BAC Information

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BAC

Clone NameB6Ng01-160G13
Chromosome10 (Build37)
Map Location 98,141,513 - 98,282,350
singlet/doubletdoublet
Overlap geneEG432494
Upstream geneEpyc, 4921510H08Rik, EG667438
Downstream geneAtp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160G13.bB6Ng01-160G13.g
ACCDH953789DH953790
length1,005776
definitionDH953789|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G13, 5' end.DH953790|Mus musculus domesticus DNA, BAC clone: B6Ng01-160G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,141,513 - 98,142,530)(98,281,580 - 98,282,350)
sequence
gaattctgtgaatgcatgtgctaaacagtggtgcttatgtaaaataaaga
ggcagaagagaaaccaccaagcactcaggacattttgagaattctgagaa
gctggggataatgaactaggtttttttttcattcctccaaagtaaatctt
tgtaaaaactaaagtaattaagacatcaaattacacaaacttaagtgtta
aggtagccttgaagcctaaaacccaaacaggagcaaacaagtcaccatac
acactagccagtctatgtttaaatgtatgtcaaaaaaaatgatatttaca
gtaaaattattcaaaataggaggagaggtcaaataaaagatgggatgttt
tatgttttatatattttattttatttcttaaatatattaaatcaaaccat
tttatagtgattaaatcatgtaggatgctagtaagtatctacaaaaattt
cataacaaggatagtgtagtgacggactgctcacctatctgtcatttacc
accatgattctgtaagtcgttaagggataggaccgtttctatgtacttct
cattcacagactcagaagccagcacatgatggggctttaaatttatactt
ttcaagtaagcagtaactaaaagaatgaacagaaagccgattttaattca
caactggtgacattaggctaaagaatgatgactggtcatccaactagaga
ggtttatatactgtctcactacacacacacacacacacacacacacacac
acacacacacacacacacacacacacacactcacataaaacctgaaagta
agaaattaatttggttatatcattagggaaagtgggatcccagagagtct
atggagctgacccagagcgacagtgtaggattactgagagtctcacgcca
catgtctagtggcttcagactcaatctttctcgctggctgtcacactgtc
tacttgaagtaagaacctggtggcaggaagatccatactacaatgtgaga
ggaaa
gaattcattactatgagtgcggaatttaaagtgcctggaaacctgcagca
gtcagacctgcagaacacacaatagtgaaatagaaaacccgagctttgta
actagagacgaagcttcaccactgagctgggtcaaacacaccaggcatgt
cactagcctcagcttcattgttctcattaacaaattaaaggcaaattaaa
aataaaaaatacaggtatggaaaataaagtccaaagtttagagaaacttt
gtgaatattctaaaacctttggattctgtagctttgttttgtactacaga
gattcggaagggagagaatggattaaaaaagagtgaacactgacattctg
caaaactactgttaaaatttaggcaagtatttattaagacgattttctgc
atatatatacatatatatatgtatacatatatatatgtatatatgaagct
gtagaattatgtatatatctaatatattgatgaagacacagaatgaatta
catacatatctaatatgatatatatataaatttctctttctatataagtg
tgtgtgtgtgtgtttgtgtgtgtgtgtgtacgtacatgcacagtatatgt
gtgggaaagtaaaaagaccacctttggatgttaatcctcacactgcttcc
cacgtttgtgtttgagaccaggtctcctattgacctcaacttcaccaact
agcatagctgcttgagtgagcttctaggtggtggagttttcagggatctg
gcttttgtgtcctccttcttaactcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98141513_98142530
seq2: B6Ng01-160G13.b_47_1051

seq1  GAATTCTGTGAATGCATGTGCTAAACAGTGGTGCTTATGTAAAATAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAATGCATGTGCTAAACAGTGGTGCTTATGTAAAATAAAGA  50

seq1  GGCAGAAGAGAAACCACCAAGCACTCAGGACATTTTGAGAATTCTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAGAGAAACCACCAAGCACTCAGGACATTTTGAGAATTCTGAGAA  100

