BAC Information

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BAC

Clone NameB6Ng01-160N10
Chromosome10 (Build37)
Map Location 67,151,548 - 67,152,549
singlet/doubletsinglet
Overlap genenone
Upstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081
Downstream geneLOC100039618, Zfp365, Plekhk1, Arid5b, LOC100040136, 1700040L02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160N10.bB6Ng01-160N10.g
ACCDH954108DH954109
length995728
definitionDH954108|Mus musculus domesticus DNA, BAC clone: B6Ng01-160N10, 5' end.DH954109|Mus musculus domesticus DNA, BAC clone: B6Ng01-160N10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcacctcactcaaagctaaaacacctcactaatattgcattta
tattcctaggtacctagttggaccttagcaataatagctgaccctatagt
attcattctcagagcattgatcacctcctgtgtagtccaggcggtgtgat
ggcattaatgacactgagacctaatcttctcttcagagttccctctgact
cggcatgcatgctatgacttgcagaaagcctgtccctctcaagtcaatgg
acaaagaaaggtatgggtgcctttctgaggcatactccctctacccagaa
ctgacaacttcttcctgaccctcacagtgtcttacttgaacaacttactt
gaacacacttctcaaggactgtcattgtttgaatatgcctggcccgggga
gtggcactatttggaggcgtggccttgttggagttggtgtgtcattgtgg
gcgtgggctttgagaccctcatcctaactccctggaagtcagtattcagc
tagcagccttcagatgaagatgtagacctctcagctactcctgcaccagg
cctgcctggatgctgccatgctcccaacttgatgataatggacctgtaag
gcagccccaatgaaatgttgtcctttataagacttgacttggtcatggtg
tctgttcacagaagtagaaccctaactaagacaaggactaaagcagcttt
gactggttaggcaacacaaatcttatcaatgattatttgccagcctaacc
ctcagaaagtctagccaagagtggtgcagttcatactcatgagctatcca
gtctttagagatgggggtgaggggcaggtacctaagagcaatgattgtta
tcttccatagtgcagacagtagttaagtggcctcacccaacccagggatc
atgaccttcttctagacctctttcaactgggcagaagggccagccttgtg
tattcttggaaaaaaaaaaaaaaccaagttcagtgaatgtctccc

gaattctccttccccatctctgattgaaggttaatctttgggatatctct
gaatttattttccataatcattcattttctcgaggaagtcctaaatctat
ctccatgcacagttgttttctgtttatgtttttttttaatgacacactaa
tgatttttcttaaaattcctttgaaaccatttatgtgtgcctgtctatta
gtgtaaatgtacacatacacactgtggtggtgtattaggaggccccctct
tgctggatggcgcgagaatgttgggattaaaggcatatgccaccactgca
aagggtagatttcttataccttatgaacactgaaaactgcaaatcttcta
agtgctgctttaactattatcatccacccccccaaaaaaaacccaaaaaa
caaaaccccaaacaaacaaaaacccagcactcacacacggggcttggggt
ggggtggggacagaggcagatgtctgtgtcccctgtgcttcccccccact
gtttcagcttgggtacgaaagggggcagatggaacaaggacacagacacg
tgaactggccccgagctacaggacaccgccaaaacacacaagacacatac
atactcacggagttaaaagaaagcacatgtcactgcggactagagataga
aaaattttatggtggggggtgacgacgcatgaaccgaactgtatatctgt
acgagaatcgaaagatctcactggtctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67151548_67152549
seq2: B6Ng01-160N10.b_43_1037

seq1  GAATTCATCACCTCAGTCAAAGCTAGAAAACCTCACTAATATTGCATTTA  50
      ||||||||||||||| ||||||||| || |||||||||||||||||||||
seq2  GAATTCATCACCTCACTCAAAGCTAAAACACCTCACTAATATTGCATTTA  50

seq1  TATTCCTAGGTACCTAG-TGGACCTTAGCAATAATAGCTGACCCTAGAGT  99
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TATTCCTAGGTACCTAGTTGGACCTTAGCAATAATAGCTGACCCTATAGT  100

seq1  ATTCATTCTCAGAGCAATGATCACCTCCTGTATAGTCCAGGCGGTGTGAT  149
      |||||||||||||||| |||||||||||||| ||||||||||||||||||
seq2  ATTCATTCTCAGAGCATTGATCACCTCCTGTGTAGTCCAGGCGGTGTGAT  150

