BAC Information

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BAC

Clone NameB6Ng01-162E14
Chromosome6 (Build37)10 (Build37)
Map Location 18,835,452 - 18,835,9689,634,583 - 9,635,639
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162E14.bB6Ng01-162E14.g
ACCDH955163DH955164
length9511,055
definitionDH955163|Mus musculus domesticus DNA, BAC clone: B6Ng01-162E14, 5' end.DH955164|Mus musculus domesticus DNA, BAC clone: B6Ng01-162E14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(9,634,583 - 9,635,639)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccaaaggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatatttatatattt
g
gaattctttattctgtaccacagtgtttgtgagccgtccaagtccagact
atagagctaactgtagcaaacatgtttccctcccgctttaagtcccagtc
cctgctgcccttcagagttgttttcctcatcccccctacccccccccacg
cccaccagaggccttttccctgtacacccttctccttccgaatgagctct
gatctggacctaaaaggctcatctccacctgccaggttgttttctcctca
ttgactgtctttgattaggaaatcaagactgttgtaaagtgtattctttt
tttttctttcatttattattggatattttctttatttatatttcatatgt
tatccccgtttccactccccgagccccctataccatcttctgcttctatg
agggtgactctcccacccccccatctcccccacctcccacctccgcagcc
tcgaattcccctacactgggcatcgagccttaacagggttaagggcctct
cctcccattgatgcctgacaaggacatcctctgctacatatgcggctgga
gccatgggtccctccatgtgtactgcttggttggtggtttattccatggg
aactctggggttactggttggttgatattattgttcttcctatggggttg
caaaccccttcagttaactcctccattgaggacctcattggggaccctgt
gctcaatccaatggttggcttcgagcatcaaaccgctgtatttgttgggc
tctggcagaaagcctcttaggagacagctatatcaggctcccgtcagcat
ccacttcttgggcattcacaatagtgtctgggtttgatgactgtgtattg
aaatgatccccagttggtgcagtgtagagtatatcttaaactgcatttgc
atacatagatcaggaattaaattttacatactaattatgtccaggttctc
tatattcaaagcactaaatgatttctgaaaactttaatcaacgtttgtta
ttttgttacttgagtgagtgacagtgtgataaaatttatataaggtggac
ctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-162E14.b_50_567 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      |||||||||||| ||||||||||||||||||||||||||| |||||||||
seq2  ACCCACACACCTTTGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      || ||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||| |||||||||||||||||||| |||| ||||||||||||
seq2  AGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr10_9634583_9635639
seq2: B6Ng01-162E14.g_66_1120

seq1  GAATTCTTTATTCTGTACCACAGTGTTTGTGAGCCGTCCAAGTCCAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATTCTGTACCACAGTGTTTGTGAGCCGTCCAAGTCCAGACT  50

seq1  ATAGAGCTAACTGTAGCAAACATGTTTCCCTCCCGCTTTAAGTCCCAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCTAACTGTAGCAAACATGTTTCCCTCCCGCTTTAAGTCCCAGTC  100

seq1  CCTGCTGCCCTTCAGAGTTGTTTTCCTCATCCCCCCTACCCCCCCCCACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGCCCTTCAGAGTTGTTTTCCTCATCCCCCCTACCCCCCCCCACG  150

seq1  CCCACCAGAGGCCTTTTCCCTGTACACCCTTCTCCTTCCGAATGAGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAGAGGCCTTTTCCCTGTACACCCTTCTCCTTCCGAATGAGCTCT  200

seq1  GATCTGGACCTAAAAGGCTCATCTCCACCTGCCAGGTTGTTTTCTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGACCTAAAAGGCTCATCTCCACCTGCCAGGTTGTTTTCTCCTCA  250

seq1  TTGACTGTCTTTGATTAGGAAATCAAGACTGTTGTAAAGTGTATTCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGTCTTTGATTAGGAAATCAAGACTGTTGTAAAGTGTATTCTTTT  300

seq1  TTTTTCTTTCATTTATTATTGGATATTTTCTTTATTTATATTTCATATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTCATTTATTATTGGATATTTTCTTTATTTATATTTCATATGT  350

seq1  TATCCCCGTTTCCACTCCCCGAGCCCCCTATACCATCTTCTGCTTCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCGTTTCCACTCCCCGAGCCCCCTATACCATCTTCTGCTTCTATG  400

seq1  AGGGTGACTCTCCCACCCCCCCATCTCCCCCACCTCCCACCTCCGCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGACTCTCCCACCCCCCCATCTCCCCCACCTCCCACCTCCGCAGCC  450

seq1  TCGAATTCCCCTACACTGGGCATCGAGCCTTAACAGGGTTAAGGGCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATTCCCCTACACTGGGCATCGAGCCTTAACAGGGTTAAGGGCCTCT  500

seq1  CCTCCCATTGATGCCTGACAAGGACATCCTCTGCTACATATGCGGCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCATTGATGCCTGACAAGGACATCCTCTGCTACATATGCGGCTGGA  550

seq1  GCCATGGGTCCCTCCATGTGTACTGCTTGGTTGGTGGTTTATTCCATGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGGTCCCTCCATGTGTACTGCTTGGTTGGTGGTTTATTCCATGGG  600

seq1  AACTCTGGGGTTACTGGTTGGTTGATATTATTGTTCTTCCTATGGGGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGGGTTACTGGTTGGTTGATATTATTGTTCTTCCTATGGGGTTG  650

seq1  CAAACCCCTTCAGTTAACTCCTCCATTGAGGACCTCATTGGGGACCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCCTTCAGTTAACTCCTCCATTGAGGACCTCATTGGGGACCCTGT  700

seq1  GCTCAATCCAATGGTTGGCTTCGAGCATCAAACCGCTGTATTTGTTGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAATCCAATGGTTGGCTTCGAGCATCAAACCGCTGTATTTGTTGGGC  750

seq1  TCTGGCAGAAAGCCTCTTAGGAGACAGCTATATCAGGCTCCCGTCAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGAAAGCCTCTTAGGAGACAGCTATATCAGGCTCCCGTCAGCAT  800

seq1  CCACTTCTT-GGCATTCACAATAGTGTCTGGGTTTGATGACTGTGTATGG  849
      ||||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  CCACTTCTTGGGCATTCACAATAGTGTCTGGGTTTGATGACTGTGTATTG  850

seq1  AATGGATCCCCAGGTGGGGCAGTGTAGAGTATATTCTTAAACTGCATTTG  899
      ||  ||||||||| ||| ||||||||||||||| ||||||||||||||||
seq2  AAATGATCCCCAGTTGGTGCAGTGTAGAGTATA-TCTTAAACTGCATTTG  899

seq1  CATACATAGGATCAGGAATTAAATTTTACATACTAATTATGTCCAGG-TC  948
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  CATACATA-GATCAGGAATTAAATTTTACATACTAATTATGTCCAGGTTC  948

seq1  TCTATATTCAAAGCACTAAATGATTTCTGAAAAACTTTATCAACGTTTGG  998
      |||||||||||||||||||||||||||||||||  || ||||||||||| 
seq2  TCTATATTCAAAGCACTAAATGATTTCTGAAAACTTTAATCAACGTTTGT  998

seq1  TAATTCTGTACTTGAGTGAGTGACAGTGTGATAAAATTAATATAAAGGTT  1048
      || ||   |||||||||||||||||||||||||||||| ||||||  | |
seq2  TATTTTGTTACTTGAGTGAGTGACAGTGTGATAAAATTTATATAA--GGT  1046

seq1  GGACCTGGA  1057
      |||||||||
seq2  GGACCTGGA  1055