BAC Information

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BAC

Clone NameB6Ng01-160J09
Chromosome10 (Build37)
Map Location 101,318,149 - 101,319,221
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160J09.bB6Ng01-160J09.g
ACCDH953921DH953922
length1,1211,064
definitionDH953921|Mus musculus domesticus DNA, BAC clone: B6Ng01-160J09, 5' end.DH953922|Mus musculus domesticus DNA, BAC clone: B6Ng01-160J09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagactgtcaaagtacttttaaactacactgtagaatagaa
acagaaaccaccaaagtcattttacaaaaccgtagtcacctgaataccta
aaccatacaaagattcaacaaagaaagagaactgcagactggtttctctt
atgcacactgaggcagaaatactaaattaactactggcacagattccagg
gacaaataaaaaactatccaccatgatcaagtaggcttaatcccagggct
gcagggatgtttcaatatatgaaaatccatcaacataatccactgtataa
acaaatagaagaaattacattatcatctcattagacattgcaaaagcctt
tgactatatctaacaccccttcatgttaaaagtattagagaagtcaggga
tataaggcacatacctaaatataatttgagcaatatagagggagccaata
gccaacatcaaactaaatgtaaataaactgaaatcaattccactagaatc
aggaatgagacaaggctgcccactctcttcttatctattcagtatagtac
ttgaagttctagccagaataataagacaattaaaggagatcaaggggata
aaaattggaaggaaataagtcaagatactactatttgcaggtgatatgag
agtatataaaagggacaccaaaaattctaccacagatcccctgcagctga
taacaacttcggcaaagtggctggatacaaaattaactcaaataaattag
tagccctcatttataaaaacaataaatggtctgagaaagtaattagggaa
acaacactttacaggatgacatactacttagctaataaaaacaaagacct
gatgttttttcagcaaatatttggaacttgaaaatatcatccagagttag
gtaacccagtccagatagaatgtgcatggtatgtacctacttatatgttc
ttattacataaaatacgggatacccatgccacactccacagagccagaag
ctaacaagaaagaagacacaaggagatgcttggatctcaatagattgggg
agactaaataagatttagatagaggaaggaaaccgtgaggggagagggga
tttgggggtattatggggtga
gaattcaggttgtgaggcttattggcagtcacctttatctactgagccat
ctcacagttcccaatccttaatttttcacagtaattgtatctacttgcaa
gtatcaagcatgcttgaatggcactttcagtcttaaaaacatatctaaaa
taatcatagagttaaatatcacatgcattttgtgaactaaagtttctttg
aaaaccttaatggcaaaactgacaagtgaggtttaagtcatgtagtgttt
ggttttaatttttttttttggcttgctgaaatttgacagggaatgtatct
acatgtgacatttaacttttggttcattatgaatagagtgataatttttc
ttgcatataaataaaacatcaattaatagatctagggacagttaaagcaa
cttatttttttgctcagtatacaacacagaagaatattatgcttctataa
ttgataatataatatataatttatattttataatatagagaagctgggac
attttactcgggtagacagcacatgctgtatcatcattttacacatctta
atactatatatagttagaatgctcaatgccagcaagtatgatttatgtta
tactaatgtaccttttagcagctctgcttacctgctgagcagctatctta
ttataactgttttccaggctccctgtgctctcaaggagaagacaggctaa
gtaatgatactatttggaactgtatataatcatctcctataaaaacatct
agtcctgattccattatgttaattcactgcagagggaactgtacaattca
atcacaagaaaggttcagtgccttacggaggcctcttgacagcatacttg
gagtcccggttgaagaatttagcaaatccctttgtggtacattgagggct
taaagccataataaaccaacccctttacattgatttatcctctgaagtca
tgagaagctttcaggattggagattgggggttttttcttgtctgtcctat
ccaaacgtcactctagctgataataataatagacactttgctacttctag
aatcactatagcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101318149_101319221
seq2: B6Ng01-160J09.g_67_1130

seq1  GAATTCAGGTTGTGAGGCTTATTGGCAGTCACCTTTATCTACTGAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTGTGAGGCTTATTGGCAGTCACCTTTATCTACTGAGCCAT  50

seq1  CTCACAGTTCCCAATCCTTAATTTTTCACAGTAATTGTATCTACTTGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGTTCCCAATCCTTAATTTTTCACAGTAATTGTATCTACTTGCAA  100

seq1  GTATCAAGCATGCTTGAATGGCACTTTCAGTCTTAAAAACATATCTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAGCATGCTTGAATGGCACTTTCAGTCTTAAAAACATATCTAAAA  150

