BAC Information

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BAC

Clone NameB6Ng01-160P15
Chromosome10 (Build37)
Map Location 104,098,979 - 104,198,171
singlet/doubletdoublet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160P15.bB6Ng01-160P15.g
ACCDH954214DH954215
length1,1121,184
definitionDH954214|Mus musculus domesticus DNA, BAC clone: B6Ng01-160P15, 5' end.DH954215|Mus musculus domesticus DNA, BAC clone: B6Ng01-160P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,197,105 - 104,198,171)(104,098,979 - 104,100,193)
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttctacatccttaataatcagggaaatgcaaacaaaacaatcctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaaaactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggcagttcctcag
aaaattggacatagtactaccagacgatacagcaatacctctcccgggca
tatatccagaagatgtcccaacgggtaagaaggacacctgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
tccctcaacagaggaatggatacagaaaatgtggtacatttacacagtgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggtcctggagggcatcatcctgagtaaggtaacacaatcacaata
aatctttttttttaaaaaaaaaagaaaactaactcctacatttttgcttt
tactagggaacttactcacgcttaagttaattatatattttgttgtgttc
tgtgtccttgggaactaatcacaaaaaattttggtagaactgacccaacc
acccagcagcaatttctgcatctgtgtatgcgttttcatggtatttgctt
ttataaactgccccgtgagttgaaccccaacataagagatatgagaaact
atttaaatgagtcttccattttcgaatagggtttgagtaaaggtttaagt
tcccaagaccttcctgggaactgacattctacttggcagaaagaaacaga
tatgtgggacaactgacactctggttggcaagttaagacataaatggtag
accaggcaagctcctatcacaggtgacaccccaccaaggggagcagatga
gggtataacaaagacatattcttcaggaaatcccttattcctaaattctg
atggattaaatatttggcaagaatggtggataaattttggtttaaaggcc
ctgtaggacctg
gaattcaactccggctgtctaggaaggcaaatgaatgcagcttgtttggc
tatataccaatttaatgcaaagatcatgctccttatttataaccaagcta
gacttccatattttagcccagcagcattctaataagaaatctgcatgatc
tttatcattcacagaagaaaaaattacatctctttatagttattagtgtc
ccctgtcaataaagtaaatgattagacttaatgatcattcatccataatt
attttgcacatgtacagttacttttattgatatataataatatcaatatt
tatgagtccctaaatgtcatttgaaccatggcgactacagcaagcagtgg
agacctgctggcaatagctgggtaaaatcgtaaggactttgtctaatatg
gcaggaatactctataaaatgatgaaaggggcaaaaaacaatgtcactta
gtgaaggtaaactgcaatatttgtatgtcacgagcatttcttctataatt
acaggtttagatgttaagatacatggtctggttaagagttcttaaagctt
ctggtaaaatagaactggaatattctttgcacactacaatgtatcaagaa
ctgtctaagcaccttggattcatttttatagacttcaagtaactatctcc
atcaaacacaatctggaacatgtcaaggctacagcgttactgagttcttc
agagtacttaaattctagaagtttttgttctggattggtgctcttttaac
tataatcacagacagcagaaaataagatacattcattcttctaattaaaa
gtttctcattctggaagacaaagaatttttaattccttgaacaatcaaga
caaatccctccacgcagaaatgctgctcagctgggcagtactgatcgcat
agctgccatgagtctttatgagacggtgttgtctcatctgtgagagatat
gtttatctagaggtatggcaaaagtttaaaggatattaggatagatgata
ccagaatatgtaggaagataaatcagaatttactcaatcatcttccctca
cttatctccagagttttccacagaaccataaaggctaatcataaattaaa
aagttggatattatcatgaccatttatatatatgaatgcatgagctaatc
gcatgtccaaaggataaggagaacagtgtactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104197105_104198171
seq2: B6Ng01-160P15.b_99_1161 (reverse)

seq1  CAGGTCCTACAGGGCTTTTAAAACCAAAAATTTAT-CAACATCTGTGCCA  49
      ||||||||||||||| ||||||  | ||||||||| || |||   |||||
seq2  CAGGTCCTACAGGGCCTTTAAA--CCAAAATTTATCCACCATTCTTGCCA  48

seq1  AGATATTTAATCAATCAGAATTTAGGGATAAGGGGATTTCCTGAGGAATA  99
      | |||||||||| ||||||||||||| |||| |||||||||||| |||||
seq2  A-ATATTTAATCCATCAGAATTTAGGAATAA-GGGATTTCCTGAAGAATA  96

seq1  TGTCTTTGTTATACACTCATTCTGCTCCCCTTGGTTGGGGTGTTCACCTG  149
      |||||||||||||| |||| |||||||||||||| ||||||| |||||||
seq2  TGTCTTTGTTATACCCTCA-TCTGCTCCCCTTGG-TGGGGTG-TCACCTG  143

