BAC Information

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BAC

Clone NameB6Ng01-159M06
Chromosome10 (Build37)
Map Location 82,462,015 - 82,654,634
singlet/doubletdoublet
Overlap geneChst11
Upstream geneEG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185
Downstream geneSlc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225, C230099D08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159M06.bB6Ng01-159M06.g
ACCDH953333DH953334
length1,0691,028
definitionDH953333|Mus musculus domesticus DNA, BAC clone: B6Ng01-159M06, 5' end.DH953334|Mus musculus domesticus DNA, BAC clone: B6Ng01-159M06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,462,015 - 82,463,100)(82,653,604 - 82,654,634)
sequence
gaattccagtgtgtccttggcacttgtctgtctgttcagtgtagcccctt
tccagtgctcagtcacctctgtgagtagtggctgctggaccctgttagag
tagctgaaaagatgggggaaatgttcctggtgttccccccaccccttttg
tgaattgatgttctctcttgggtttgagctccatccttggggaggtattg
agtaagagaagctggctggagaactatatgtgtgtgcctaagccacttga
gcctgaaaggtacctagttagttcattggtgaactaactctacttagtgc
aagcttctaggtagttcattggtgaactcccggggcttgccttgttcagg
gatcctagcaaactgcaccgttccaacccatctctagaagaggcagcaag
acagggcacccttggagagacttatgtttcctttatgatgccccagcaca
aagcctggccccaggaagatgtgttgtaccgagatggacagaaatatgca
cgatggactggtttagggggccagacacgatggggttatggagaaccaac
ggagagagcgagagaatagtgtggttgattttgattgtagcatcaatcaa
caagggaagaatttccaggctcagagactgagagagaagcagttgcgtca
ctgggcctcggaggctggagtatggacaggagtgctggctgtcacctcat
tatctcttgttctcaagtttaaattctgttcttgagactaggaagctata
gaaggtttagggttttgttttcagaagatgaaatttaagcttaatttaaa
ctctcttgttttagcacaaagtcagaatttaaaggcctacttttctcaaa
gtgatcttggggccatttttggaatcgtttctgtatcatttggtgggagg
gaaggttattcacgaacgttcaaagtagaagtagctaaagctctcttggc
tggattcaaaactcactgttgcaaactataagcctggaagtagtttcatc
tctcagttgctaatgggtctccaggtcactctcagaggctctgagagagt
gcaggagaagtgggagtgt
gaattcttttgacaaataaaaatcttaaattaaaaagcaggattctctcc
ctctcccccaaccacccctccccctcccctccgcagccctctaatccaac
ttcaggtagtttggcactgagtagttgaacattaaaaagtccagtttgta
gacttcgtacagctgtgtctggtgctcggcgctgatgttctggaagaact
ccgtggtcatctcgtcggtagttcgggtggactttgcataggtggggaac
ttcaggtagccgctcactccggccagctgcagtacgtaattggagtcctc
ctccagtgtctcatacttgcccacgaggtcgtagtggatgtggcacgggt
ggcagagagagtagaccgtctgccagtgctcgttgaagggctcctcccgc
tgggtgtgggggtcgatgaggtaggccacgaactcctcgaacttgacatc
gtcccccttgcgcagggcctcctgcgtggcgttcttccgctggcgtcgga
tgatcttggtgccgtagcgcttgtggaaggaggtgttgtacttctgcgtg
aacttgttgcggtaggcagacaccagcctctcgaagggttcccgcacgaa
caggaacttcatgtagcttttcaagcggtggttgatctctgggatgctgt
actggttaagggtcttcaggttggccgacacgtgggcttcgttggctggg
atctccatgggatcgctgtacttgccccggccactcaggaccatcatgag
cctcttccagttggtgcacgctaccttgggcacatagcagtagatgagtt
cgtggtcctcatccaccaccaggtgcttcagtcgttgggggtcagcaccc
tgcgcttgcgctcatggcactgttggcccggcaggtgtctgtcacctggt
cccgtctcatcttggtgcaagatggcagtgttgatagctccagctgcaga
ggggaacgaagaaggaaggagaagatgattgcttatctggattaccggga
agctgattcctttgttcaagcagttatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_82462015_82463100
seq2: B6Ng01-159M06.b_46_1114

seq1  GAATTCCAGTGTGTCCTTGGCACTTGTCTGTCTGTTCAGTGTAGCCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGTGTCCTTGGCACTTGTCTGTCTGTTCAGTGTAGCCCCTT  50

seq1  TCCAGTGCTCAGTCACCTCTGTGAGTAGTGGCTGCTGGACCCTGTTAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGCTCAGTCACCTCTGTGAGTAGTGGCTGCTGGACCCTGTTAGAG  100

seq1  TAGCTGAAAAGATGGGGGAAATGTTCCTGGTGTTCCCCCCACCCCTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAAAAGATGGGGGAAATGTTCCTGGTGTTCCCCCCACCCCTTTTG  150