seq1  TAATCATAGAGTTAAATATCACATGCATTTTGTGAACTAAAGTTTCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATAGAGTTAAATATCACATGCATTTTGTGAACTAAAGTTTCTTTG  200

seq1  AAAACCTTAATGGCAAAACTGACAAGTGAGGTTTAAGTCATGTAGTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTAATGGCAAAACTGACAAGTGAGGTTTAAGTCATGTAGTGTTT  250

seq1  GGTTTTAATTTTTTTTTTTGGCTTGCTGAAATTTGACAGGGAATGTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAATTTTTTTTTTTGGCTTGCTGAAATTTGACAGGGAATGTATCT  300

seq1  ACATGTGACATTTAACTTTTGGTTCATTATGAATAGAGTGATAATTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGACATTTAACTTTTGGTTCATTATGAATAGAGTGATAATTTTTC  350

seq1  TTGCATATAAATAAAACATCAATTAATAGATCTAGGGACAGTTAAAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATATAAATAAAACATCAATTAATAGATCTAGGGACAGTTAAAGCAA  400

seq1  CTTATTTTTTTGCTCAGTATACAACACAGAAGAATATTATGCTTCTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTTTGCTCAGTATACAACACAGAAGAATATTATGCTTCTATAA  450

seq1  TTGATAATATAATATATAATTTATATTTTATAATATAGAGAAGCTGGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATATAATATATAATTTATATTTTATAATATAGAGAAGCTGGGAC  500

seq1  ATTTTACTCGGGTAGACAGCACATGCTGTATCATCATTTTACACATCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTCGGGTAGACAGCACATGCTGTATCATCATTTTACACATCTTA  550

seq1  ATACTATATATAGTTAGAATGCTCAATGCCAGCAAGTATGATTTATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATATATAGTTAGAATGCTCAATGCCAGCAAGTATGATTTATGTTA  600

seq1  TACTAATGTACCTTTTAGCAGCTCTGCTTACCTGCTGAGCAGCTATCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATGTACCTTTTAGCAGCTCTGCTTACCTGCTGAGCAGCTATCTTA  650

seq1  TTATAACTGTTTTCCAGGCTCCCTGTGCTCTCAAGGAGAAGACAGGCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAACTGTTTTCCAGGCTCCCTGTGCTCTCAAGGAGAAGACAGGCTAA  700

seq1  GTAATGATACTA-TTGGAACTGTATATAATCATCTCCTATAAAAACATCT  749
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTAATGATACTATTTGGAACTGTATATAATCATCTCCTATAAAAACATCT  750

seq1  AGTCCTGATTCCAATTATGTTAATTCACTGCAGAGGGAACTGTACAATTC  799
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGATTCC-ATTATGTTAATTCACTGCAGAGGGAACTGTACAATTC  799

seq1  AATCACAAG-AAGGTTCAGTGCCTTACGGAGGCCTCTTGACAGCATACTT  848
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAGAAAGGTTCAGTGCCTTACGGAGGCCTCTTGACAGCATACTT  849

seq1  GGAGTCCCGTTGGAAGAATTTAGCAAATCCCTTTGTGGTACA-TGAGGGC  897
      ||||||||| | |||||||||||||||||||||||||||||| |||||||
seq2  GGAGTCCCGGTTGAAGAATTTAGCAAATCCCTTTGTGGTACATTGAGGGC  899

seq1  TTAAAGCCATAATAAACCAACCCCTTTACATTGATTTATTCCTCTGAAGT  947
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTAAAGCCATAATAAACCAACCCCTTTACATTGATTTA-TCCTCTGAAGT  948

seq1  CAATGAGAGCTTTTCAGGGATTGGAGATTGGGGGTTTTTCTTTGTCTGTT  997
      | ||||||   ||||| ||||||||||||||||||||||  |||||||| 
seq2  C-ATGAGAAGCTTTCA-GGATTGGAGATTGGGGGTTTTTTCTTGTCTGT-  995

seq1  CACTATCCAAACGTCACTC-AGCTGATAAATAATAATAAGACAACTATTC  1046
        ||||||||||||||||| ||||||| ||||||||| |||||    || 
seq2  -CCTATCCAAACGTCACTCTAGCTGAT-AATAATAAT-AGACA---CTTT  1039

seq1  CCTACTTCTAGAATCACTAAATAGCAA  1073
       |||||||||||||||||  |||||||
seq2  GCTACTTCTAGAATCACT--ATAGCAA  1064