seq1  TGATAGGAGCTTGCCTGGTCTAACATTTATGTCTTAACTTGCCAACCAGA  199
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGATAGGAGCTTGCCTGGTCTACCATTTATGTCTTAACTTGCCAACCAGA  193

seq1  GTGTCAGTTGT-CCACATATCTGTTTCTTTCTGCCAAGTAGAATGTCAGT  248
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGTTGTCCCACATATCTGTTTCTTTCTGCCAAGTAGAATGTCAGT  243

seq1  TCCCAGGAAGGTCTTGGGAACTTAAA-CTTTACTCAAACCCTATTCG-AA  296
      |||||||||||||||||||||||||| |||||||||||||||||||| ||
seq2  TCCCAGGAAGGTCTTGGGAACTTAAACCTTTACTCAAACCCTATTCGAAA  293

seq1  ATGGAAGACTCATTTTAAATAGTTTCTCATATCTCTTATGTTGGGGTTCA  346
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGACTCA-TTTAAATAGTTTCTCATATCTCTTATGTTGGGGTTCA  342

seq1  ACTCACGGGGCAGTTTATAAAAGCAAATACCATGAAAACGCATACACAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACGGGGCAGTTTATAAAAGCAAATACCATGAAAACGCATACACAGA  392

seq1  TGCAGAAATTGCTGCTGGGTGGTTGGGTCAGTTCTACCAAAATTTTTTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAATTGCTGCTGGGTGGTTGGGTCAGTTCTACCAAAATTTTTTGT  442

seq1  GATTAGTTCCCAAGGACACAGAACACAACAAAATATATAATTAACTTAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTTCCCAAGGACACAGAACACAACAAAATATATAATTAACTTAAG  492

seq1  CGTGAGTAAGTTCCCTAGTAAAAGCAAAAATGTAGGAGTTAGTTTTCTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGTAAGTTCCCTAGTAAAAGCAAAAATGTAGGAGTTAGTTTTCTTT  542

seq1  TTTTTTTAAAAAAAAAGATTTATTGTGATTGTGTTACCTTACTCAGGATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAAAAAAAGATTTATTGTGATTGTGTTACCTTACTCAGGATG  592

seq1  ATGCCCTCCAGGACCATCCATTTGCCTAGGAATTTCATAAATTCATTCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTCCAGGACCATCCATTTGCCTAGGAATTTCATAAATTCATTCTT  642

seq1  TTTAATAGCTGAGTAGTACTCCACTGTGTAAATGTACCACATTTTCTGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCCACTGTGTAAATGTACCACATTTTCTGTA  692

seq1  TCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCCTCTGTTGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTATT  742

seq1  ATAAATAAGGCTGCTATGAACATAGTGGAGCAGGTGTCCTTCTTACCCGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCAGGTGTCCTTCTTACCCGT  792

seq1  TGGGACATCTTCTGGATATATGCCCGGGAGAGGTATTGCTGTATCGTCTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATCTTCTGGATATATGCCCGGGAGAGGTATTGCTGTATCGTCTG  842

seq1  GTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGT  892

seq1  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTTTTCCTCTTTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTTTTCCTCTTTC  942

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  992

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGATTGTTTTGTTTGCATTTCCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGATTGTTTTGTTTGCATTTCCC  1042

seq1  TGATTATTAAGGATGTAGAAC  1067
      |||||||||||||||||||||
seq2  TGATTATTAAGGATGTAGAAC  1063

seq1: chr10_104098979_104100193
seq2: B6Ng01-160P15.g_68_1251

seq1  GAATTCAACTCCGGCTGTCTAGGAAGGCAAATGAATGCAGCTTGTTTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCCGGCTGTCTAGGAAGGCAAATGAATGCAGCTTGTTTGGC  50

seq1  TATATACCAATTTAATGCAAAGATCATGCTCCTTATTTATAACCAAGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACCAATTTAATGCAAAGATCATGCTCCTTATTTATAACCAAGCTA  100

seq1  GACTTCCATATTTTAGCCCAGCAGCATTCTAATAAGAAATCTGCATGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCATATTTTAGCCCAGCAGCATTCTAATAAGAAATCTGCATGATC  150

seq1  TTTATCATTCACAGAAGAAAAAATTACATCTCTTTATAGTTATTAGTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATTCACAGAAGAAAAAATTACATCTCTTTATAGTTATTAGTGTC  200

seq1  CCCTGTCAATAAAGTAAATGATTAGACTTAATGATCATTCATCCATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCAATAAAGTAAATGATTAGACTTAATGATCATTCATCCATAATT  250

seq1  ATTTTGCACATGTACAGTTACTTTTATTGATATATAATAATATCAATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCACATGTACAGTTACTTTTATTGATATATAATAATATCAATATT  300

