BAC Information

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BAC

Clone NameB6Ng01-161P03
Chromosome10 (Build37)
Map Location 117,809,762 - 117,921,078
singlet/doubletdoublet
Overlap geneLOC668216, Ifng
Upstream geneCpsf6, LOC668146, LOC668149, Kifc5c, Cpm, Mdm2, Slc35e3, Nup107, Rap1b, Mdm1, Il22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213
Downstream geneLOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1, Grip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161P03.bB6Ng01-161P03.g
ACCDH954918DH954919
length1,144898
definitionDH954918|Mus musculus domesticus DNA, BAC clone: B6Ng01-161P03, 5' end.DH954919|Mus musculus domesticus DNA, BAC clone: B6Ng01-161P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,919,922 - 117,921,078)(117,809,762 - 117,810,660)
sequence
gaattctgcagctctatctcttcttctgggaggatgggtaatggtaggtg
ttagatgaacttcctgtgcacacaattgtatctttcagaaaagaattctc
gaaatacctttgggtagctttcagtgggatgagcagtgagttggtatagt
ttagttttcaggaagtgttatacagccactaaatgagaaaaacaaaacac
ctaaccctcccctgcaaagactaaaacaacacagaatagaaggtattgga
tctagaccacactgtcccacacacaagagttccccatgctacagtcactg
gatgaaatttattgaagaaaaggcccattcatcatggttctttaaaattt
caaagtagcgctgtgcttcagaaaaagcctctcccttctctcgtctaaaa
taccaaaattatacaattaccttaaattctactagagagatttatttttg
tggtatctaatatggaaggggcatctgggaatttcctatgaggtttaacc
tacaaacatctgcatgttaacataagatggagtttaccgacgaaaggttg
ttatgtctataacgtatctcccacagagcatcccagcacacatccgcccc
acccgtcccttctttccatgagaatctggaccgctcttcctcattcaacc
gtcccattggactgatgatttaaaacagataaaatagagatgcagtagcg
ttttgatattgtactgtggttagcatatggattagaacactcattcataa
aacatatatctcttagttacataaccttactcctatagtaatacgtcata
tatgtaacagttgcacaaatcataaataataagatgaaaaatcaatgcta
tttaaaaatctgtgagtttgtctgtgtcctaacacacatcttgaacaccc
cctagagcagtggttctcagcccgtgtgttgcgactccttttgtaaatga
tccaaatgatccttttacagggttcacctaaaactgtcagaaattacagg
tatttacatcacgatgcttgaataataaaatacttacagaaaaataacta
cacctcatgcttgcctcagcggtgtctacactgttgaactcagcatgtgt
cgaaaatgtggcgaactccagtgaccgtagccaatgttttctgt
gaattcatttgaataaaaaccactcagagagggacagacaggtattctgt
ggccggctggcagctgagtagtcttgcagttgctaggtgtgttgtccaga
gaggaatatatatgaacagtgcataggggtaagggagttagcctggcaaa
tacattgttacaaagtgaagtggaaatttctggtttctttggaaagtcag
ttgtgtcagatggtgttttgctggggcagacatgtgaaggagtgttttcc
tgaagcggatacagaagagaggatgttctgctaaagcaagcatgtgaaag
gatgggtgatgaaggattcgttgctaaggagacacgcgcgcgcgcacaca
cacacacagacacacacagacacacacagacacacacacactggttcgcc
ttacattgcattcttgaggtccatttgtcaggactccatagagaaaaaca
tactgaaaaacttcttgtaaggttcctgcggcttcttgccgcttctgtgg
aatcaggtgattggcagagtgatgtcagctgagacagacttgtgtgctga
gacaagacccgtggagggcacatgatatttggagggagaatgagtaggac
tcaaagaacagtgacagagccttgcctagctaactttacaatgcttcttg
gtctggagtctttgctgatctttgcttcattgagagatgcatgacaaaga
agaaagggcggtggcctttgctgttgggttaagtacatctccgtgcagtc
ctagctgtcctggaactcactctgtagaccaggctggcctcgaactcaga
aatccgcctgcctctgcctccaagtgctgggattaaaggtgtgcgccatt
agctctagttgtaactttaaaacattttcatgggggctggaagagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_117919922_117921078
seq2: B6Ng01-161P03.b_46_1189 (reverse)

seq1  ACAGAAACACTTGCCTAC-GTCACTGGAGTCGGCTCACTGTTCTCGGACA  49
      |||||||   ||| |||| |||||||||||  || |||  || || ||||
seq2  ACAGAAAACATTGGCTACGGTCACTGGAGTTCGC-CAC-ATTTTC-GACA  47

