BAC Information

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BAC

Clone NameB6Ng01-158A08
Chromosome10 (Build37)
Map Location 123,472,359 - 123,551,771
singlet/doubletdoublet
Overlap genenone
Upstream geneMon2, Usp15, LOC100042958, AI851790
Downstream gene4930503E24Rik, LOC671416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158A08.bB6Ng01-158A08.g
ACCDH952093DH952094
length1,2101,027
definitionDH952093|Mus musculus domesticus DNA, BAC clone: B6Ng01-158A08, 5' end.DH952094|Mus musculus domesticus DNA, BAC clone: B6Ng01-158A08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,550,510 - 123,551,771)(123,472,359 - 123,473,409)
sequence
gaattcaaccattgatccatatctggctggatatgagtatatggcaataa
atatgttggtagagtattggttgaaaagcccatgctactaaggctggtga
cctcagctcattccacagaatccacatgatgtaaagaaagaactgaccca
tacaactcatcctctgactgaaacacgtgcattcacatacatggaaagaa
tatgttagaaggtagaaatcatgatgttaaaatctaacatactaaaaacc
taaaaggcatgcttgacaataccacgaaggtgtaaaatgcctgtggtagg
agggaagataaatgatggtaaacatcaatttaacctgatttcagttcaac
tcttaccttgttgctgtactgcaggaaagttcttccaggttagttgtcga
gttggtagacagttcacatagccaatgaaagactctggcaatctggcaac
atcaatgaccctgattggcctcttcatctgttttaactatagttggaaac
tcaaagtagcatctgtactatccagcttagctggaaggtgagcaactcaa
aataataaataaataaataaataaataaataaataaataaataacactag
tctcctctctaaatgcagtgcgttcattttattagggatattgtcctagc
catgttagttttttatttcattgattttttttttcatgtaaattgtaaaa
tcacagaaacctactcctgggtaggatagagtagtccatgcgcagtgtag
tagtgataattattaactaattaattattattaaaagatatacattgaaa
aatattagtaccttgaaatggaagtagaagtgaaaccaacagccatcaat
gcaagcacattcttcccctttgcctcctgtctgactgggcgatacggggc
gtttgctacaagccaggtgagatatggtccatcctagtcagatgtgtgtt
cgacagtaggcaaacaggagaaaaaaaaggcatttcagctgagtgactct
caaaggatgtactagcaaatatgtcatttaatacatagattataaaagag
agtcacttgaaaactcaatctacatacatcaaccagtacgtatgagtgtt
tacaatgagaagtcattattctcaatcggcttttttttctctataatgca
gatctgagactgacaaaagacttctagcattcattaggttgacctgtgtt
tatctgtgga
gaattcactatgtagagcagggtggtctcaaattcacagcaggcttcctg
ctactttgttccaagtgctgggactaaagtcctgcattaccatgttagtt
ttattgaaacagtctttaagaataaaactacatggccagtgtactaatgt
tttataagtcaaataatataaccaatataatattaaaatttaactctgat
cagattatgatgacttagatatttttttaattttactccatgaaataagt
catgcaaaaatttaaaatagtagaggtgatgagaaagaatgtacaaagtt
atctactactgacttatatattttgttctgttcttagatctttttctctt
gattgttaggattataatagtagaatgctctttagatgagtaattactga
gaatcacatttactttttttttttttttcaaggcagggtttctctatgta
tccctggctgtcttggaactcactttgtagaccaggctggcctcaaactc
agaaatctgcctgcctctgcctcccgagtgctgggattaaaggcgtgtgc
caccacgcctggccgatttctttttaaaaaaaattggattactatttata
aaatatcaacacatttaggaaggaacttcagggaagaatttttactcaaa
atcttgtagctgaatatgttttttattttacattgaatatagataaacca
tatctttggtaataagtaacaatacagttctaacattttcacatcatgaa
tcaaagaacattgtcatgttgcaccatacaggtatgtttagctgcttaaa
acaatgccagttgttttggaagtatgccccattgtacactattctctcaa
tatcaatgatctcaattcccatacagacacaagctaacagaatggatatg
aaaacaggatcattatttttctgtatacaagaaacacacctcacatcaag
atacatgctatgtaaggtttgaaatgatttcagccaaagaccagtagcag
ctgtatagcattctcatatctaccaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123550510_123551771
seq2: B6Ng01-158A08.b_50_1259 (reverse)

seq1  TCCACAGATAACACATAGTCTTAATCATAATTTGAGAAATAGCTAGGAGA  50
      ||||||||||| ||| ||   | | | ||||    |||   ||||| || 
seq2  TCCACAGATAA-ACACAG--GTCAACCTAAT----GAA--TGCTAGAAG-  40

seq1  AGCTCATTAAGTCTGAGTCTTCCAAGATCCTGCATTTATTAGAAGAAAAA  100
         || ||   | | |||||    |||| ||||| ||||    ||| |||
seq2  ---TCTTT---TGTCAGTCT---CAGAT-CTGCA-TTAT----AGAGAAA  75

