BAC Information

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BAC

Clone NameB6Ng01-161F22
Chromosome10 (Build37)
Map Location 91,964,737 - 92,118,213
singlet/doubletdoublet
Overlap geneLOC216229, LOC100041814
Upstream geneLOC100041799, LOC667203
Downstream geneNedd1, Gm872, 4930485B16Rik, EG667314, Pctk2, Elk3, LOC100041854, Lta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161F22.bB6Ng01-161F22.g
ACCDH954499DH954500
length1,1131,014
definitionDH954499|Mus musculus domesticus DNA, BAC clone: B6Ng01-161F22, 5' end.DH954500|Mus musculus domesticus DNA, BAC clone: B6Ng01-161F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,964,737 - 91,965,833)(92,117,185 - 92,118,213)
sequence
gaattcctgtaattccaccttatccccaaccctaccagtccagttctgag
ctctgcttaaagtcttaactcagggctgatgttctcctatcaatcctaca
cataagatggaatatttgcaaagaaggcttaggtagtacccagtgcctgc
tattccaggtaaaagaagagtgaagcctgatgtttattggagccctgggt
tttgtcacgacacaacttaaacaaagggcaaagccacacaaagagtcaca
gtgaacagtcactctccaagtccccagctttgaaaggcacagcagcatct
cagcagcctccacagcagggttcctcagcccaagattcacccaggtattg
gtttattggcattctttctccatcacttaacaataagtagctcttctaaa
aatagtaaataaagacaaatcaaacaagcaataatttctattattctcca
gccaagtgcaaggatggcaaataggacagttctttttggggttgtgatgt
ctgccttaggattcagtgttctaaaagtaaggctgaaagagagtttgcat
tgtctgttgacaatataggtagatagcaggtaaggtaactcacctgccag
atgacatttggtgctatcaagacagaactgcagtggattcaaggaatcct
tagaaagaaaaggacttcggacagagcaaggacaattgaggaattaactc
caggagagtcagctccagcctagaaaaccaagcacaggaaacccaataag
gaaaagaaggacaatcccttccactcccatccccgacccctacacaccac
tacacacccctacacacacacacacacacacacacacacactcacacaca
cacgcacacacacactgccaaaattgactcacttggtcattgctgcattt
ttccggaagcaactgtcttgtctttaggtggctaaagaaaccaatactct
tgaagataaacaaatgtcagttatttaaagtaataaattaacctcaaagc
ttcgaggtaggctcccacatcacttttgtaaagtacagtgggctgaaata
taatggctggaggataaattattggtctccttaataaaattaaagaataa
attcaaaattgat
gaattctgctcatggccagagggagcttggaagagcatctcttcacagta
gagcctccagagaaggatgcctgtcgtgcatctcaagaggagttcagggt
tctgtgcctacagcatgcacaccatgagataataaatatgaacagattta
gctacaaaattggtgatgatttattctgtaacaatggaagtccaatgaat
ctttctaaaatgcattttaaaaaaagtcttgtttgtagtaggtagaaaaa
tgatagagaccccatctttattttgaggagctgaacactgcaaaaattta
gctagtcaagaggaacatttccatttgcccaagagctgccgtttgcaaag
cagtagtgtaaatgaccatctcagatcagatttttgatggagaactctga
cgaaaaggtttttttttttaattgcctctgaaaacactgcctcaaatggg
gtgacagtggctaactccaggatgcctacagaaggtgttagtgggaaggt
tagtcatgggggaaaggtgacccctgagcagatccacacctttctggcta
aaagaagctccctttttcttgggattggtcagtctctcaaatatatgatg
tcctttcctgaaggaaggctaccttccagataaccaggagtttctgtgaa
ggtagccacaggctggtgatcggtcccagggttgtttgtctcactggggc
acagagccttccccctcctcctctcttccatcctctaaggagcttcagtc
gcatcctttgttcatcaaacaagtttttgcctggctctgggacttgcaaa
tctctcatctgcaagagaagacagaacagatggggatgctaacctttatt
ttagcagcagcaatgttcccaaaggcactgaatgtgctagaagctgggct
agaagtcttacaaatgaaaggctagtcatctttcagtaagtctctggagc
tgaggtctaaagggcagcttgagtagagtcttccagtgcctcataagtct
ggaattataggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91964737_91965833
seq2: B6Ng01-161F22.b_42_1154

seq1  GAATTCCTGTAATTCCACCTTATCCCCAACCCTACCAGTCCAGTTCTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTAATTCCACCTTATCCCCAACCCTACCAGTCCAGTTCTGAG  50

seq1  CTCTGCTTAAAGTCTTAACTCAGGGCTGATGTTCTCCTATCAATCCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTAAAGTCTTAACTCAGGGCTGATGTTCTCCTATCAATCCTACA  100

seq1  CATAAGATGGAATATTTGCAAAGAAGGCTTAGGTAGTACCCAGTGCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATGGAATATTTGCAAAGAAGGCTTAGGTAGTACCCAGTGCCTGC  150

