGTGTTTTGTTCCCAATTCTA  50

seq1  AGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTC-TCTTGAGTTTAAT  99
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  AGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTGAGTTTCAT  100

seq1  GTGTTTAGCAAATTGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGCT  149
      |  |||||||||| |||||||||||||||||||||||||||||||||| |
seq2  GCATTTAGCAAATGGTATCTTATATCTTGGGTATCCTAAGTTTCTGGGTT  150

seq1  AATATCCACTTATCAGTGAGTACATATTGCGCGAGTTCCTTTGTGATTGG  199
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  AATATCCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGATTGG  200

seq1  GTTACCGCACTCAGGATGATACTCTCCAGGTCCATCCATTTGCCTAGGAA  249
      |||||| |||||||||||||  ||||||||||||||||||||||||||||
seq2  GTTACCTCACTCAGGATGATGATCTCCAGGTCCATCCATTTGCCTAGGAA  250

seq1  TTTCATAAATTCATTCTTTTTAATAGCTCCATTTACATTTAATTTAATTA  299
      ||||||||||||||| |||||||||||                       
seq2  TTTCATAAATTCATTATTTTTAATAGC-----------------------  277

seq1  ATGTAATTACAATTAATTAATTTATTAATTAAATAATTTAATAATTTAAT  349
                                                        
seq2  --------------------------------------------------  277

seq1  TGATAAATTAATTTAATTAATTAATTTAATTAATTAAATTAAATAATAAT  399
                                                        
seq2  --------------------------------------------------  277

seq1  TTAATAATAAATTAAATATTTTAAAATTAATAATAATTTTATAAGTAAAT  449
                                               | ||||   
seq2  -----------------------------------------TGAGTA---  283

seq1  AATTTAATTAATGTAATTTAATTAATGTAATTACATTACATTTAATAGCT  499
                                |||                   ||
seq2  --------------------------GTA-------------------CT  288

seq1  CCATTGTGTAAATGTACCACATTTTCTGTATCTATTCCTCTGTTGAGGGG  549
      |||||||||| ||||||||||||||||||||| |||||||||||||||||
seq2  CCATTGTGTAGATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGG  338

seq1  CATCTGGGTTCTTTCCAGCTCCTGGCTATTATAAATAAGGCTGCTATGAA  599
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAA  388

seq1  TATAGTGGAGCATGTGTCCTTCTTACCGGTTGGGGCATCTTCTGGATATA  649
       |||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  CATAGTGGAGCATGTGTTCTTCTTACCGGTTGGGACATCTTCTGGATATA  438

seq1  TGCCCAGAAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTT  699
      ||||||| ||||||||||  |||||||| |||| ||||||||||||||||
seq2  TGCCCAGGAGAGGTATTGAGGGATCCTCTGGTATTACTATGTCCAATTTT  488

seq1  CTGACGAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATC  749
      |||| ||||| |||||| |||||||||||||||||||||||| |||||||
seq2  CTGAGGAACCACCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATC  538

seq1  CCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATC  799
      ||||||||||||||||||||||||||||| ||||| |||| |||||||||
seq2  CCACCAACAATGGAGGAGTGTTCCTCTTTTTCCACGTCCTTGCCAGCATC  588

seq1  TGCTGTCACCTGAATT  815
      ||||||||||||||||
seq2  TGCTGTCACCTGAATT  604

seq1: chr10_31168298_31169218
seq2: B6Ng01-157L17.g_67_987

seq1  GAATTCTTCTTGAAAGTTTAAGCAAACAAGTCTTTTTAGTGGCCATACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGAAAGTTTAAGCAAACAAGTCTTTTTAGTGGCCATACCT  50

seq1  GGAACACAACACACAGACATGAGATTGAGTCAATGAATTCTTGCCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACAACACACAGACATGAGATTGAGTCAATGAATTCTTGCCCTCTC  100

seq1  TGTGAGACTCCTTCTGAAGAGGTGATGGTATAGTGGATAGCATCTATAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGACTCCTTCTGAAGAGGTGATGGTATAGTGGATAGCATCTATAGC  150

seq1  CAAGGGAAGGTGAGCTGGCCTGAAGCAGCTCTAGGCCTTCCATAATGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAGGTGAGCTGGCCTGAAGCAGCTCTAGGCCTTCCATAATGCAC  200

seq1  AGTGCTGAAGGTGCTCATGAGATGTGGGCAGGGAATAAAAATAAGATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGAAGGTGCTCATGAGATGTGGGCAGGGAATAAAAATAAGATGAA  250

seq1  AGACTGGAAAGGACTAGCAAACAAAACAAAAACTGTTGCTCTTCTTCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGAAAGGACTAGCAAACAAAACAAAAACTGTTGCTCTTCTTCATG  300

seq1  ATCCTAGCTAGGTGCAGAACTCAAGCTTTGGTGTACCCACTCTGAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGCTAGGTGCAGAACTCAAGCTTTGGTGTACCCACTCTGAAAACT  350

seq1  GCCAGCTGTACAGCTAAGGTAAGTTTCTTAGTCTGGTAGTGCCTAGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTGTACAGCTAAGGTAAGTTTCTTAGTCTGGTAGTGCCTAGCTTT  400

seq1  CTCCATTTTGTGGTATTCACTGATGTGTTTGTTCTCATCCTCCTGGCCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTTGTGGTATTCACTGATGTGTTTGTTCTCATCCTCCTGGCCCG  450

seq1  TTGGTATTGGCTCCCAGTGTGCTGAACATAAGGACCAAATGAGGGGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTGGCTCCCAGTGTGCTGAACATAAGGACCAAATGAGGGGCTTT  500

seq1  GTGTCATTTCTGCCCCTGTGCTCATATTCCAGATAATCTAATTTAATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATTTCTGCCCCTGTGCTCATATTCCAGATAATCTAATTTAATTTA  550

seq1  TATTTTGAAAGCTCTCTAGGTAATACTGATATTCTCCTAAGACTGAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAAAGCTCTCTAGGTAATACTGATATTCTCCTAAGACTGAGAAT  600

seq1  GGCTGTTAGGTATTATCCACAGCAAAGATGAAAGGCACTGATTCTCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTAGGTATTATCCACAGCAAAGATGAAAGGCACTGATTCTCCAGC  650

seq1  TTAAATTAAAAAGTAGTCATTCAGGTAGATAGATGTAGGGAGAGAGGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAAAAAGTAGTCATTCAGGTAGATAGATGTAGGGAGAGAGGAAT  700

seq1  GAAAGAAGAGCAAGTATTTATACCCCTAAATGTAGAAGAATTGGAGAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGAGCAAGTATTTATACCCCTAAATGTAGAAGAATTGGAGAGGG  750

seq1  CATAGAAACTGGAGGAGGCAGAGATTCAAGAAGCCGACATGAGTCTGTTT  800
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CATAGAAACTGGAGGAGGCAGAGATTC-AGAAGCCGACATGAGTCTGTTT  799

seq1  GTGTGTCCCACCATCTGTCCTAGAGAAGGCCTGGACCTGACAGTTCTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTCCCACCATCTGTCCTAGAGAAGGCCTGGACCTGACAGTTCTATT  849

seq1  GCAGGCTTTCACTCCACCTTCAGTCATGG-ACAGAGAGTGTGTGCATGTG  899
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCAGGCTTTCACTCCACCTTCAGTCATGGAACAGAGAGTGTGTGCATGTG  899

seq1  TGTGTGTGTGTGTGTGTGTGTG  921
      ||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTG  921