seq1  TGAATTGATGTTCTCTCTTGGGTTTGAGCTCCATCCTTGGGGAGGTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGATGTTCTCTCTTGGGTTTGAGCTCCATCCTTGGGGAGGTATTG  200

seq1  AGTAAGAGAAGCTGGCTGGAGAACTATATGTGTGTGCCTAAGCCACTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGAAGCTGGCTGGAGAACTATATGTGTGTGCCTAAGCCACTTGA  250

seq1  GCCTGAAAGGTACCTAGTTAGTTCATTGGTGAACTAACTCTACTTAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAAGGTACCTAGTTAGTTCATTGGTGAACTAACTCTACTTAGTGC  300

seq1  AAGCTTCTAGGTAGTTCATTGGTGAACTCCCGGGGCTTGCCTTGTTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTAGGTAGTTCATTGGTGAACTCCCGGGGCTTGCCTTGTTCAGG  350

seq1  GATCCTAGCAAACTGCACCGTTCCAACCCATCTCTAGAAGAGGCAGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTAGCAAACTGCACCGTTCCAACCCATCTCTAGAAGAGGCAGCAAG  400

seq1  ACAGGGCACCCTTGGAGAGACTTATGTTTCCTTTATGATGCCCCAGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCACCCTTGGAGAGACTTATGTTTCCTTTATGATGCCCCAGCACA  450

seq1  AAGCCTGGCCCCAGGAAGATGTGTTGTACCGAGATGGACAGAAATATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGGCCCCAGGAAGATGTGTTGTACCGAGATGGACAGAAATATGCA  500

seq1  CGATGGACTGGTTTAGGGGGCCAGACACGATGGGGTTATGGAGAACCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGACTGGTTTAGGGGGCCAGACACGATGGGGTTATGGAGAACCAAC  550

seq1  GGAGAGAGCGAGAGAATAGTGTGGTTGATTTTGATTGTAGCATCAATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGCGAGAGAATAGTGTGGTTGATTTTGATTGTAGCATCAATCAA  600

seq1  CAAGGGAAGAATTTCCAGGCTCAGAGACTGAGAGAGAAGCAGTTGCGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAGAATTTCCAGGCTCAGAGACTGAGAGAGAAGCAGTTGCGTCA  650

seq1  CTGGGCCTCGGAGGCTGGAGTATGGACAGGAGTGCTGGCTGTCACCTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCTCGGAGGCTGGAGTATGGACAGGAGTGCTGGCTGTCACCTCAT  700

seq1  TATCTCTTGTTCTCAAGTTTAAATTCTGTTCTTGAGACTAGGAAGCTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTGTTCTCAAGTTTAAATTCTGTTCTTGAGACTAGGAAGCTATA  750

seq1  GAAGGTTTAGGGTTTTGTTTTCCAGAAGATGAAATTTAAGCTTAATTTAA  800
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAAGGTTTAGGGTTTTGTTTT-CAGAAGATGAAATTTAAGCTTAATTTAA  799

seq1  ACTCTCTTGTTTTAGCACAAAGCCAGAATTTAAAGGCCTAC-TTTCTCAA  849
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  ACTCTCTTGTTTTAGCACAAAGTCAGAATTTAAAGGCCTACTTTTCTCAA  849

seq1  AGTGATCTTGGGGCCATTTTTGGAATCGTTTCTGTTATCATTTGGTGGGA  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGTGATCTTGGGGCCATTTTTGGAATCGTTTCTG-TATCATTTGGTGGGA  898

seq1  GGGAAGGTTATTCACGAACGTTCAAAGTAAGAAGTAGCTTAAAAGCTCTC  949
      |||||||||||||||||||||||||||| ||||||||||  |||||||||
seq2  GGGAAGGTTATTCACGAACGTTCAAAGT-AGAAGTAGCT--AAAGCTCTC  945

seq1  TTTGGCTGGATTCAAAACTCACTGTTTGCAAAAATTATAGGCCTGGGAGG  999
       ||||||||||||||||||||||| ||||  ||| |||| |||||| || 
seq2  -TTGGCTGGATTCAAAACTCACTG-TTGC--AAACTATAAGCCTGGAAG-  990

seq1  TTAAGTTTCACTCTCTCAGTTGCTAATGGTGCCCCAGGTTCACTCTCAGA  1049
         ||||||| ||||||||||||||||||  | ||||| |||||||||||
seq2  --TAGTTTCA-TCTCTCAGTTGCTAATGGGTCTCCAGG-TCACTCTCAGA  1036

seq1  GGGCCTCTGGAGGAGTGGCAGGAGGGAGGGGGAGTGT  1086
      ||  |||||   |||| |||||| | || ||||||||
seq2  GG--CTCTGAGAGAGT-GCAGGA-GAAGTGGGAGTGT  1069

seq1: chr10_82653604_82654634
seq2: B6Ng01-159M06.g_70_1097 (reverse)