seq1  CATGCTGAGTTTCCACCAAGTGTAGACACCGCTGAGGCAAAGCATTGAGT  99
      |||||||||||  || | |||||||||||||||||||| ||||||   ||
seq2  CATGCTGAGTT--CAAC-AGTGTAGACACCGCTGAGGC-AAGCATGAGGT  93

seq1  GTAGTTTAATTTTTCTGTAAGTAATTTTATTATTCCAAGGCATCGTGATG  149
      ||||||  |||||||||||||| ||||||||||||  | |||||||||||
seq2  GTAGTT--ATTTTTCTGTAAGT-ATTTTATTATTC--AAGCATCGTGATG  138

seq1  TAAATACCTGTAATTTCTGACAGTTTTAGGTGAACCCTGTAAAAGGATCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACCTGTAATTTCTGACAGTTTTAGGTGAACCCTGTAAAAGGATCA  188

seq1  TTTGGATCATTTAC-AAAGGAGTCGCAACCACACGGGCTGAGAACCACTG  248
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  TTTGGATCATTTACAAAAGGAGTCGCAA-CACACGGGCTGAGAACCACTG  237

seq1  CTCTAGGGGGTGTTCAAGATTGTGTGTTAGGACACAGACAAAACTCACAG  298
      ||||||||||||||||||| ||||||||||||||||||| ||||||||||
seq2  CTCTAGGGGGTGTTCAAGA-TGTGTGTTAGGACACAGAC-AAACTCACAG  285

seq1  ATTTTTAAATAGCATTGATTTTTCATCTTATTATTTATGATTTGTGCAAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAATAGCATTGATTTTTCATCTTATTATTTATGATTTGTGCAAC  335

seq1  TGTTACATATATGACGTATTACTATAGGAGTAAGGTTATGTAACTAAGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATATATGACGTATTACTATAGGAGTAAGGTTATGTAACTAAGAG  385

seq1  ATATATGTTTTATGAATGAGTGTTCTAATCCATATGCTAACCACAGTACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTTTTATGAATGAGTGTTCTAATCCATATGCTAACCACAGTACA  435

seq1  ATATCAAAACGCTACTGCATCTCTATTTTATCTGTTTTAAATCATCAGTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAAACGCTACTGCATCTCTATTTTATCTGTTTTAAATCATCAGTC  485

seq1  CAATGGGACGGTTGAATGAGGAAGAGCGGTCCAGATTCTCATGGAAAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGACGGTTGAATGAGGAAGAGCGGTCCAGATTCTCATGGAAAGAA  535

seq1  GGGACGGGTGGGGCGGATGTGTGCTGGGATGCTCTGTGGGAGATACGTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACGGGTGGGGCGGATGTGTGCTGGGATGCTCTGTGGGAGATACGTTA  585

seq1  TAGACATAACAACCTTTCGTCGGTAAACTCCATCTTATGTTAACATGCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATAACAACCTTTCGTCGGTAAACTCCATCTTATGTTAACATGCAG  635

seq1  ATGTTTGTAGGTTAAACCTCATAGGAAATTCCCAGATGCCCCTTCCATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGTAGGTTAAACCTCATAGGAAATTCCCAGATGCCCCTTCCATAT  685

seq1  TAGATACCACAAAAATAAATCTCTCTAGTAGAATTTAAGGTAATTGTATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATACCACAAAAATAAATCTCTCTAGTAGAATTTAAGGTAATTGTATA  735

seq1  ATTTTGGTATTTTAGACGAGAGAAGGGAGAGGCTTTTTCTGAAGCACAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTATTTTAGACGAGAGAAGGGAGAGGCTTTTTCTGAAGCACAGC  785

seq1  GCTACTTTGAAATTTTAAAGAACCATGATGAATGGGCCTTTTCTTCAATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTGAAATTTTAAAGAACCATGATGAATGGGCCTTTTCTTCAATA  835

seq1  AATTTCATCCAGTGACTGTAGCATGGGGAACTCTTGTGTGTGGGACAGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCATCCAGTGACTGTAGCATGGGGAACTCTTGTGTGTGGGACAGTG  885

seq1  TGGTCTAGATCCAATACCTTCTATTCTGTGTTGTTTTAGTCTTTGCAGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTAGATCCAATACCTTCTATTCTGTGTTGTTTTAGTCTTTGCAGGG  935

seq1  GAGGGTTAGGTGTTTTGTTTTTCTCATTTAGTGGCTGTATAACACTTCCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTAGGTGTTTTGTTTTTCTCATTTAGTGGCTGTATAACACTTCCT  985