seq1  GCTGGGGATAATGAACTAGGTTTTTTTTTCATTCCTCCAAAGTAAATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGATAATGAACTAGGTTTTTTTTTCATTCCTCCAAAGTAAATCTT  150

seq1  TGTAAAAACTAAAGTAATTAAGACATCAAATTACACAAACTTAAGTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAACTAAAGTAATTAAGACATCAAATTACACAAACTTAAGTGTTA  200

seq1  AGGTAGCCTTGAAGCCTAAAACCCAAACAGGAGCAAACAAGTCACCATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCCTTGAAGCCTAAAACCCAAACAGGAGCAAACAAGTCACCATAC  250

seq1  ACACTAGCCAGTCTATGTTTAAATGTATGTCAAAAAAAATGATATTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGCCAGTCTATGTTTAAATGTATGTCAAAAAAAATGATATTTACA  300

seq1  GTAAAATTATTCAAAATAGGAGGAGAGGTCAAATAAAAGATGGGATGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTATTCAAAATAGGAGGAGAGGTCAAATAAAAGATGGGATGTTT  350

seq1  TATGTTTTATATATTTTATTTTATTTCTTAAATATATTAAATCAAACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTATATATTTTATTTTATTTCTTAAATATATTAAATCAAACCAT  400

seq1  TTTATAGTGATTAAATCATGTAGGATGCTAGTAAGTATCTACAAAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGTGATTAAATCATGTAGGATGCTAGTAAGTATCTACAAAAATTT  450

seq1  CATAACAAGGATAGTGTAGTGACGGACTGCTCACCTATCTGTCATTTACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACAAGGATAGTGTAGTGACGGACTGCTCACCTATCTGTCATTTACC  500

seq1  ACCATGATTCTGTAAGTCGTTAAGGGATAGGACCGTTTCTATGTACTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATTCTGTAAGTCGTTAAGGGATAGGACCGTTTCTATGTACTTCT  550

seq1  CATTCACAGACTCAGAAGCCAGCACATGATGGGGCTTTAAATTTATACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACAGACTCAGAAGCCAGCACATGATGGGGCTTTAAATTTATACTT  600

seq1  TTCAAGTAAGCAGTAACTAAAAGAATGAACAGAAAGCCGATTTTAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTAAGCAGTAACTAAAAGAATGAACAGAAAGCCGATTTTAATTCA  650

seq1  CAACTGGTGACATTAGGCTAAAGAATGATGACTGGTCATCCAACTAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGTGACATTAGGCTAAAGAATGATGACTGGTCATCCAACTAGAGA  700

seq1  GGTTTATATACTGTCTCACTACACACACACACACACACACACACACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATATACTGTCTCACTACACACACACACACACACACACACACACAC  750

seq1  ACACACACACACACACACACACACACACACTCACATAAAACCTGAAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACTCACATAAAACCTGAAAGTA  800

seq1  AGAAATTAATTTGGTTATATCATTAGGGAAAGTGGGATCCCAGAGAGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAATTTGGTTATATCATTAGGGAAAGTGGGATCCCAGAGAGTCT  850

seq1  ATGGAGCTGACCCAGAGCGACAGTGTAGGATTACTGAAGAGTCTCACGCA  900
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  ATGGAGCTGACCCAGAGCGACAGTGTAGGATTACTG-AGAGTCTCACGCC  899

seq1  CCATGTCTAGTGGGCTTCAGAACTCAATCTTTCCTTCGCTGGCTGTCACA  950
       |||||||||| |||||||| ||||||||||||  |||||||||||||||
seq2  ACATGTCTAGT-GGCTTCAG-ACTCAATCTTTC--TCGCTGGCTGTCACA  945

seq1  CTGTCTACTTGAAGGTAAAGAAACCTGGTGGCCAGGAAAGATTCCATACC  1000
      ||||||||||||| ||||   |||||||||| |||| |||| |||||| |
seq2  CTGTCTACTTGAA-GTAA--GAACCTGGTGG-CAGG-AAGA-TCCATA-C  988

