BAC Information

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BAC

Clone NameB6Ng01-159C21
Chromosome10 (Build37)
Map Location 37,580,563 - 37,581,653
singlet/doubletsinglet
Overlap genenone
Upstream geneHdac2, Marcks, LOC100040846
Downstream geneLOC100040915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159C21.bB6Ng01-159C21.g
ACCDH952925DH952926
length1,075714
definitionDH952925|Mus musculus domesticus DNA, BAC clone: B6Ng01-159C21, 5' end.DH952926|Mus musculus domesticus DNA, BAC clone: B6Ng01-159C21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgaggatcttttatgttgaataaaatgtatcatttctctcca
aaaatttaaatacatagaaatagaagtccaacatcacaaagcaaacctag
cccttggtagtgagaacccctaacatggaggtcaaagaatccatctcaat
ccttacatccttgcttcctttctgttcatgaatttagcaattggctctaa
gtggtctcctgtctgtagcattatatacctcccagtgtgacattaaagtt
gaagctgtttttcatagccaaataactgcttgtgtgggtgtgccaggctt
ctcctacatgatttattctctggtgatttatgctagctgtggaggaaggg
tcctgtgcctgcaagctgtgcatgtggatcatgaccacatactcttccca
ggtgaaaacagacagaggaaaagcaaactcttcctgcaggagcagcccca
ctctgaaggcccctccacagctgcgagacgggccacctgggccacggccc
ctttcaatagctggatatcctgttcagttttgctcctgcagagctgtcca
ggacaatcgcctgggaagtgaattgttactttccaggggttttaagcttg
ccaagattagttaggaaaacacagtttggggttatacaaattccaaatat
tctggctcccttgttgcctgaaattcgagagaaagaaaaagtatttgtgg
tgtttgtgagtttacatgtgttttgaagcaagagttcctgtatgaaaata
tataaattatcagatgtttctgtatgcaagccaccacatcctttaaaatg
gaacaattaaaatacaggcactccctgtgtgcctctaggaataacaagcc
aatactgttcttagatatgacaaagaaacgctgactgtgaaggtccaaag
cattgtttaaacttcactggatatacaatggcttcaaattttagaaatgt
attcatttaaattgtcttatgatctagaagaaagactaataataaaaggg
agagagagagacgagacgagagacgagagagacgagagtgctctgtgact
aagaccattactatcagtcagagga

gaattcacgaaattcctagccaaatggatggacctggagggcatcatcct
gagtgaggtaacacattcacaaaggaactcacacaatatgtactcactga
taagtggatattagcccaaaacctaggatacccaagatataagatacaat
ttcctaaacacatgaaactcaagaaaaatgaagactgaagtgtggacact
atgtccctccttagaagtgggaacaaaacacccttggaaggagttataga
gacaaagtttggagctgagatgaaaggatggaccatgttgagactgcctt
atccagggatccaccccataatcagcatccaaacgctgacaccattgcat
acactagcaagattttatcgaaaggacccagaggtagctgtctcttgtga
gactatgccggggcctagcaaacacagaagtggatgcccacagtcagcta
atggatggatcacagggctcccaatggaggagctagagaaagtacccaag
gagctaaagggatctgcaaccctataggtggatcaacattatgaactaac
cagtaccccggagctcttgactctagctgcatatgtatcaaaagatggcc
tagtcggccatcactggaaagaaaggcccattggacacacaaactttata
tgccccagaacaggggaacgccagggccaaaaagggggagtgggcgggta
ggggagtgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_37580563_37581653
seq2: B6Ng01-159C21.b_47_1121

seq1  GAATTCCTTGAGGATCTTTTATGTTGAATAAAATGTATCATTTCTCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAGGATCTTTTATGTTGAATAAAATGTATCATTTCTCTCCA  50

seq1  AAAATTTAAATACATAGAAATAGAAGTCCAACATCACAAAGCAAACCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTAAATACATAGAAATAGAAGTCCAACATCACAAAGCAAACCTAG  100

seq1  CCCTTGGTAGTGAGAACCCCTAACATGGAGGTCAAAGAATCCATCTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTAGTGAGAACCCCTAACATGGAGGTCAAAGAATCCATCTCAAT  150

seq1  CCTTACATCCTTGCTTCCTTTCTGTTCATGAATTTAGCAATTGGCTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACATCCTTGCTTCCTTTCTGTTCATGAATTTAGCAATTGGCTCTAA  200