seq1  GAAAACTAAACTATACCAACTCACTGCTCATCCCACTGAAAGCTACCCAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAAACTATACCAACTCACTGCTCATCCCACTGAAAGCTACCCAA  1035

seq1  AGGTATTTCGAGAATTCTTTTCTGAAAGATACAATTGTGTGCACAGGAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTTCGAGAATTCTTTTCTGAAAGATACAATTGTGTGCACAGGAAG  1085

seq1  TTCATCTAACACCTACCATTACCCATCCTCCCAGAAGAAGAGATAGAGCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTAACACCTACCATTACCCATCCTCCCAGAAGAAGAGATAGAGCT  1135

seq1  GCAGAATTC  1157
      |||||||||
seq2  GCAGAATTC  1144

seq1: chr10_117809762_117810660
seq2: B6Ng01-161P03.g_66_963

seq1  GAATTCATTTGAATAAAAACCACTCAGAGAGGGACAGACAGGTATTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGAATAAAAACCACTCAGAGAGGGACAGACAGGTATTCTGT  50

seq1  GGCCGGCTGGCAGCTGAGTAGTCTTGCAGTTGCTAGGTGTGTTGTCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGGCTGGCAGCTGAGTAGTCTTGCAGTTGCTAGGTGTGTTGTCCAGA  100

seq1  GAGGAATATATATGAACAGTGCATAGGGGTAAGGGAGTTAGCCTGGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATATATATGAACAGTGCATAGGGGTAAGGGAGTTAGCCTGGCAAA  150

seq1  TACATTGTTACAAAGTGAAGTGGAAATTTCTGGTTTCTTTGGAAAGTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGTTACAAAGTGAAGTGGAAATTTCTGGTTTCTTTGGAAAGTCAG  200

seq1  TTGTGTCAGATGGTGTTTTGCTGGGGCAGACATGTGAAGGAGTGTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCAGATGGTGTTTTGCTGGGGCAGACATGTGAAGGAGTGTTTTCC  250

seq1  TGAAGCGGATACAGAAGAGAGGATGTTCTGCTAAAGCAAGCATGTGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCGGATACAGAAGAGAGGATGTTCTGCTAAAGCAAGCATGTGAAAG  300

seq1  GATGGGTGATGAAGGATTCGTTGCTAAGGAGACACGCGCGCGCGCACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTGATGAAGGATTCGTTGCTAAGGAGACACGCGCGCGCGCACACA  350

seq1  CACACACAGACACACACAGACACACACAGACACACACACACTGGTTCGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAGACACACACAGACACACACAGACACACACACACTGGTTCGCC  400

seq1  TTACATTGCATTCTTGAGGTCCATTTGTCAGGACTCCATAGAGAAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTGCATTCTTGAGGTCCATTTGTCAGGACTCCATAGAGAAAAACA  450

seq1  TACTGAAAAACTTCTTGTAAGGTTCCTGCGGCTTCTTGCCGCTTCTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAAAACTTCTTGTAAGGTTCCTGCGGCTTCTTGCCGCTTCTGTGG  500

seq1  AATCAGGTGATTGGCAGAGTGATGTCAGCTGAGACAGACTTGTGTGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGTGATTGGCAGAGTGATGTCAGCTGAGACAGACTTGTGTGCTGA  550

seq1  GACAAGACCCGTGGAGGGCACATGATATTTGGAGGGAGAATGAGTAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGACCCGTGGAGGGCACATGATATTTGGAGGGAGAATGAGTAGGAC  600

seq1  TCAAAGAACAGTGACAGAGCCTTGCCTAGCTAACTTTACAATGCTTCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAACAGTGACAGAGCCTTGCCTAGCTAACTTTACAATGCTTCTTG  650

seq1  GTCTGGAGTCTTTGCTGATCTTTGCTTCATTGAGAGATGCATGACAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAGTCTTTGCTGATCTTTGCTTCATTGAGAGATGCATGACAAAGA  700

seq1  AGAAAGGGCGGTGGCCTTTGCTGTTGGGTTAAGTACATCTCCGTGCAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGCGGTGGCCTTTGCTGTTGGGTTAAGTACATCTCCGTGCAGTC  750

seq1  CTAGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGA  800

seq1  AATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCGCCAT  850
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATCCGCCTGCCTCTGCCT-CCAAGTGCTGGGATTAAAGGTGTGCGCCAT  849

seq1  TAGCTCTAGTTGTAACTTTAAAAACATTTTCATGGGGGCTGG-AGAGATA  899
      ||||||||||||||||||| |||||||||||||||||||||| |||||||
seq2  TAGCTCTAGTTGTAACTTT-AAAACATTTTCATGGGGGCTGGAAGAGATA  898