seq1  TACAAATGTGAGAGGAAA  1018
      ||| ||||||||||||||
seq2  TAC-AATGTGAGAGGAAA  1005

seq1: chr10_98281580_98282350
seq2: B6Ng01-160G13.g_68_843 (reverse)

seq1  CGAG-TAAG-ATGAGGACACAAAAGGCAGATCCCTGAAAACTCCACCACC  48
      |||| |||| | ||||||||||||| ||||||||||||||||||||||||
seq2  CGAGTTAAGAAGGAGGACACAAAAGCCAGATCCCTGAAAACTCCACCACC  50

seq1  TAGAAGCTCACTC-AGCAGCTATGCTAGTTGGTGAAGTTTGAGGTCAATA  97
      ||||||||||||| ||||||||||||||||||||||| ||||||||||||
seq2  TAGAAGCTCACTCAAGCAGCTATGCTAGTTGGTGAAG-TTGAGGTCAATA  99

seq1  GGAGACCTGGTCTCAAACAC-AACGTGGGAAGCAGTGTGAGGATTAACAT  146
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGAGACCTGGTCTCAAACACAAACGTGGGAAGCAGTGTGAGGATTAACAT  149

seq1  CC-AAGGTGGTCTTTTTACTTT-CCACACATATACTGTGCATGTAAGTAC  194
      || ||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  CCAAAGGTGGTCTTTTTACTTTCCCACACATATACTGTGCATGTACGTAC  199

seq1  ACACACACACACAAACACACACACACACACTTATATAGAAAGAGAAATTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACAAACACACACACACACACTTATATAGAAAGAGAAATTT  249

seq1  ATATATATATCATATTAGATATGTATGTAATTCATTCTGTGTCTTCATCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATCATATTAGATATGTATGTAATTCATTCTGTGTCTTCATCA  299

seq1  ATATATTAGATATATACATAATTCTACAGCTTCATATATACATATATATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAGATATATACATAATTCTACAGCTTCATATATACATATATATA  349

seq1  TGTATACATATATATATGTATATATATGCAGAAAATCGTCTTAATAAATA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACATATATATATGTATATATATGCAGAAAATCGTCTTAATAAATA  399

seq1  CTTGCCTAAATTTTAACAGTAGTTTTGCAGAATGTCAGTGTTCACTCTTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTAAATTTTAACAGTAGTTTTGCAGAATGTCAGTGTTCACTCTTT  449

seq1  TTTAATCCATTCTCTCCCTTCCGAATCTCTGTAGTACAAAACAAAGCTAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCATTCTCTCCCTTCCGAATCTCTGTAGTACAAAACAAAGCTAC  499

seq1  AGAATCCAAAGGTTTTAGAATATTCACAAAGTTTCTCTAAACTTTGGACT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCAAAGGTTTTAGAATATTCACAAAGTTTCTCTAAACTTTGGACT  549

seq1  TTATTTTCCATACCTGTATTTTTTATTTTTAATTTGCCTTTAATTTGTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCATACCTGTATTTTTTATTTTTAATTTGCCTTTAATTTGTTA  599

seq1  ATGAGAACAATGAAGCTGAGGCTAGTGACATGCCTGGTGTGTTTGACCCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAACAATGAAGCTGAGGCTAGTGACATGCCTGGTGTGTTTGACCCA  649

seq1  GCTCAGTGGTGAAGCTTCGTCTCTAGTTACAAAGCTCGGGTTTTCTATTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTGGTGAAGCTTCGTCTCTAGTTACAAAGCTCGGGTTTTCTATTT  699

seq1  CACTATTGTGTGTTCTGCAGGTCTGACTGCTGCAGGTTTCCAGGCACTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATTGTGTGTTCTGCAGGTCTGACTGCTGCAGGTTTCCAGGCACTTT  749

seq1  AAATTCCGCACTCATAGTAATGAATTC  771
      |||||||||||||||||||||||||||
seq2  AAATTCCGCACTCATAGTAATGAATTC  776