seq1  GGCATTAAAGACACTGAGACCTAATCTTCTCTTCAGAGTTCCCTCTGACT  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTAATGACACTGAGACCTAATCTTCTCTTCAGAGTTCCCTCTGACT  200

seq1  CGGCATGCATGCTATGACATGCAGAAAGCAGGTCCCTCTCAAGTCAATGG  249
      |||||||||||||||||| ||||||||||  |||||||||||||||||||
seq2  CGGCATGCATGCTATGACTTGCAGAAAGCCTGTCCCTCTCAAGTCAATGG  250

seq1  ACAAAGAAAGGTATGGGTGCCTTTCTGAGGCATACTCCCTCTACCCAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAAGGTATGGGTGCCTTTCTGAGGCATACTCCCTCTACCCAGAA  300

seq1  CTGACAACTTCTTCCTGACCCTCACAGTGTCTTACTTGAACAACTTACTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAACTTCTTCCTGACCCTCACAGTGTCTTACTTGAACAACTTACTT  350

seq1  GAACACAGTTCTCAAGGACTGTCATTGTTTGAATATGCCTGGCCCGGGGA  399
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACACTTCTCAAGGACTGTCATTGTTTGAATATGCCTGGCCCGGGGA  400

seq1  GTGGCACTATTTGGAGGCGTGGCCTTGTTGGAGTTGGTGTGTCATTGTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTATTTGGAGGCGTGGCCTTGTTGGAGTTGGTGTGTCATTGTGG  450

seq1  GCGTGGGCTTTGAGACCCTCATCCTAACTCCCTGGAAGTCAGTATTCAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGGCTTTGAGACCCTCATCCTAACTCCCTGGAAGTCAGTATTCAGC  500

seq1  TAGCAGCCTTCAGATGAAGATGTAGACCTCTCAGCTACTCCTGCACCAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCCTTCAGATGAAGATGTAGACCTCTCAGCTACTCCTGCACCAGG  550

seq1  CCTGCCTGGATGCTGCCATGCTCCCAACTTGATGATAATGGACCTGTAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGGATGCTGCCATGCTCCCAACTTGATGATAATGGACCTGTAAG  600

seq1  GCAGCCCCAATGAAATGTTGTCCTTTATAAGACTTGACTTGGTCATGGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCCAATGAAATGTTGTCCTTTATAAGACTTGACTTGGTCATGGTG  650

seq1  TCTGTTCACAGAAGTAGAACCCTAACTAAGACAAGGACTAAAGCAGCTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCACAGAAGTAGAACCCTAACTAAGACAAGGACTAAAGCAGCTTT  700

seq1  GACTGGTTTAGGCAACACAAAATCTTATCAATGATTAGTTTGCCAGCCTA  749
      |||||| ||||||||||| |||||||||||||||||| ||||||||||||
seq2  GACTGG-TTAGGCAACAC-AAATCTTATCAATGATTA-TTTGCCAGCCTA  747

seq1  ACCCTCAGAAAGTCTAGCCAAGAGTGGTTGCAGTTCATACTCATGAGCTA  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACCCTCAGAAAGTCTAGCCAAGAGTGG-TGCAGTTCATACTCATGAGCTA  796

seq1  TCCAGTCTTTTAGAGAT-GGGGTGAGGGGCAGGTACCTAAGAGCCAATGA  848
      ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
seq2  TCCAGTC-TTTAGAGATGGGGGTGAGGGGCAGGTACCTAAGAG-CAATGA  844

seq1  TTGTTATCTTCCATAGTGCAGACAGTAGTTAAGTGGTCTCACCCAACCCA  898
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGTTATCTTCCATAGTGCAGACAGTAGTTAAGTGGCCTCACCCAACCCA  894

seq1  GGGGTCATGACCTTCTTCTAGACCTCTTTCAAACTGGGCAGAAGGTCCAG  948
      ||| |||||||||||||||||||||||||| |||||||||||||| ||||
seq2  GGGATCATGACCTTCTTCTAGACCTCTTTC-AACTGGGCAGAAGGGCCAG  943

seq1  CCTTGTGATTTCTTTGAAAAAAAAAAAAAACCAAGTTTCAGTAGAATGTC  998
      |||||||  ||||| |||||||||||||||||||| |||||| |||||||
seq2  CCTTGTGTATTCTTGGAAAAAAAAAAAAAACCAAG-TTCAGT-GAATGTC  991

seq1  TCCC  1002
      ||||
seq2  TCCC  995


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