BAC Information

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BAC

Clone NameB6Ng01-162O16
Chromosome10 (Build37)
Map Location 109,507,281 - 109,507,600
singlet/doubletsinglet
Overlap genenone
Upstream geneNav3, LOC100042497
Downstream geneLOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162O16.bB6Ng01-162O16.g
ACCDH955632DH955633
length1,2141,057
definitionDH955632|Mus musculus domesticus DNA, BAC clone: B6Ng01-162O16, 5' end.DH955633|Mus musculus domesticus DNA, BAC clone: B6Ng01-162O16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatttttaatagggttatttgattt
tctggagtccagcttcttgagttctttatatatattggatactagtcccc
tatcagatttaatattggtaaagatcctttcccaatccattggtggcctt
tttgccttattgacagtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcaattcttgatcttacagcacaaaccattgctgttc
tgtttagaaaatttccccctgtgcccatatcttcgaggcttttccctact
ttctcctctattaatttcagtgcctctggtcttatgtggaggtctttgat
ccacttagacttgagctttgtacaaggagataagaatggatcaattctaa
ttcttctacatgataactgtctattgtgccagcaccattcgttgataatg
ctgtttttttttttttttcccccactggatggttttagctccctggtcaa
agatcaagggaccataggtgtgtggattcatttctgggtcttcaatttga
ttccattgatctacctgtctgtcactgtaccattaccatgcagttttttt
cacaattgctctgtagtacagattaatgtcaggcatagtgattccaccag
aggttcttttattgttgagaagagtttttgctatcctaggttttttattt
ttccagatgaatttgcaaattgccctttctatctcagtgaagaattgagt
tggaattttgatggggattgcattgaatctgtagattgcttttggcagga
tagccatttttactatgttaatcctgccgatccatgagcatgggagatct
ttccatcttctgagatcttcttcaatttcttttcttcagagacttgaagt
ttttatcatacagatctttcacttccttagttagagtcacaccaaggtat
tttatatttatttgtgactacagtgaagggtgttctttcctttatttgtt
ctcagctgtttatccttgtttagagaaagccactatttattgagttagtt
tatttccagctacttcactgatgctgtttactagtttagaagtcttctgg
tggatttttgggggcactaatatatactacaatctctgctaatggaattg
gccactcctcgatggtcctcgtgtagtccttgtgtaatggcctcggcaga
tacacttctacaga
gaattctcatctgaggaataacaaatggctgagaagcacctgaaaaaatg
tttagcatccttaatcatcacggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgagaatgtagagaaagaggaacactcttccattgttggtg
ggattgtaagcttgtacaaccactctggaaatcagtctggcggttcctca
gacaactggacatagtactactggaggatcctgcaatacctctctctcct
gggcatatatccagaagatgtcccaaccggtaagaaggacacatgctcca
ccatgttcatagcagccttatttataatagccagaagctggaaagaaccc
agatgtccctcaacagaggaatggatacagaaaatgtggtacatttacac
aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag
gcaaatggatggacctggagggtatcatcctgagtgaggtaacccaatca
caaaagaactcacatgatatgtactcactgataagtggacattagcccag
aaacttagaatacccaatatacaagatacaatttgtaaaacacatgaaac
tcaagaagaacaaagaccaaagtgtggacactttgccccttcttagaatt
gggaacaaaacacccatggaaggagttactgagacaaagtttggagctga
gatgaaaggatggaccatctagagactgccataccccgggatccatccca
caatcagcctccaaatgctgacaccattgcatacactaacaagatattgc
tgaaaggacccagatagagctgtctcttgtgaggctatgccggggcctag
caaacacagaagtggatgctcacagtcagctattggatggatcacagggt
cccctgtgagctagggaaattacccaagagctaaagggtctgcaacccta
tagtggaacacaatatgaactaaccagtacccccagagcttggtttttct
agctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_109507281_109507600
seq2: B6Ng01-162O16.g_815_1126 (reverse)

seq1  TGCAGCTAGAGACA-CGAGCTCTGGGGGGTACTGATTATTTCATATTTTT  49
      |||||||||| | | | |||||| |||||||||| ||| |||||| || |
seq2  TGCAGCTAGAAAAACCAAGCTCT-GGGGGTACTGGTTAGTTCATA-TTGT  48

seq1  GTTCCACCTATAGGGGCGCAGATCTCTTTAGCTCCTTGGGTACTTTCTCT  99
      |||||| ||||||||  ||||| | |||||||| |||||||| |||| ||
seq2  GTTCCA-CTATAGGGTTGCAGA-CCCTTTAGCT-CTTGGGTAATTTCCCT  95

seq1  AGCTCCTCCGTTGGAGGCTCTGTGATCCATCCAATAGCTGACTGTGAGCC  149
      ||||    |   || | | |||||||||||||||||||||||||||||| 
seq2  AGCT----CACAGGGGACCCTGTGATCCATCCAATAGCTGACTGTGAGCA  141

seq1  TCCACTTCTGTGTTTGCTAGGCCCTGGCATAGCCTAACAAGAGACAGCTA  199
      |||||||||||||||||||||||| |||||||||| ||||||||||||| 
seq2  TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGCTC  191

seq1  TATCAGGGTCGTTTCAGCAATATCTTGCTAGTGTATGCAATGGTGTCAGA  249
      |||| ||||| |||||||||||||||| ||||||||||||||||||||| 
seq2  TATCTGGGTCCTTTCAGCAATATCTTGTTAGTGTATGCAATGGTGTCAGC  241

seq1  GTTTGGAGGCTGATTATGGGATGGATCCCCAGGTATGGCAGTCTCTAGAT  299
       |||||||||||||| |||||||||||||  |||||||||||||||||||
seq2  ATTTGGAGGCTGATTGTGGGATGGATCCCGGGGTATGGCAGTCTCTAGAT  291

seq1  GATCCATCCTTTCATTTCAGC  320
      | ||||||||||||| |||||
seq2  GGTCCATCCTTTCATCTCAGC  312