BAC Information

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BAC

Clone NameB6Ng01-165C15
Chromosome10 (Build37)
Map Location 95,662,006 - 95,787,040
singlet/doubletdoublet
Overlap genenone
Upstream geneCradd, Socs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4, EG628119, Eea1, EG432491
Downstream geneLOC667380, Btg1, LOC628256, 4930556N09Rik, EG667407
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165C15.bB6Ng01-165C15.g
ACCDH957296DH957297
length1,0521,076
definitionDH957296|Mus musculus domesticus DNA, BAC clone: B6Ng01-165C15, 5' end.DH957297|Mus musculus domesticus DNA, BAC clone: B6Ng01-165C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,785,989 - 95,787,040)(95,662,006 - 95,662,919)
sequence
gaattcaatgtttgatccctatacttttactcttgtcttatacaatttat
atcccacacagaataattaactttaaaaacaaaacagggtacttatattt
tggtcaaaatgtagttacacctctaataattgtcataattataaaaatga
aagaaaattacacacatacacactttatacaaatgcatgcacatgtgcac
acacacatataaatttcacattttgaaccagaatacagttctgcgattcc
ctacaataaaggaaaatcatgaggtgatataaaggggtgaccatccttgc
tatcccattttgcctggggtcctagaacatgagtgctaagtactggatac
gttctttacctctaagcctggtgctcatgacagtaggctgctttggggaa
gctggtagcgaatcatgcaaggcttgcctttccagatgagttgaggaaat
ggaggcagatgtttagagaagccaggaagctaggattgaagaagtggata
ccagaataaagaaagctgaacaaagaaagacaagagctcttcagatacac
agaagggtcccctttaggcacaggttgaggtccgatgtgaacatttataa
cagacagcttctgagtccaaggagtgagaggataagagatgagttacaaa
acccttgggaaacacacagagctgacattcatttatgatcccaaggccaa
gaagggaaatatttcatagttcaataaccatgaggtcaaatcctcagagg
gccactattttggtaatgggagtaagatatctctagattaataacttctg
ataagatccagctgcctccaagcaactcaactgtgcccaaactgaacaac
agcatgattgctaagttgttttaagaaatacaacaaggtcagactgtaga
aagaagttaatgactagaaaaggaataggccaagatgcttcagtagcaga
caggactcctaaaacacttattggtctatattacctggtatgtgttaaaa
aatgttatgcaaaaatttgggcatgataagaagggagcatggaaatatga
ga
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaga
cgcgttctcacgcccggccaggaagaacaccacagaccagaatcttctgc
ggcaaagctttattgcttacatcttcaggagccagagtgcaagaagcaag
agagcaagaagcaagagagagagaaaacgaaaccccgtccctattaagga
gaattctccttcgcctaggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacatggagtagagaacca
ccctcggcatatgcgcagattatttgtttaccacttagaacacagctgtc
agcgccatcttgtaacggcgaatgtgggcgcggctcccaacactaaactt
taattgttaagatatagctagttcctgctaaacatccctgaccactcaac
tgtagaagtggccactccccacccccacccccaccccaacacctctctga
gacctcacatggctacttggttcttctccctccaaagtatagccaactct
cctctcttgcatactggcctcatatatggactgattagagggaacatagc
atccggagacctagagcttagggagaagatgacctcaactctttcaaggc
accttctcaagaactggtccctttgggtcttgtagaaaactaatatacaa
aaactcctctctttgccaggaccactgtaatgtcaagcagcccgcctctc
tgacccagaactaatgcagtgtatgggagaccacctctctcaccaaaacc
actagaatggatggcagacatatggttgtcataatgcacgtacaggtacc
aaacaattttgttaccacttcattgccattaccactcagggcaaagattc
caacatggaaacacccccagaaactgttggaagtgtctttttctcttgga
gatgtcctgtccagattgttggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_95785989_95787040
seq2: B6Ng01-165C15.b_46_1097 (reverse)

seq1  TCTCATATTTTCATGCTCCCTCTTTATCATGCCC-AATTTTTGCATAACA  49
      |||||||||| ||||||||||  ||||||||||| |||||||||||||||
seq2  TCTCATATTTCCATGCTCCCTTCTTATCATGCCCAAATTTTTGCATAACA  50