seq1  TATTCCAGGTAAAAGAAGAGTGAAGCCTGATGTTTATTGGAGCCCTGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAGGTAAAAGAAGAGTGAAGCCTGATGTTTATTGGAGCCCTGGGT  200

seq1  TTTGTCACGACACAACTTAAACAAAGGGCAAAGCCACACAAAGAGTCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACGACACAACTTAAACAAAGGGCAAAGCCACACAAAGAGTCACA  250

seq1  GTGAACAGTCACTCTCCAAGTCCCCAGCTTTGAAAGGCACAGCAGCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAGTCACTCTCCAAGTCCCCAGCTTTGAAAGGCACAGCAGCATCT  300

seq1  CAGCAGCCTCCACAGCAGGGTTCCTCAGCCCAAGATTCACCCAGGTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCTCCACAGCAGGGTTCCTCAGCCCAAGATTCACCCAGGTATTG  350

seq1  GTTTATTGGCATTCTTTCTCCATCACTTAACAATAAGTAGCTCTTCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGGCATTCTTTCTCCATCACTTAACAATAAGTAGCTCTTCTAAA  400

seq1  AATAGTAAATAAAGACAAATCAAACAAGCAATAATTTCTATTATTCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAAATAAAGACAAATCAAACAAGCAATAATTTCTATTATTCTCCA  450

seq1  GCCAAGTGCAAGGATGGCAAATAGGACAGTTCTTTTTGGGGTTGTGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTGCAAGGATGGCAAATAGGACAGTTCTTTTTGGGGTTGTGATGT  500

seq1  CTGCCTTAGGATTCAGTGTTCTAAAAGTAAGGCTGAAAGAGAGTTTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTAGGATTCAGTGTTCTAAAAGTAAGGCTGAAAGAGAGTTTGCAT  550

seq1  TGTCTGTTGACAATATAGGTAGATAGCAGGTAAGGTAACTCACCTGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTGACAATATAGGTAGATAGCAGGTAAGGTAACTCACCTGCCAG  600

seq1  ATGACATTTGGTGCTATCAAGACAGAACTGCAGTGGATTCAAGGAATCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTTGGTGCTATCAAGACAGAACTGCAGTGGATTCAAGGAATCCT  650

seq1  TAGAAAGAAAAGGACTTCGGACAGAGCAAGGACAATTGAGGAATTAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAAAAGGACTTCGGACAGAGCAAGGACAATTGAGGAATTAACTC  700

seq1  CAGGAGAGTCAGCTCCAGCCTAGAAAACCAAGCACAGGAAACCCAATAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGTCAGCTCCAGCCTAGAAAACCAAGCACAGGAAACCCAATAAG  750

seq1  GAAAAGAAGGACAATCCCTTCCACTCCCATCCCCGACCCCTACACACCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAGGACAATCCCTTCCACTCCCATCCCCGACCCCTACACACCAC  800

seq1  TACACACCCCTACACACACACACACACACACACACACACACACACACACA  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TACACACCCCTACACACACACACACACACACACACACACACTCACACACA  850

seq1  CACACACACACACACTGCCACAA-TGACTCACTTGGTCATTGCTGCATTT  899
      ||| |||||||||||||||| || ||||||||||||||||||||||||||
seq2  CACGCACACACACACTGCCAAAATTGACTCACTTGGTCATTGCTGCATTT  900

seq1  TTCCGGAAGC-ACTGTC-TGTCTATA-GTGGCTAAAGAAACCAATACTC-  945
      |||||||||| |||||| ||||| || |||||||||||||||||||||| 
seq2  TTCCGGAAGCAACTGTCTTGTCTTTAGGTGGCTAAAGAAACCAATACTCT  950

seq1  TGAAGATAAACAAATGTCAGTTATTTAAAGTAATAAATTAA-CTCAAAGC  994
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAAGATAAACAAATGTCAGTTATTTAAAGTAATAAATTAACCTCAAAGC  1000

seq1  -TCGA-GTAAGCT-CCACATCACTTTTGTAGAGTACAGT-GGCTG--ATA  1038
       |||| ||| ||| |||||||||||||||| |||||||| |||||  |||
seq2  TTCGAGGTAGGCTCCCACATCACTTTTGTAAAGTACAGTGGGCTGAAATA  1050

seq1  TAATGGCT-GAGGTATAATTATT-GTCTCTTTAATAAAATTAAAG-ATAA  1085
      |||||||| ||||   ||||||| ||||| ||||||||||||||| ||||
seq2  TAATGGCTGGAGGATAAATTATTGGTCTCCTTAATAAAATTAAAGAATAA  1100

seq1  ATTC-AAATTGAT  1097
      |||| ||||||||
seq2  ATTCAAAATTGAT  1113

seq1: chr10_92117185_92118213
seq2: B6Ng01-161F22.g_66_1078 (reverse)

seq1  AGCCTATATATTCCAGGCTCTATGGAGGCACTGGAAGAACTCTACTCAAA  50
      |||||||| ||||||| || ||| ||||||||||||| ||||||||| ||
seq2  AGCCTATA-ATTCCAGACT-TAT-GAGGCACTGGAAG-ACTCTACTC-AA  45

