BAC Information

Click to search

BAC

Clone NameB6Ng01-162P24
Chromosome10 (Build37)
Map Location 77,555,862 - 77,555,960
singlet/doubletsinglet
Overlap genenone
Upstream geneCol18a1, LOC665762, Pofut2, Adarb1, 1810008A18Rik, Itgb2, Pttg1ip, Sumo3, Ube2g2, LOC674243, LOC670895, Krtap12-1, A030009A09Rik, LOC100041250, LOC100041261, LOC634517, LOC100041281, LOC634504, LOC675294, LOC670880, LOC100040299, LOC675238, C330046G03Rik, EG544710, LOC100041351, 1700009J07Rik, Lrrc3, Trpm2, 1810043G02Rik, Pfkl, Aire, Dnmt3l, Icosl
Downstream geneD10Jhu81e, Pwp2, Tmem1, Agpat3, LOC100041500, Rrp1, Cstb, Pdxk, EG665862, Olfr1358, LOC546482, Ilvbl, Syde1, Olfr1357, LOC665890, Casp14, Ccdc105, Slc1a6, Olfr1356, GA_x5J8B7W4DUT-12263-11330, GA_x5J8B7TPDN2-1058-1265, Olfr233-ps1, Olfr8, GA_x5J8B7TNKDU-1250-1574, Olfr1353, Olfr1352, Olfr1351, Olfr57, 2610008E11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162P24.bB6Ng01-162P24.g
ACCDH955695DH955696
length9421,175
definitionDH955695|Mus musculus domesticus DNA, BAC clone: B6Ng01-162P24, 5' end.DH955696|Mus musculus domesticus DNA, BAC clone: B6Ng01-162P24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgaatctgcacataagacactgaggggctctgccctcaattgt
ttttgattggcaaataaagttgttggcatccaatgactgggcaaagagac
ttaggagggactttaggaagggggccaagggagtaagaaggagttagaac
caccatgccaggaaagtagtaaggaccaagcctgagagatgtggaagaga
gagcatagctatcatgtaagtgccagctggggaagaatggccccaggaga
cccccctattgagtctgaggcaggaaaaatggaatatagattatagtatg
taataactcaggaatatcagaagggaggtgttagccatatggagttttag
gagtggtccaaagattgagctgtttaaggcatgttaaaatataaggctgc
atgtatgtgtctttcatttgagaactcagaacactggagcaggtagcaag
gaattcactgccttggctgaatcgatttgagcaggattaattgacaacta
cacccgggaattttgaatttggagtgagtgcattttgcattttgatatgg
caagaagcctattgagaccagggagtgaaacatggaacaatgaatgagaa
tggcctctatcggcttgtatttttgaatcttcgatccccagttagtggaa
tcattcaggaggaattagggggtgtggctttttggagttgctttggcttt
gttggagatgtgtcactgggagtgggctttgaggtttcaaaagtccacac
cattcccacactctcttataaagaaagcagttaattggaggcttgcttag
agttccaaaggattaatccattaccatcatagtgtgaagtaaaatggcaa
acaggcaggcatggcaatgggattggagctgagagctcacgtatgatctc
caagttacaggtaaagacagccagaatgagagagagagagac
gaattctatgtttagctctatcccccatttttaattgggtaatttagttt
gctgatgtctaatttctagagttcttaatatattttggatattagtcttc
cgtcagatgtaaggtcgatgaagatcttttcccattttgtcagctgatat
tttgtcctattaacagtgtccttaggcttgtcaaagctgctcagttccat
agattcccatttattaagtgttgatcttagtgcctgagcaactggtgatc
tgttcaggaacttgtctcctgggacagtgcattctagatagtcccccaat
ttctcttctattggatttaatgtatccagttttatgttgagttctttgat
gcacttggacttgagttttgtgcagggtgatagatataggtctatttcca
ttcttctacatgcagatgtacagttagataagcaccatttattgaagata
ctctcccttttctttgtttttttttttttttttttggcttctttatcaaa
tatcaagtgttagtaggtttgtatgtttacttttgggttttgatcagatt
ccattgatcaacatgtctgttttcatgtgaatactatgtgggttttgtta
ttattgctctgtaagacaccttgattcagggatgatgatagcactaggtt
ttttaattgtacaggattgttttatctatcttgagttttgtttttccatg
tgaaattgaaaatttttcttacaaggtctataaaaagtgattttggaatt
ttgaagggaatggatttgaattattgtagatttgctttttagtaagaagg
ctattttttctatattaatttctactgattccatgagcaggggagattct
ttctatccttctgggtatcttccctcaatttcttttctcagagactttaa
gtttctgtcatacatatctctcattttgtttgggattgctaagagtatgc
attaatcagaatcatcaccaaatatgtatctagtactaaaatccaaatat
tgataactattggaaaataatattaaaggaaattccacttttaacaccaa
ccaaatcttgattggtgtagcaaatttttgtgattcaatgctgctcagga
aaatatggaagggaggactaggaatctttggaaggcctaggggagacctg
tgtggcctttgaattatttcatcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_77555862_77555960
seq2: B6Ng01-162P24.b_943_990 (reverse)

seq1  GTCTCTCTCTCTCTCATTTTCAAGACAGAGTTTCTCTGTGTAGTCCTGGC  50
      ||||||||||||||||||                           |||||
seq2  GTCTCTCTCTCTCTCATT---------------------------CTGGC  23

seq1  TGTCTTGGAACTCACACTGTAGACCAGGCTGGCCTTGAACTTGGAGATC  99
      ||||||             ||           |||  ||||||||||||
seq2  TGTCTT-------------TA-----------CCTGTAACTTGGAGATC  48