seq1  TTTTTTAA-ACATA-CAGGTAATATAGA-CAATAAGTGTTTTA-GAGTCC  95
      |||||||| ||||| ||||||||||||| |||||||||||||| |||| |
seq2  TTTTTTAACACATACCAGGTAATATAGACCAATAAGTGTTTTAGGAGT-C  99

seq1  CTGTCTGCTACCTGAAGCATCTTGGCCTATTCCTTTTTCTAGTCATTAAC  145
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  CTGTCTGCTA-CTGAAGCATCTTGGCCTATTCC-TTTTCTAGTCATTAAC  147

seq1  TTCTTTCTACAGTCCTGACCTTGTTGTATTTCTTAAAACAACCTTAGCAA  195
      ||||||||||||| ||||||||||||||||||||||||||| ||||||||
seq2  TTCTTTCTACAGT-CTGACCTTGTTGTATTTCTTAAAACAA-CTTAGCAA  195

seq1  TCATGCTGTTGTTCAGTTTGGGCACAGTTGAGTTGCTTGGAGGCAGCTGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGTTGTTCAGTTTGGGCACAGTTGAGTTGCTTGGAGGCAGCTGG  245

seq1  ATCTTATCAGAAGTTATTAATCTAGAGATATCTTACTCCCATTACCAAAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATCAGAAGTTATTAATCTAGAGATATCTTACTCCCATTACCAAAA  295

seq1  TAGTGGCCCTCTGAGGATTTGACCTCATGGTTATTGAACTATGAAATATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCCCTCTGAGGATTTGACCTCATGGTTATTGAACTATGAAATATT  345

seq1  TCCCTTCTTGGCCTTGGGATCATAAATGAATGTCAGCTCTGTGTGTTTCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTTGGCCTTGGGATCATAAATGAATGTCAGCTCTGTGTGTTTCC  395

seq1  CAAGGGTTTTGTAACTCATCTCTTATCCTCTCACTCCTTGGACTCAGAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTTTTGTAACTCATCTCTTATCCTCTCACTCCTTGGACTCAGAAG  445

seq1  CTGTCTGTTATAAATGTTCACATCGGACCTCAACCTGTGCCTAAAGGGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTTATAAATGTTCACATCGGACCTCAACCTGTGCCTAAAGGGGA  495

seq1  CCCTTCTGTGTATCTGAAGAGCTCTTGTCTTTCTTTGTTCAGCTTTCTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTGTGTATCTGAAGAGCTCTTGTCTTTCTTTGTTCAGCTTTCTTT  545

seq1  ATTCTGGTATCCACTTCTTCAATCCTAGCTTCCTGGCTTCTCTAAACATC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTATCCACTTCTTCAATCCTAGCTTCCTGGCTTCTCTAAACATC  595

seq1  TGCCTCCATTTCCTCAACTCATCTGGAAAGGCAAGCCTTGCATGATTCGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCATTTCCTCAACTCATCTGGAAAGGCAAGCCTTGCATGATTCGC  645

seq1  TACCAGCTTCCCCAAAGCAGCCTACTGTCATGAGCACCAGGCTTAGAGGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCTTCCCCAAAGCAGCCTACTGTCATGAGCACCAGGCTTAGAGGT  695

seq1  AAAGAACGTATCCAGTACTTAGCACTCATGTTCTAGGACCCCAGGCAAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACGTATCCAGTACTTAGCACTCATGTTCTAGGACCCCAGGCAAAA  745

seq1  TGGGATAGCAAGGATGGTCACCCCTTTATATCACCTCATGATTTTCCTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAGCAAGGATGGTCACCCCTTTATATCACCTCATGATTTTCCTTT  795

seq1  ATTGTAGGGAATCGCAGAACTGTATTCTGGTTCAAAATGTGAAATTTATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGGGAATCGCAGAACTGTATTCTGGTTCAAAATGTGAAATTTATA  845