seq1  GTGGTCTCCTGTCTGTAGCATTATATACCTCCCAGTGTGACATTAAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCCTGTCTGTAGCATTATATACCTCCCAGTGTGACATTAAAGTT  250

seq1  GAAGCTGTTTTTCATAGCCAAATAACTGCTTGTGTGGGTGTGCCAGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGTTTTTCATAGCCAAATAACTGCTTGTGTGGGTGTGCCAGGCTT  300

seq1  CTCCTACATGATTTATTCTCTGGTGATTTATGCTAGCTGTGGAGGAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACATGATTTATTCTCTGGTGATTTATGCTAGCTGTGGAGGAAGGG  350

seq1  TCCTGTGCCTGCAAGCTGTGCATGTGGATCATGACCACATACTCTTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCCTGCAAGCTGTGCATGTGGATCATGACCACATACTCTTCCCA  400

seq1  GGTGAAAACAGACAGAGGAAAAGCAAACTCTTCCTGCAGGAGCAGCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAAACAGACAGAGGAAAAGCAAACTCTTCCTGCAGGAGCAGCCCCA  450

seq1  CTCTGAAGGCCCCTCCACAGCTGCGAGACGGGCCACCTGGGCCACGGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAGGCCCCTCCACAGCTGCGAGACGGGCCACCTGGGCCACGGCCC  500

seq1  CTTTCAATAGCTGGATATCCTGTTCAGTTTTGCTCCTGCAGAGCTGTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATAGCTGGATATCCTGTTCAGTTTTGCTCCTGCAGAGCTGTCCA  550

seq1  GGACAATCGCCTGGGAAGTGAATTGTTACTTTCCAGGGGTTTTAAGCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATCGCCTGGGAAGTGAATTGTTACTTTCCAGGGGTTTTAAGCTTG  600

seq1  CCAAGATTAGTTAGGAAAACACAGTTTGGGGTTATACAAATTCCAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATTAGTTAGGAAAACACAGTTTGGGGTTATACAAATTCCAAATAT  650

seq1  TCTGGCTCCCTTGTTGCCTGAAATTCGAGAGAAAGAAAAAGTATTTGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTCCCTTGTTGCCTGAAATTCGAGAGAAAGAAAAAGTATTTGTGG  700

seq1  TGTTTGTGAGTTTACATGTGTTTTGAAGCAAGAGTTCCTGTATGAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGAGTTTACATGTGTTTTGAAGCAAGAGTTCCTGTATGAAAATA  750

seq1  TATAAATTATCAGATGTTTCTGTATGCAAGCCACCACATCCTTTAAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATTATCAGATGTTTCTGTATGCAAGCCACCACATCCTTTAAAATG  800

seq1  GAACAATTAAAATACAGGCACTCCCTGTGTGCCTCTAGGAATAACAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATTAAAATACAGGCACTCCCTGTGTGCCTCTAGGAATAACAAGCC  850

seq1  AAAACTGTTCTTAGATATGACAAAGAAACGCTGACTGTGAAGGTCCAAAA  900
      || ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATACTGTTCTTAGATATGACAAAGAAACGCTGACTGTGAAGGTCC-AAA  899

seq1  GCATTGTTTAAACTTCACTGGATATACAATGGCTTCAAATTTTAGAAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCATTGTTTAAACTTCACTGGATATACAATGGCTTCAAATTTTAG-AAAT  948

seq1  GTATTCATTTAAAATTGTCTTAATGATCTAGAAAGAAATAGAACTAATAA  1000
      |||||||||| |||||||||| ||||||||| ||||||    ||||||||
seq2  GTATTCATTT-AAATTGTCTT-ATGATCTAG-AAGAAA---GACTAATAA  992

seq1  TAAAAAGGGAGAGAGAGAGACAGAGACAGAGAGACAGAGAGAGACAGAGA  1050
      | ||||||||||||||||||| ||||| ||||||| ||||||||| ||||
seq2  T-AAAAGGGAGAGAGAGAGAC-GAGAC-GAGAGAC-GAGAGAGAC-GAGA  1037

seq1  GTGCTCTGTGACTAAGACCATTTACTATACAGTCAGGAGGA  1091
      |||||||||||||||||||| ||||||| |||||| |||||
seq2  GTGCTCTGTGACTAAGACCA-TTACTAT-CAGTCA-GAGGA  1075


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