seq1  TATGAGTCCCTAAATGTCATTTGAACCATGGCGACTACAGCAAGCAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTCCCTAAATGTCATTTGAACCATGGCGACTACAGCAAGCAGTGG  350

seq1  AGACCTGCTGGCAATAGCTGGGTAAAATCGTAAGGACTTTGTCTAATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGCTGGCAATAGCTGGGTAAAATCGTAAGGACTTTGTCTAATATG  400

seq1  GCAGGAATACTCTATAAAATGATGAAAGGGGCAAAAAACAATGTCACTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAATACTCTATAAAATGATGAAAGGGGCAAAAAACAATGTCACTTA  450

seq1  GTGAAGGTAAACTGCAATATTTGTATGTCACGAGCATTTCTTCTATAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGTAAACTGCAATATTTGTATGTCACGAGCATTTCTTCTATAATT  500

seq1  ACAGGTTTAGATGTTAAGATACATGGTCTGGTTAAGAGTTCTTAAAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTTAGATGTTAAGATACATGGTCTGGTTAAGAGTTCTTAAAGCTT  550

seq1  CTGGTAAAATAGAACTGGAATATTCTTTGCACACTACAATGTATCAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAAATAGAACTGGAATATTCTTTGCACACTACAATGTATCAAGAA  600

seq1  CTGTCTAAGCACCTTGGATTCATTTTTATAGACTTCAAGTAACTATCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAAGCACCTTGGATTCATTTTTATAGACTTCAAGTAACTATCTCC  650

seq1  ATCAAACACAATCTGGAACATGTCAAGGCTACAGCGTTACTGAGTTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACACAATCTGGAACATGTCAAGGCTACAGCGTTACTGAGTTCTTC  700

seq1  AGAGTACTTAAATTCTAGAAGTTTTTGTTCTGGATTGGTGCTCTTTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACTTAAATTCTAGAAGTTTTTGTTCTGGATTGGTGCTCTTTTAAC  750

seq1  TATAATCACAGACAGCAGAAAATAAGATACATTCATTCTTCTAATTAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCACAGACAGCAGAAAATAAGATACATTCATTCTTCTAATTAAAA  800

seq1  GTTTCTCATTCTGGAAGACAAAGAATTTTTAATTCCTTGAACAATCAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCATTCTGGAAGACAAAGAATTTTTAATTCCTTGAACAATCAAGA  850

seq1  CAAATCCCTCCACGCAGAAATGCTGCTCAGCTGGGCAGTACTGATCGCAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAAATCCCTCCACGCAGAAATGCTGCTCAGCTGGGCAGTACTGATCGC-A  899

seq1  TAGCTGCCAATGAGTCTTTATGAGACGGTGTTGTCTCATCTGTGAAGAGA  950
      |||||||| ||||||||||||||||||||||||||||||||||| |||||
seq2  TAGCTGCC-ATGAGTCTTTATGAGACGGTGTTGTCTCATCTGTG-AGAGA  947

seq1  TAATGTTTATCTTAGAAGGGTATGGCAAAAGTTTAAAAGAATAATTAAGG  1000
      | ||||||||| ||||  ||||||||||||||||||| ||   ||||  |
seq2  T-ATGTTTATC-TAGA--GGTATGGCAAAAGTTTAAAGGA--TATTA--G  989

seq1  AATAGATGATACCAGAAATATGTTAAGAAGATAAAATTCAGGAAATTTAA  1050
       |||||||||||||| |||||| || |||||||||  ||||  ||||| |
seq2  GATAGATGATACCAG-AATATG-TAGGAAGATAAA--TCAG--AATTT-A  1032

seq1  CTCAATCATCTTCACTCACCTTTATCTTCCAGAGGTTTTCACAGAAACCA  1100
      ||||||||||||| |||||  ||||| ||||||| ||| ||||| |||||
seq2  CTCAATCATCTTCCCTCAC--TTATC-TCCAGAGTTTTCCACAG-AACCA  1078

seq1  TTAGAGGCTAATCATAAAATTAAATAAATTTGAATA-TATCATGAACATA  1149
       || ||||||||||| |||||||  ||| ||| ||| |||||||| ||| 
seq2  -TAAAGGCTAATCAT-AAATTAA--AAAGTTGGATATTATCATGACCATT  1124

seq1  TA-ATATATGATTTGCCATTGTAGCCTAATCGCATTGTCAAAAAGAGTAA  1198
      || |||||||| |   |||   || ||||||||| |||| ||| || |||
seq2  TATATATATGAAT--GCAT--GAG-CTAATCGCA-TGTCCAAAGGA-TAA  1167

seq1  GGAGAAACAGT-AACTCT  1215
      |||| ||||||  |||||
seq2  GGAG-AACAGTGTACTCT  1184