seq1  AAAAGGCCGATTTGAGGTATAATGACTTTCTCATTTGTAAACACTCATTA  150
      |||| ||||| |||| | |||||||| |||||| ||||||||||||| ||
seq2  AAAAAGCCGA-TTGA-GAATAATGAC-TTCTCA-TTGTAAACACTCA-TA  120

seq1  CGTAACTTGTGTTTGGATGTATGTTAGATTTGAGTTTTTCAAGTGACTCT  200
      ||| ||| |    | |||||||| |||| ||||| |||||||||||||||
seq2  CGT-ACTGG----TTGATGTATG-TAGA-TTGAG-TTTTCAAGTGACTCT  162

seq1  CTTTTATAATTCCTTATGTATTAAATTGACATATTTGCCTAGTTACATCC  250
      ||||||||||    ||||||||||| ||||||||||| |||| ||||| |
seq2  CTTTTATAAT---CTATGTATTAAA-TGACATATTTG-CTAG-TACAT-C  205

seq1  CTTTGAGGAGTCACCTCAGCTGAAATGCCCTTTTTTTTTCTCCTGTTTTG  300
      |||||| |||||| |||||||||||||||  |||||||||||||| ||||
seq2  CTTTGA-GAGTCA-CTCAGCTGAAATGCC--TTTTTTTTCTCCTG-TTTG  250

seq1  CCTACTGTCGAACACACATCTGACCTAGGATGGACCATATTCTCACCTGG  350
      ||||||||||||||||||||||| ||||||||||||||| ||||||||||
seq2  CCTACTGTCGAACACACATCTGA-CTAGGATGGACCATA-TCTCACCTGG  298

seq1  CTTGTAGCAAACGCCCCGTATCGCCCAGTCAGACAGGAGGCAAAGGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGCAAACGCCCCGTATCGCCCAGTCAGACAGGAGGCAAAGGGGAA  348

seq1  GAATGTGCTTGCATTGATGGCTGTTGGTTTCACTTCTACTTCCATTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGCTTGCATTGATGGCTGTTGGTTTCACTTCTACTTCCATTTCAA  398

seq1  GGTACTAATATTTTTCAATGTATATCTTTTAATAATAATTAATTAGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTAATATTTTTCAATGTATATCTTTTAATAATAATTAATTAGTTAA  448

seq1  TAATTATCACTACTACACTGCGCATGGACTACTCTATCCTACCCAGGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATCACTACTACACTGCGCATGGACTACTCTATCCTACCCAGGAGT  498

seq1  AGGTTTCTGTGATTTTACAATTTACATGAAAAAAAAAATCAATGAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTGTGATTTTACAATTTACATGAAAAAAAAAATCAATGAAATAA  548

seq1  AAAACTAACATGGCTAGGACAATATCCCTAATAAAATGAACGCACTGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAACATGGCTAGGACAATATCCCTAATAAAATGAACGCACTGCAT  598

seq1  TTAGAGAGGAGACTAGTGTTATTTATTTATTTATTTATTTATTTATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAGGAGACTAGTGTTATTTATTTATTTATTTATTTATTTATTTAT  648

seq1  TTATTTATTATTTTGAGTTGCTCACCTTCCAGCTAAGCTGGATAGTACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTATTTTGAGTTGCTCACCTTCCAGCTAAGCTGGATAGTACAG  698

seq1  ATGCTACTTTGAGTTTCCAACTATAGTTAAAACAGATGAAGAGGCCAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACTTTGAGTTTCCAACTATAGTTAAAACAGATGAAGAGGCCAATC  748

seq1  AGGGTCATTGATGTTGCCAGATTGCCAGAGTCTTTCATTGGCTATGTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCATTGATGTTGCCAGATTGCCAGAGTCTTTCATTGGCTATGTGAA  798

seq1  CTGTCTACCAACTCGACAACTAACCTGGAAGAACTTTCCTGCAGTACAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTACCAACTCGACAACTAACCTGGAAGAACTTTCCTGCAGTACAGC  848

seq1  AACAAGGTAAGAGTTGAACTGAAATCAGGTTAAATTGATGTTTACCATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGTAAGAGTTGAACTGAAATCAGGTTAAATTGATGTTTACCATCA  898

seq1  TTTATCTTCCCTCCTACCACAGGCATTTTACACCTTCGTGGTATTGTCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTCCCTCCTACCACAGGCATTTTACACCTTCGTGGTATTGTCAA  948

seq1  GCATGCCTTTTAGGTTTTTAGTATGTTAGATTTTAACATCATGATTTCTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCCTTTTAGGTTTTTAGTATGTTAGATTTTAACATCATGATTTCTA  998

seq1  CCTTCTAACATATTCTTTCCATGTATGTGAATGCACGTGTTTCAGTCAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAACATATTCTTTCCATGTATGTGAATGCACGTGTTTCAGTCAGA  1048

seq1  GGATGAGTTGTATGGGTCAGTTCTTTCTTTACATCATGTGGATTCTGTGG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGTTGTATGGGTCAGTTCTTTCTTTACATCATGTGGATTCTGTGG  1098

seq1  AATGAGCTGAGGTCACCAGCCTTAGTAGCATGGGCTTTTCAACCAATACT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCTGAGGTCACCAGCCTTAGTAGCATGGGCTTTTCAACCAATACT  1148

