BAC Information

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BAC

Clone NameB6Ng01-164D05
Chromosome10 (Build37)
Map Location 54,531,697 - 54,532,594
singlet/doubletsinglet
Overlap genenone
Upstream geneMan1a, LOC100041898
Downstream geneLOC382460, LOC100041927
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164D05.bB6Ng01-164D05.g
ACCDH956587DH956588
length1,145901
definitionDH956587|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D05, 5' end.DH956588|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtagaatttttggggtcacttaagtatactaacatgtcat
ctgtaaatcgtgatactatgtctacttcctttccaatttgtatccctttg
atttccttttgttgtctattttctctatctagaaattcaagttctatatt
gaatagatagggagagagaggactcccttgtctgggtcctgattttagtg
gaatccattcaactttctctccatttaatttcatgttggttactggtttg
ctatatattgcttttactatatttgggtatgtgccttgaattcctgatct
ctccaagacttttaacataaagtgatgctgaattttgtcaaatgctgttt
caacatctaatgaaatgatcatgcgttttgttttcctttgagtttgttta
tgtagtggattacattgatggttttctgtatgttgaaccacctctgcatc
tctggcacgaagcctacttgatgttggtgaatgttcattttgatgtgttc
ttggattcatttggcaagaattttagtgagtatttttgcgttgatgttca
taagggaaattggtctgaagttctctttcttttttgggtctttgtgtggt
tttggtatcagtgtaattgtggctttatagaatgagttaggtagtgttcc
ttctatttctattttgtataataatttgaagagtattggtatcaggtctt
ctgtgaaggtctaatagaattctgcactaaaaccatctggtccttggctt
tttttgatttggagacttttaatgactgtttctatttctttatgggttat
gggactgttagtttatctgatcctgttttaactttggcaccttgtatgtg
tctagaaaatttccattttgtccagattttccactttggttgagtataaa
cttttatagtagatctgtttttttttaatttcacagtttccatggtttta
tctccctttcatttctgattttataatttgatactgtctctgtgccatct
ggttaatctggctaagggtttttcctttggttgatttttctcaaagaacc
agctctgcctgttgaatccttgtaaaggtctttgcttcgttggtgatttc
tggtccgagttaaatatatccggcggtccactctcttggtgtctc
gaattccagatgaagtctcttggcaggagagtaaagaacatagtttcatt
gaagccttacatccttgtaacctagaagagttgatgactcagatcaagtg
tttcaacttcagtcagccaataaattggtcagtttctttgttctaatgag
atatttgactgattggatattgacccccttgttgagaaggcaatccaatt
tactggttatacaaattcaaatgttaatctcattctcaatctcagtggca
aacaaatgtttaattaaatgtctgggtagctcatggtctatagcccagtc
aagttgacacagaaaattagcattgtcccagacaacacagcagctgctct
cctcctatgtacagaattcaaagtctatacttttaaaacttttaaattat
ttttaatattttaaaattgaaacataatcacataagtcttttcttcattt
tctaccactagcccctactatgtaccccattgttcactatagaaattatg
tctattgtttatttagtatatatatatatatatatatatatatatatata
tatatatgcttacatataattttaaaattagatatattatttaactagat
atctaaatatcatatatttaatatatgcacatctaaaatgtattcactca
tgtatttaatgtatgtatattatttagtgtgtatatataccatacacaca
cacacacacacacacacacacacacacatttttctatttgcatatataga
aaaaattgtaagatccataggttcaggactcttgctgtgagattgtgttt
cttgaaaaaggacaggaaagctcaacaacatggctgcctatcaagacttg
ggaaacagagaagcaatatatttgttacatggataggtgaaatatcaaga
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_54531697_54532594
seq2: B6Ng01-164D05.g_71_971

seq1  GAATTCCAGATGAAGTCTCTTGGCAGGAGAGTAAAGAACATAGTTTCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATGAAGTCTCTTGGCAGGAGAGTAAAGAACATAGTTTCATT  50