seq1  GCTGCCCTCTAGGACCTCAGCTCCAGAAGACTTAACTGAAAGGATGACCT  100
      |||||||| || |||||||||||||| |||||| ||||||| ||||| ||
seq2  GCTGCCCTTTA-GACCTCAGCTCCAG-AGACTT-ACTGAAA-GATGA-CT  90

seq1  AGGCCTTTCATCTGTAAGACTTCCTAGCCCAGCTTCTAGCACATACAGTG  150
      | ||||||||| |||||||||| ||||||||||||||||||||| |||||
seq2  A-GCCTTTCATTTGTAAGACTT-CTAGCCCAGCTTCTAGCACATTCAGTG  138

seq1  CCTTTGGGAAACATTGCTGCTGCTTAAAATTAAAGGTTAGCATCCCCATC  200
      |||||||| |||||||||||||||  ||| ||||||||||||||||||||
seq2  CCTTTGGG-AACATTGCTGCTGCT--AAAATAAAGGTTAGCATCCCCATC  185

seq1  TGTTCTGTCTTCTTCTTGCAGATGAGAGATTGCCAAGTCCCAGAGCCAGG  250
      |||||||||||| ||||||||||||||||||  |||||||||||||||||
seq2  TGTTCTGTCTTC-TCTTGCAGATGAGAGATTTGCAAGTCCCAGAGCCAGG  234

seq1  CAAAAACCTTGTTTGATGAACAAAGGATGCGACTGAAGCTCCTTAGAGGA  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAA-CTTGTTTGATGAACAAAGGATGCGACTGAAGCTCCTTAGAGGA  283

seq1  TGGAAGAGAGGAGGAGGGGGAAGGCTCTGTGCCCCAGTGAGACAAACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGAGGAGGAGGGGGAAGGCTCTGTGCCCCAGTGAGACAAACAAC  333

seq1  CCTGGGACCGATCACCAGCCTGTGGCTACCTTCACAGAAACTCCTGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGACCGATCACCAGCCTGTGGCTACCTTCACAGAAACTCCTGGTTA  383

seq1  TCTGGAAGGTAGCCTTCCTTCAGGAAAGGACATCATATATTTGAGAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGGTAGCCTTCCTTCAGGAAAGGACATCATATATTTGAGAGACT  433

seq1  GACCAATCCCAAGAAAAAGGGAGCTTCTTTTAGCCAG-AAGGTGTGGATC  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GACCAATCCCAAGAAAAAGGGAGCTTCTTTTAGCCAGAAAGGTGTGGATC  483

seq1  TGCTCAGGGGTCACCTTTCCCCCATGACTAACCTTCCCACTAACACCTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGGGTCACCTTTCCCCCATGACTAACCTTCCCACTAACACCTTC  533

seq1  TGTAGGCATCCTGGAGTTAGCCACTGTCACCCCATTTGAGGCAGTGTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCATCCTGGAGTTAGCCACTGTCACCCCATTTGAGGCAGTGTTTT  583

seq1  CAGAGGCAATTAAAAAAAAAAACCTTTTCGTCAGAGTTCTCCATCAAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAATTAAAAAAAAAAACCTTTTCGTCAGAGTTCTCCATCAAAAA  633

seq1  TCTGATCTGAGATGGTCATTTACACTACTGCTTTGCAAACGGCAGCTCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCTGAGATGGTCATTTACACTACTGCTTTGCAAACGGCAGCTCTT  683

seq1  GGGCAAATGGAAATGTTCCTCTTGACTAGCTAAATTTTTGCAGTGTTCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAATGGAAATGTTCCTCTTGACTAGCTAAATTTTTGCAGTGTTCAG  733

seq1  CTCCTCAAAATAAAGATGGGGTCTCTATCATTTTTCTACCTACTACAAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAAAATAAAGATGGGGTCTCTATCATTTTTCTACCTACTACAAAC  783

seq1  AAGACTTTTTTTAAAATGCATTTTAGAAAGATTCATTGGACTTCCATTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTTTTTAAAATGCATTTTAGAAAGATTCATTGGACTTCCATTGT  833

seq1  TACAGAATAAATCATCACCAATTTTGTAGCTAAATCTGTTCATATTTATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAATAAATCATCACCAATTTTGTAGCTAAATCTGTTCATATTTATT  883

seq1  ATCTCATGGTGTGCATGCTGTAGGCACAGAACCCTGAACTCCTCTTGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGGTGTGCATGCTGTAGGCACAGAACCCTGAACTCCTCTTGAGA  933

seq1  TGCACGACAGGCATCCTTCTCTGGAGGCTCTACTGTGAAGAGATGCTCTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGACAGGCATCCTTCTCTGGAGGCTCTACTGTGAAGAGATGCTCTT  983

seq1  CCAAGCTCCCTCTGGCCATGAGCAGAATTC  1029
      ||||||||||||||||||||||||||||||
seq2  CCAAGCTCCCTCTGGCCATGAGCAGAATTC  1013