seq1  CTACCAACATATTTATTGCCATATACTCATATCCAGCCAGATATGGATCA  1250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAACATATTTATTGCCATATACTCATATCCAGCCAGATATGGATCA  1198

seq1  ATGGTTGAATTC  1262
      ||||||||||||
seq2  ATGGTTGAATTC  1210

seq1: chr10_123472359_123473409
seq2: B6Ng01-158A08.g_66_1092

seq1  GAATTCACTATGTAGAGCAGGGTGGTCTCAAATTCACAGCAGGCTTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGAGCAGGGTGGTCTCAAATTCACAGCAGGCTTCCTG  50

seq1  CTACTTTGTTCCAAGTGCTGGGACTAAAGTCCTGCATTACCATGTTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGTTCCAAGTGCTGGGACTAAAGTCCTGCATTACCATGTTAGTT  100

seq1  TTATTGAAACAGTCTTTAAGAATAAAACTACATGGCCAGTGTACTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAAACAGTCTTTAAGAATAAAACTACATGGCCAGTGTACTAATGT  150

seq1  TTTATAAGTCAAATAATATAACCAATATAATATTAAAATTTAACTCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGTCAAATAATATAACCAATATAATATTAAAATTTAACTCTGAT  200

seq1  CAGATTATGATGACTTAGATATTTTTTTAATTTTACTCCATGAAATAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTATGATGACTTAGATATTTTTTTAATTTTACTCCATGAAATAAGT  250

seq1  CATGCAAAAATTTAAAATAGTAGAGGTGATGAGAAAGAATGTACAAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAAAATTTAAAATAGTAGAGGTGATGAGAAAGAATGTACAAAGTT  300

seq1  ATCTACTACTGACTTATATATTTTGTTCTGTTCTTAGATCTTTTTCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTACTGACTTATATATTTTGTTCTGTTCTTAGATCTTTTTCTCTT  350

seq1  GATTGTTAGGATTATAATAGTAGAATGCTCTTTAGATGAGTAATTACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTAGGATTATAATAGTAGAATGCTCTTTAGATGAGTAATTACTGA  400

seq1  GAATCACATTTACTTTTTTTTTTTTTTTCAAGGCAGGGTTTCTCTATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACATTTACTTTTTTTTTTTTTTTCAAGGCAGGGTTTCTCTATGTA  450

seq1  TCCCTGGCTGTCTTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGCTGTCTTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTC  500

seq1  AGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGTGC  550

seq1  CACCACGCCTGGCCGATTTCTTTTTAAAAAAAATTGGATTACTATTTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACGCCTGGCCGATTTCTTTTTAAAAAAAATTGGATTACTATTTATA  600

seq1  AAATATCAACACATTTAGGAAGGAACTTCAGGGAAGAATTTTTACTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAACACATTTAGGAAGGAACTTCAGGGAAGAATTTTTACTCAAA  650

seq1  ATCTTGTAGCTGAATATGTTTTTTATTTTACATTGAATATAGATAAACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTAGCTGAATATGTTTTTTATTTTACATTGAATATAGATAAACCA  700

seq1  TATCTTTGGTAATAAGTAACAATACAGTTCTAACATTTTCACATCATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTGGTAATAAGTAACAATACAGTTCTAACATTTTCACATCATGAA  750

seq1  TCAAAGAACATTGTCATGTTGCACCATACAGGTATGTTTAGCTGCTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAACATTGTCATGTTGCACCATACAGGTATGTTTAGCTGCTTAAA  800

seq1  ACAATGCCAGTTGTTTTGGAAGTATGCCCCATTGTACACTATTCTCTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCCAGTTGTTTTGGAAGTATGCCCCATTGTACACTATTCTCTCAA  850

seq1  TATCAATGATCTCAATTCCCCAATAACAGACACAAGCTAACAGAATGGAT  900
      ||||||||||||||||||||  || |||||||||||||||||||||||||
seq2  TATCAATGATCTCAATTCCC--AT-ACAGACACAAGCTAACAGAATGGAT  897

seq1  ATGAAAACAGGATCCATTATTTTTCTGTATACAAGAAACACACCTCAACA  950
      ||||||||||||| |||||||||||||||||||||||||||||||| |||
seq2  ATGAAAACAGGAT-CATTATTTTTCTGTATACAAGAAACACACCTC-ACA  945

seq1  TCAAAGATAACAATTGCCTTAATGTAAAGGGTTTGAAAATGATTTTCCAA  1000
      || ||||| |||  |||    ||||||  |||||| |||||||||  || 
seq2  TC-AAGAT-ACA--TGC---TATGTAA--GGTTTG-AAATGATTT--CAG  983

seq1  GCAAAAAGACCCAGTAGGCAAGCTGGTATAGCCATTCTCATATCTAACAA  1050
       |||| |   |||||||   |||| |||||| |||||||||||||| |||
seq2  CCAAAGA---CCAGTAG--CAGCT-GTATAG-CATTCTCATATCTACCAA  1026

seq1  A  1051
      |
seq2  A  1027