BAC Information

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BAC

Clone NameB6Ng01-162A13
Chromosome10 (Build37)
Map Location 67,421,134 - 67,610,955
singlet/doubletdoublet
Overlap genePlekhk1, Arid5b
Upstream geneReep3, Jmjd1c, Nrbf2, Egr2, Gm237, LOC100040081, LOC100039618, Zfp365
Downstream geneLOC100040136, 1700040L02Rik, EG665342, Tmem26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162A13.bB6Ng01-162A13.g
ACCDH954981DH954982
length4491,151
definitionDH954981|Mus musculus domesticus DNA, BAC clone: B6Ng01-162A13, 5' end.DH954982|Mus musculus domesticus DNA, BAC clone: B6Ng01-162A13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,610,501 - 67,610,955)(67,421,134 - 67,422,285)
sequence
cttttggaattttctttttagtgagaggacacagaagaaagagcatgttc
agctcgtaccacagcacacacagaaataagacagcagtcatgtttggcta
aagaaggcacagctgtttaattttatagtagagttactttaaggactttg
tcaattcaaagacgaaaaccaaacaactgttgctacaaaaactggagttg
aggccaagtcaagataaatctgttcctaaaaccatcttagaattacagaa
catttgggttcatgctgggcggggaagcagctctatttaaaaagacttgg
agggccggtgcttggtgctttggctggaaatcggaggacagaggccttgc
tcttttgtgtcccgggctctgcagttttggatccctcagctcttttagcc
gctcagggtttgttttaattccaagtttgtttgctttgggggggggggg
gaattcaactccaatttgtaatccaaacaccaatctttaaggaattcaga
gtatgggtggtttggggacaaagtccaaaagcattgcacctgagctatca
accacagatcaaatgatctggtttttttcttcctgtcgaaagacatatgc
ccactgaaatgcacgcaccatatttgaccctgactcacatgaagtataaa
atgatgtgccatgagtactgtgaactcactcacactggtgataacacagt
acaattagagccatggcattgagtttatgttctttaaaaagcaatgcatt
tgtctatcagcgagtcttctgaaacacttcagaagcaagaggatgctgtc
tgaaacatacttctagggctggaggcagggaggaactcagataaaggaag
atcagcttgagtgaatagtattgaaatcacctgacaggtcagagaattta
ataaattattctctttagatcattgtagtcacaataacattacaaaacat
ttacatgggcctttctaattggtttaggctctaggtactgtccttacgtt
aacagcttaacttattaagaacaagtgatttaagttattaattactaagt
taattgtacaaatacaccacaaatgcattcactttcatattagttggttg
ggtctattgatcaacctacaacactactactaaaccactctcttcttcta
ttaaaaggatagagcaaaagctattctatccacgttggtgtccacaaata
tttcactgaattttcaccttttaaatatttcccaagtgtttttgaaactg
tcatttcaaaacccaacttggagtcagcctcttactgcaatgccagctct
caggaagtggaaactgaaggttatagattcaaacaaactaacaaaccaat
ccaaccctgattggagagctgtctgttgccatacgtgttaggtagcctga
aagtcccaagatttaaggaatcaggttacctcctgtaatctttgttgaat
gaattaaggaaaagacatttctggcattgcaagactttacttgaaaaaac
tgtagtctccctttcctatgaattttcaaatctatcctgatacctaatgt
ttcgaattgtgtgtgttccattggtttatgacgtgccttaaacacagaat
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_67610501_67610955
seq2: B6Ng01-162A13.b_46_500 (reverse)

seq1  CCCCCCCCCCCCAAAGCAAACAAACTTGGAATTAAAACAAACCCTGAGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCAAAGCAAACAAACTTGGAATTAAAACAAACCCTGAGCG  50

seq1  GCTAAAAGAGCTGAGGGATCCAAAACTGCAGAGCCCGGGACACAAAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAAGAGCTGAGGGATCCAAAACTGCAGAGCCCGGGACACAAAAGAG  100

seq1  CAAGGCCTCTGTCCTCCGATTTCCAGCCAAAGCACCAAGCACCGGCCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTCTGTCCTCCGATTTCCAGCCAAAGCACCAAGCACCGGCCCTC  150

seq1  CAAGTCTTTTTAAATAGAGCTGCTTCCCCGCCCAGCATGAACCCAAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTTTTTAAATAGAGCTGCTTCCCCGCCCAGCATGAACCCAAATGT  200

seq1  TCTGTAATTCTAAGATGGTTTTAGGAACAGATTTATCTTGACTTGGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATTCTAAGATGGTTTTAGGAACAGATTTATCTTGACTTGGCCTC  250

seq1  AACTCCAGTTTTTGTAGCAACAGTTGTTTGGTTTTCGTCTTTGAATTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAGTTTTTGTAGCAACAGTTGTTTGGTTTTCGTCTTTGAATTGAC  300

seq1  AAAGTCCTTAAAGTAACTCTACTATAAAATTAAACAGCTGTGCCTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTTAAAGTAACTCTACTATAAAATTAAACAGCTGTGCCTTCTTT  350

seq1  AGCCAAACATGACTGCTGTCTTATTTCTGTGTGTGCTGTGGTACGAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAACATGACTGCTGTCTTATTTCTGTGTGTGCTGTGGTACGAGCTG  400

seq1  AACATGCTCTTTCTTCTGTGTCCTCTCACTAAAAAGAAAATTCCAAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCTCTTTCTTCTGTGTCCTCTCACTAAAAAGAAAATTCCAAAAGG  450

