BAC Information

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BAC

Clone NameB6Ng01-163K10
Chromosome6 (Build37)10 (Build37)
Map Location 18,835,442 - 18,835,96897,339,913 - 97,341,036
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163K10.bB6Ng01-163K10.g
ACCDH956184DH956185
length9571,112
definitionDH956184|Mus musculus domesticus DNA, BAC clone: B6Ng01-163K10, 5' end.DH956185|Mus musculus domesticus DNA, BAC clone: B6Ng01-163K10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(97,339,913 - 97,341,036)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtctc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcga
attgttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaaattt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttcctttagttagagtcacgccgagatattttatatta
atttgtg
gaattcacttctaaacaatgcctggtcttcaaatcaacactgcactccgc
agagcttctatttttgcttttcttgatcagtaccaggggaagagaatata
atgggtccttcagagaaacttttctgggtgacatagaactcaaggaaata
aaatcatgtaatgatttcaagacactttaaattcttgctggtccagctca
cttctgtaaacaattgatgtacaagtgcctggagggctgaagtgttgatg
gtacatagtgttgatggtacattcctactacattcacagaaatctaacac
atcacatgtccaagccatgcaaaaggaaccacccaaactttgccagagtt
cagcttaaaacccatgacaaaaagagaatgtaaaacaaatcagagtatgt
atgtctttataacactttaatttttaataggaagatagctgaagaaaaat
tcatacaattattttataagagaatattcaatttcagtaggaacttagaa
agtgttttctagttaaacttaaaatatctgcacttaaaatatctgatttt
aaatatcttcatttccacaaacctagtttgtttaagaagaattgcaacat
attaattggtctgtcagagaaaagtcagaggtagacagcaaggtgccaaa
atagatcttacttaggaacatttttgatagggcaaaaggtaaactcagtt
tagaactgtcttcaaatctaaacacaacaaaacaaaatgaaaggcaacat
cataggtagcttcaggcaaaaactttctgttaaaggaacagaagagaatt
ccttcaaaaagagcctagatgagacacagaaagaaaagaattattcataa
actaacatagcagaatcacgcaaagtgggaagttcggatccccaaaaggc
agttattaaatactgtacactaaaggatacataacactctaaaggagtta
agcaaacacaagttgggggtttgtttggttttttgatttttgtttgtttt
gttttttagaaattaccagaagaaccatgaacatctataaaatggttgat
ttgacgagggaacatttctaccaatggctcttggaggggaaatggagaaa
agagaaggataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-163K10.b_44_571 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| ||||||| |||  ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAACAATTCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGAGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAACAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr10_97339913_97341036
seq2: B6Ng01-163K10.g_66_1177

seq1  GAATTCACTTCTAAACAATGCCTGGTCTTCAAATCAACACTGCACTCCGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTAAACAATGCCTGGTCTTCAAATCAACACTGCACTCCGC  50

seq1  AGAGCTTCTATTTTTGCTTTTCTTGATCAGTACCAGGGGAAGAGAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTCTATTTTTGCTTTTCTTGATCAGTACCAGGGGAAGAGAATATA  100

seq1  ATGGGTCCTTCAGAGAAACTTTTCTGGGTGACATAGAACTCAAGGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCCTTCAGAGAAACTTTTCTGGGTGACATAGAACTCAAGGAAATA  150

seq1  AAATCATGTAATGATTTCAAGACACTTTAAATTCTTGCTGGTCCAGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGTAATGATTTCAAGACACTTTAAATTCTTGCTGGTCCAGCTCA  200

seq1  CTTCTGTAAACAATTGATGTACAAGTGCCTGGAGGGCTGAAGTGTTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAAACAATTGATGTACAAGTGCCTGGAGGGCTGAAGTGTTGATG  250

seq1  GTACATAGTGTTGATGGTACATTCCTACTACATTCACAGAAATCTAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATAGTGTTGATGGTACATTCCTACTACATTCACAGAAATCTAACAC  300