seq1  GATAACTGCTTGAACAAAGGGATCAGCTTTCCACGGTAATCACAGATAAG  50
      |||||||||||||||||||| ||||||||  | |||||||| ||||||||
seq2  GATAACTGCTTGAACAAAGGAATCAGCTT--CCCGGTAATC-CAGATAAG  47

seq1  CACTCATC-TCTCCTTCCTTC-TCTGTCCCCTCTGCAGCTGGAGCTATCC  98
      || ||||| |||||||||||| ||  |||||||||||||||||||||| |
seq2  CAATCATCTTCTCCTTCCTTCTTCGTTCCCCTCTGCAGCTGGAGCTAT-C  96

seq1  AACACTGCCATCCTGCACC-AGATGAGACGGGACCAGGTGACAGACACCT  147
      |||||||||||| |||||| ||||||||||||||||||||||||||||||
seq2  AACACTGCCATCTTGCACCAAGATGAGACGGGACCAGGTGACAGACACCT  146

seq1  GCCGGGCCAACAGTGCCATGAGCCGCAAGCGCAGGGTGCTGACCCCCAAC  197
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCCGGGCCAACAGTGCCATGAG-CGCAAGCGCAGGGTGCTGACCCCCAAC  195

seq1  GACCTGAAGCACCTGGTGGTGGATGAGGACCACGAACTCATCTACTGCTA  247
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GA-CTGAAGCACCTGGTGGTGGATGAGGACCACGAACTCATCTACTGCTA  244

seq1  TGTGCCCAAGGTAGCGTGCACCAACTGGAAGAGGCTCATGATGGTCCTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCAAGGTAGCGTGCACCAACTGGAAGAGGCTCATGATGGTCCTGA  294

seq1  GTGGCCGGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCGGGGCAAGTACAGCGATCCCATGGAGATCCCAGCCAACGAAGCC  344

seq1  CACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAGCATCCCAGAGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGTCGGCCAACCTGAAGACCCTTAACCAGTACAGCATCCCAGAGAT  394

seq1  CAACCACCGCTTGAAAAGCTACATGAAGTTCCTGTTCGTGCGGGAACCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACCGCTTGAAAAGCTACATGAAGTTCCTGTTCGTGCGGGAACCCT  444

seq1  TCGAGAGGCTGGTGTCTGCCTACCGCAACAAGTTCACGCAGAAGTACAAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGAGGCTGGTGTCTGCCTACCGCAACAAGTTCACGCAGAAGTACAAC  494

seq1  ACCTCCTTCCACAAGCGCTACGGCACCAAGATCATCCGACGCCAGCGGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTTCCACAAGCGCTACGGCACCAAGATCATCCGACGCCAGCGGAA  544

seq1  GAACGCCACGCAGGAGGCCCTGCGCAAGGGGGACGATGTCAAGTTCGAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCCACGCAGGAGGCCCTGCGCAAGGGGGACGATGTCAAGTTCGAGG  594

seq1  AGTTCGTGGCCTACCTCATCGACCCCCACACCCAGCGGGAGGAGCCCTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGTGGCCTACCTCATCGACCCCCACACCCAGCGGGAGGAGCCCTTC  644

seq1  AACGAGCACTGGCAGACGGTCTACTCTCTCTGCCACCCGTGCCACATCCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGCACTGGCAGACGGTCTACTCTCTCTGCCACCCGTGCCACATCCA  694

seq1  CTACGACCTCGTGGGCAAGTATGAGACACTGGAGGAGGACTCCAATTACG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGACCTCGTGGGCAAGTATGAGACACTGGAGGAGGACTCCAATTACG  744

seq1  TACTGCAGCTGGCCGGAGTGAGCGGCTACCTGAAGTTCCCCACCTATGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAGCTGGCCGGAGTGAGCGGCTACCTGAAGTTCCCCACCTATGCA  794

seq1  AAGTCCACCCGAACTACCGACGAGATGACCACGGAGTTCTTCCAGAACAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCACCCGAACTACCGACGAGATGACCACGGAGTTCTTCCAGAACAT  844

seq1  CAGCGCCGAGCACCAGACACAGCTGTACGAAGTCTACAAACTGGACTTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCCGAGCACCAGACACAGCTGTACGAAGTCTACAAACTGGACTTTT  894

seq1  TAATGTTCAACTACTCAGTGCCAAACTACCTGAAGTTGGATTAGAGGGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTCAACTACTCAGTGCCAAACTACCTGAAGTTGGATTAGAGGGCT  944

seq1  GCGGAGGGGAGGGGGAGGGGTGGTTGGGGGAGAGGGAGAGAATCCTGCTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGGGGAGGGGGAGGGGTGGTTGGGGGAGAGGGAGAGAATCCTGCTT  994

seq1  TTTAATTTAAGATTTTTATTTGTCAAAAGAATTC  1031
      ||||||||||||||||||||||||||||||||||
seq2  TTTAATTTAAGATTTTTATTTGTCAAAAGAATTC  1028