seq1  AATTC  455
      |||||
seq2  AATTC  455

seq1: chr10_67421134_67422285
seq2: B6Ng01-162A13.g_69_1219

seq1  GAATTCAACTCCAATTTGTAATCCAAACACCAATCTTTAAGGAATTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCCAATTTGTAATCCAAACACCAATCTTTAAGGAATTCAGA  50

seq1  GTATGGGTGGTTTGGGGACAAAGTCCAAAAGCATTGCACCTGAGCTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGTGGTTTGGGGACAAAGTCCAAAAGCATTGCACCTGAGCTATCA  100

seq1  ACCACAGATCAAATGATCTGGTTTTTTTCTTCCTGTCGAAAGACATATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGATCAAATGATCTGGTTTTTTTCTTCCTGTCGAAAGACATATGC  150

seq1  CCACTGAAATGCACGCACCATATTTGACCCTGACTCACATGAAGTATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAATGCACGCACCATATTTGACCCTGACTCACATGAAGTATAAA  200

seq1  ATGATGTGCCATGAGTACTGTGAACTCACTCACACTGGTGATAACACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTGCCATGAGTACTGTGAACTCACTCACACTGGTGATAACACAGT  250

seq1  ACAATTAGAGCCATGGCATTGAGTTTATGTTCTTTAAAAAGCAATGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTAGAGCCATGGCATTGAGTTTATGTTCTTTAAAAAGCAATGCATT  300

seq1  TGTCTATCAGCGAGTCTTCTGAAACACTTCAGAAGCAAGAGGATGCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATCAGCGAGTCTTCTGAAACACTTCAGAAGCAAGAGGATGCTGTC  350

seq1  TGAAACATACTTCTAGGGCTGGAGGCAGGGAGGAACTCAGATAAAGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATACTTCTAGGGCTGGAGGCAGGGAGGAACTCAGATAAAGGAAG  400

seq1  ATCAGCTTGAGTGAATAGTATTGAAATCACCTGACAGGTCAGAGAATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTTGAGTGAATAGTATTGAAATCACCTGACAGGTCAGAGAATTTA  450

seq1  ATAAATTATTCTCTTTAGATCATTGTAGTCACAATAACATTACAAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTATTCTCTTTAGATCATTGTAGTCACAATAACATTACAAAACAT  500

seq1  TTACATGGGCCTTTCTAATTGGTTTAGGCTCTAGGTACTGTCCTTACGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGGCCTTTCTAATTGGTTTAGGCTCTAGGTACTGTCCTTACGTT  550

seq1  AACAGCTTAACTTATTAAGAACAAGTGATTTAAGTTATTAATTACTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTTAACTTATTAAGAACAAGTGATTTAAGTTATTAATTACTAAGT  600

seq1  TAATTGTACAAATACACCACAAATGCATTCACTTTCATATTAGTTGGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTACAAATACACCACAAATGCATTCACTTTCATATTAGTTGGTTG  650

seq1  GGTCTATTGATCAACCTACAACACTACTACTAAACCACTCTCTTCTTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATTGATCAACCTACAACACTACTACTAAACCACTCTCTTCTTCTA  700

seq1  TTAAAAGGATAGAGCAAAAGCTATTCTATCCACGTTGGTGTCCACAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGATAGAGCAAAAGCTATTCTATCCACGTTGGTGTCCACAAATA  750

seq1  TTTCACTGAATTTTCACCTTTTAAATATTTCCCAAGTGTTTTTGAAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGAATTTTCACCTTTTAAATATTTCCCAAGTGTTTTTGAAACTG  800

seq1  TCATTTCAAAACCCAACTTGGAGTCAGCCTCTTACTGCAATGCCAGCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCAAAACCCAACTTGGAGTCAGCCTCTTACTGCAATGCCAGCTCT  850

seq1  CAGGAAGTGGAAACTGAAGGATTATAGATTCAAACAAACTAACAAACCAA  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAGGAAGTGGAAACTGAAGG-TTATAGATTCAAACAAACTAACAAACCAA  899

seq1  -CCAACCCTGATTGGAGAGCTGTCTGTTGCCATACGTG-TAGGTAGCCTG  948
       ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCCAACCCTGATTGGAGAGCTGTCTGTTGCCATACGTGTTAGGTAGCCTG  949

seq1  AAAGTCCCAAGA-TTAAGGAATCAGGTTACCT-CTGTAATCTTTGTTGAA  996
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  AAAGTCCCAAGATTTAAGGAATCAGGTTACCTCCTGTAATCTTTGTTGAA  999

seq1  TGAAATAAAGAAAAGAACATTCTGGCATTGCAAGACCTTTACTTGAAAAA  1046
      |||| ||| |||||||   |||||||||||||||| ||||||||| ||||
seq2  TGAATTAAGGAAAAGACATTTCTGGCATTGCAAGA-CTTTACTTG-AAAA  1047

seq1  AACTGTAGTCTCCTTTTCTAATGAATTTTCAAATCTAATCTGATACCTAA  1096
      ||||||||||||| ||||  |||||||||||||||||  |||||||||||
seq2  AACTGTAGTCTCCCTTTCCTATGAATTTTCAAATCTATCCTGATACCTAA  1097

seq1  TGTTTCAGAAATGTGTGTGTTTCAATTGTTTTATGAC-TGCCTTTAAAAC  1145
      |||||| ||| |||||||| ||| |||| |||||||| |||| |||||  
seq2  TGTTTC-GAATTGTGTGTG-TTCCATTGGTTTATGACGTGCC-TTAAACA  1144

seq1  CAGAATG  1152
      |||||||
seq2  CAGAATG  1151