seq1  ATCACATGTCCAAGCCATGCAAAAGGAACCACCCAAACTTTGCCAGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGTCCAAGCCATGCAAAAGGAACCACCCAAACTTTGCCAGAGTT  350

seq1  CAGCTTAAAACCCATGACAAAAAGAGAATGTAAAACAAATCAGAGTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAAAACCCATGACAAAAAGAGAATGTAAAACAAATCAGAGTATGT  400

seq1  ATGTCTTTATAACACTTTAATTTTTAATAGGAAGATAGCTGAAGAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTATAACACTTTAATTTTTAATAGGAAGATAGCTGAAGAAAAAT  450

seq1  TCATACAATTATTTTATAAGAGAATATTCAATTTCAGTAGGAACTTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAATTATTTTATAAGAGAATATTCAATTTCAGTAGGAACTTAGAA  500

seq1  AGTGTTTTCTAGTTAAACTTAAAATATCTGCACTTAAAATATCTGATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTCTAGTTAAACTTAAAATATCTGCACTTAAAATATCTGATTTT  550

seq1  AAATATCTTCATTTCCACAAACCTAGTTTGTTTAAGAAGAATTGCAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTTCATTTCCACAAACCTAGTTTGTTTAAGAAGAATTGCAACAT  600

seq1  ATTAATTGGTCTGTCAGAGAAAAGTCAGAGGTAGACAGCAAGGTGCCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGGTCTGTCAGAGAAAAGTCAGAGGTAGACAGCAAGGTGCCAAA  650

seq1  ATAGATCTTACTTAGGAACATTTTTGATAGGGCAAAAGGTAAACTCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCTTACTTAGGAACATTTTTGATAGGGCAAAAGGTAAACTCAGTT  700

seq1  TAGAACTGTCTTCAAATCTAAACACAACAAAACAAAATGAAAGGCAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTGTCTTCAAATCTAAACACAACAAAACAAAATGAAAGGCAACAT  750

seq1  CATAGGTAGCTTCAGGCAAAAACTTTCTGTTAAAGGAACAGAAGAGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTAGCTTCAGGCAAAAACTTTCTGTTAAAGGAACAGAAGAGAATT  800

seq1  CCTTCAAAAAGAGCCTAGATGAGACACAGAAAGAAAAGAATTATTCATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAAAAGAGCCTAGATGAGACACAGAAAGAAAAGAATTATTCATAA  850

seq1  ACTAACATAGCAGAATCACGCAAAGTGGGAAGTTCGGATCCCCAAAAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACATAGCAGAATCACGCAAAGTGGGAAGTTCGGATCCCCAAAAGGC  900

seq1  AGTTATTAAATACTGTACACTAAAGGATACATAACACTCTAAAGGAGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTAAATACTGTACACTAAAGGATACATAACACTCTAAAGGAGTTA  950

seq1  AGCAAACACAAGTGGGGGTTTTGTTTTGTTTTTTTGATTTTTGTTTGTTT  1000
      ||||||||||||| |||| |||| |||| |||||||||||||||||| ||
seq2  AGCAAACACAAGTTGGGGGTTTG-TTTGGTTTTTTGATTTTTGTTTG-TT  998

seq1  TTGTTTTTTAGAAATTACCAGAAGAACCATGAACCATCTATTAAAATGG-  1049
      ||||||||||||||||||||||||||||||||| |||||| |||||||| 
seq2  TTGTTTTTTAGAAATTACCAGAAGAACCATGAA-CATCTA-TAAAATGGT  1046

seq1  TGATTTGACAGAGGGAACATTTTTTCAAACAAATTGCTTCATTGGAGGGA  1099
      ||||||||| |||||||||||| |    || ||| |||   |||||||  
seq2  TGATTTGAC-GAGGGAACATTTCT----ACCAATGGCT--CTTGGAGG--  1087

seq1  GAAAATGGAAGAAAGAGAAGGATAA  1124
      | |||||||  ||||||||||||||
seq2  GGAAATGGAGAAAAGAGAAGGATAA  1112