seq1  GAAGCCTTACATCCTTGTAACCTAGAAGAGTTGATGACTCAGATCAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTTACATCCTTGTAACCTAGAAGAGTTGATGACTCAGATCAAGTG  100

seq1  TTTCAACTTCAGTCAGCCAATAAATTGGTCAGTTTCTTTGTTCTAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACTTCAGTCAGCCAATAAATTGGTCAGTTTCTTTGTTCTAATGAG  150

seq1  ATATTTGACTGATTGGATATTGACCCCCTTGTTGAGAAGGCAATCCAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGACTGATTGGATATTGACCCCCTTGTTGAGAAGGCAATCCAATT  200

seq1  TACTGGTTATACAAATTCAAATGTTAATCTCATTCTCAATCTCAGTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTATACAAATTCAAATGTTAATCTCATTCTCAATCTCAGTGGCA  250

seq1  AACAAATGTTTAATTAAATGTCTGGGTAGCTCATGGTCTATAGCCCAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGTTTAATTAAATGTCTGGGTAGCTCATGGTCTATAGCCCAGTC  300

seq1  AAGTTGACACAGAAAATTAGCATTGTCCCAGACAACACAGCAGCTGCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGACACAGAAAATTAGCATTGTCCCAGACAACACAGCAGCTGCTCT  350

seq1  CCTCCTATGTACAGAATTCAAAGTCTATACTTTTAAAACTTTTAAATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTATGTACAGAATTCAAAGTCTATACTTTTAAAACTTTTAAATTAT  400

seq1  TTTTAATATTTTAAAATTGAAACATAATCACATAAGTCTTTTCTTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATTTTAAAATTGAAACATAATCACATAAGTCTTTTCTTCATTT  450

seq1  TCTACCACTAGCCCCTACTATGTACCCCATTGTTCACTATAGAAATTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCACTAGCCCCTACTATGTACCCCATTGTTCACTATAGAAATTATG  500

seq1  TCTATTGTTTATTTAGTATATATATATATATATATATATATATATATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTTTATTTAGTATATATATATATATATATATATATATATATATA  550

seq1  TATATATGCTTACATATAATTTTAAAATTAGATATATTATTTAACTAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGCTTACATATAATTTTAAAATTAGATATATTATTTAACTAGAT  600

seq1  ATCTAAATATCATATATTTAATATATGCACATCT-AAATGTATTCACTCA  649
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATCTAAATATCATATATTTAATATATGCACATCTAAAATGTATTCACTCA  650

seq1  TGTATTTAATGTATGTATATTATTTAGTGTGTATATATACCATACACACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAATGTATGTATATTATTTAGTGTGTATATATACCATACACACA  700

seq1  CACACACACACACACACACACACACACA-TTTTCTATATGCATATATAG-  747
      |||||||||||||||||||||||||||| |||||||| ||||||||||| 
seq2  CACACACACACACACACACACACACACATTTTTCTATTTGCATATATAGA  750

seq1  AAAAATTGTAAGATCCATAGGTTCAGGACTC-TGCTGTGAGATTGTGTTT  796
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAAATTGTAAGATCCATAGGTTCAGGACTCTTGCTGTGAGATTGTGTTT  800

seq1  CTTG-AAAAGGACAGGAAAGCTCAACAACATGGCTGCCTAAGCAAGACCT  845
      |||| |||||||||||||||||||||||||||||||||| | |||||| |
seq2  CTTGAAAAAGGACAGGAAAGCTCAACAACATGGCTGCCT-ATCAAGACTT  849

seq1  GGGAAACAGAGCAGCAATAAATATGTTAACATGGATAGGTGAAATATCAA  895
      ||||||||||| ||||||| || |||| ||||||||||||||||||||||
seq2  GGGAAACAGAGAAGCAATATATTTGTT-ACATGGATAGGTGAAATATCAA  898

seq1  GAG  898
      |||
seq2  GAG  901