BAC Information

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BAC

Clone NameB6Ng01-160F19
Chromosome10 (Build37)
Map Location 104,054,216 - 104,054,575
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160F19.bB6Ng01-160F19.g
ACCDH953757DH953758
length1,229943
definitionDH953757|Mus musculus domesticus DNA, BAC clone: B6Ng01-160F19, 5' end.DH953758|Mus musculus domesticus DNA, BAC clone: B6Ng01-160F19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatcaaaataatgcataagacaagtattttcattcaaggtgttt
tcactatataacttaatattttagcaagagaaacaagacaaaggggatgc
aaattaaaaaaataatggtcaaagtacaacaaccttcagatgatacaata
atataaatgagcaaaagcaaaaatccaacctggtaactgccacatttgaa
aaacaattactgtgtagtatactgatacaaaggtatcttaaaattattat
tagcccacctttatacaaatgattaatggagtataaaggaaatcaatgaa
acattacccttcaaagtagctacaatatatataaaaatatctggttgtaa
ctgtaaccaaggaaatgtaagtccagtgtatcaagatcttcaagtcactg
aagaaagaaagtaactatatcagaaaatggaaagatcaccctgtcatgtt
ttggaaagattaacagaaataattttcttcctgctaatagcaatctacag
attgaatttaattcccattaaattttctgcacaatttattatacaactta
aattaaaaattctcagtgtcacatttcaacacaaataaatcattacagct
acaaaattattgcacaataaaacagctattggaggtattaacattctgtt
atcaagctgtactttacagctgtaacaaaatattatatggtattggtgaa
gacaaagataaattgatttataaaatttaatattgaaaacacaaatataa
agctgtatacctagggacacttggttttttgacaaagaagtcataatata
cattgaagaaaagaaagtatctttgacaaatggtgctggtctaactggat
ctctgcatgttgaagaatgaatacagatccatatttattgctgtgaagaa
actcaagtctatatggatcaaatacatcagataaaacatgatccactaag
tcttacttattgcagagaactggagagagggtgaatatattggcatagga
aacatttttctaaaggaacatgacagttttgtcagtagatcagccattag
aattgaacttcacaaaaccaaaatatttttataggcagagataatggtca
aagttcaaaggccacatatatttgggaaggatcgcctaccccttcttcct
tcatcgtctcatgctcgtcgtctctcattcatcctattatcccgcaccct
atccttcgaggctcggctcgttactgcat
gaattctcagcccctctgcatcatgcctgattggaagaagccatgctgct
accttgatgataattgactggacctgtgaactactaagccaacacaaatt
aaatgttttgcttttatgcattgctttttttatggtgtttttatagcatt
caaaacctatgacgttgtattacacaatatttctatatttctaaaatata
attgataatcagtgtctattttatttcattaataacattgaattgatatt
ttaaaatataaatatagtattatcttagtgttcaaatttctatcaacaat
atttggaacaacaacacccttcacaatacgcagaagtggaataaagtatc
ttggtgtaatacttaacaggtaaatgaaaaatctatatgacaataacgtc
aagaaatccttagaaaatggagagaactccaatactcatagattggtatg
atcaacatagtaaatatggcgattctactaaaagcaatcaacacattcaa
agcaatcaccatcaatattctaacacacttcttcacaaacattgaaagag
aaattcttaatttcatatagaaaaacaaaaccccagcattgacaaatggg
acctcatgaaactccaaagcttctgcaaggcaaaagacaccgtcaataag
acaaaaagaccaccgacagattgggaaaggatctttacctatcctaaatc
agataggggactaatatccaacatatataaaaactcaataaggtggactt
cagaaaataaaataaccccattaaaaaatggggatcagaactgaacaaag
aattctcacctgaggaataccgaatggcagagaagcatctgaaaaatgtc
aacatccttaatcatcaggaaatgcaaatcaaacaccctgagattccact
cacactagtcagatgctagatcaaaattcagtgacaacacatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104054216_104054575
seq2: B6Ng01-160F19.g_653_1000 (reverse)

seq1  TGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAAT  50
      ||||| ||||| |||||||| ||||   ||||||| |||||| |||||||
seq2  TGTCA-CTGAA-TTTTGATC-TAGC--ATCTGACTAGTGTGA-GTGGAAT  44

seq1  CTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACA  100
      ||||||||   |||||||||||||| |||||||||||||||||||| |||
seq2  CTCAGGGT--GTTTGATTTGCATTT-CCTGATGATTAAGGATGTTG-ACA  90

seq1  TTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTT  150
       |||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTTCAGATGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTT  139

seq1  TGTTCAGTTCTGAGCCCCATTTTTTAATAGGGTTATTTGATTTTCTGAAG  200
      ||||||||||||| |||||||||||||| ||||||||| |||||||||||
seq2  TGTTCAGTTCTGATCCCCATTTTTTAATGGGGTTATTTTATTTTCTGAAG  189

seq1  TCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGA  250
      |||||||| ||||||| |||||||||||||||||||||||||||||||||
seq2  TCCACCTTATTGAGTT-TTTATATATGTTGGATATTAGTCCCCTATCTGA  238

seq1  ATTAGGATAGGTAAAGATCCTTTCTCAATCTGTTGGTGGTCTTTTTGTCT  300
       ||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  TTTAGGATAGGTAAAGATCCTTTCCCAATCTGTCGGTGGTCTTTTTGTCT  288

seq1  TATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTATGAGGTCC  350
      |||||||||||||||||||||||||||||||||| | ||| |||||||||
seq2  TATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGGAGTTTCATGAGGTCC  338

seq1  CATTTATCAA  360
      ||||| ||||
seq2  CATTTGTCAA  348