seq1  TGTGTGTGTGCACATGTGCATGCATTTGTATAAAGTGTGTATGTGTGTAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGCACATGTGCATGCATTTGTATAAAGTGTGTATGTGTGTAA  895

seq1  TTTTCTTTCATTTTTATAATTATGACAATTATTAGAGGTGTAACTACATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCATTTTTATAATTATGACAATTATTAGAGGTGTAACTACATT  945

seq1  TTGACCAAAATATAAGTACCCTGTTTTGTTTTTAAAGTTAATTATTCTGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAAAATATAAGTACCCTGTTTTGTTTTTAAAGTTAATTATTCTGT  995

seq1  GTGGGATATAAATTGTATAAGACAAGAGTAAAAGTATAGGGATCAAACAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATATAAATTGTATAAGACAAGAGTAAAAGTATAGGGATCAAACAT  1045

seq1  TGAATTC  1052
      |||||||
seq2  TGAATTC  1052

seq1: chr10_95662006_95662919
seq2: B6Ng01-165C15.g_230_1144

seq1  GCCCGGCCAGGAAGAACACCACAGACCAGAATCTTCTGCGGCAAAGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGCCAGGAAGAACACCACAGACCAGAATCTTCTGCGGCAAAGCTTT  50

seq1  ATTGCTTACATCTTCAGGAGCCAGAGTGCAAGAAGCAAGAGAGCAAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTACATCTTCAGGAGCCAGAGTGCAAGAAGCAAGAGAGCAAGAAG  100

seq1  CAAGAGAGAGAGAAAACGAAACCCCGTCCCTATTAAGGAGAATTCTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAGAGAGAAAACGAAACCCCGTCCCTATTAAGGAGAATTCTCCTT  150

seq1  CGCCTAGGACGTGTCACTCCCTGATTGGCTGCAGCCCATCGGCCGAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTAGGACGTGTCACTCCCTGATTGGCTGCAGCCCATCGGCCGAGTTG  200

seq1  ACGTCACGGGGAAGGCAGAGCACATGGAGTAGAGAACCACCCTCGGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCACGGGGAAGGCAGAGCACATGGAGTAGAGAACCACCCTCGGCATA  250

seq1  TGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCAGATTATTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTT  300

seq1  GTAACGGCGAATGTGGGCGCGGCTCCCAACACTAAACTTTAATTGTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACGGCGAATGTGGGCGCGGCTCCCAACACTAAACTTTAATTGTTAAG  350

seq1  ATATAGCTAGTTCCTGCTAAACATCCCTGACCACTCAACTGTAGAAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCTAGTTCCTGCTAAACATCCCTGACCACTCAACTGTAGAAGTGG  400

seq1  CCACTCCCCACCCCCACCCCCACCCCAACACCTCTCTGAGACCTCACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCCACCCCCACCCCCACCCCAACACCTCTCTGAGACCTCACATG  450

seq1  GCTACTTGGTTCTTCTCCCTCCAAAGTATAGCCAACTCTCCTCTCTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTGGTTCTTCTCCCTCCAAAGTATAGCCAACTCTCCTCTCTTGCA  500

seq1  TACTGGCCTCATATATGGACTGATTAGAGGGAACATAGCATCCGGAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCCTCATATATGGACTGATTAGAGGGAACATAGCATCCGGAGACC  550

seq1  TAGAGCTTAGGGAGAAGATGACCTCAACTCTTTCAAGGCACCTTCTCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTTAGGGAGAAGATGACCTCAACTCTTTCAAGGCACCTTCTCAAG  600

seq1  AACTGGTCCCTTTGGGTCTTGTAGAAAACTAATATACAAAAACTCCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGTCCCTTTGGGTCTTGTAGAAAACTAATATACAAAAACTCCTCTC  650

seq1  -TTGCCAGGACCACTGTAATGTCAAGCAGCCCGCCTCTCTGACCCAGAAC  699
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGGACCACTGTAATGTCAAGCAGCCCGCCTCTCTGACCCAGAAC  700

seq1  TAATGCAGTGTATGGAAGACCACCTCTCTCACCAAAACCACTAGAATGGA  749
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TAATGCAGTGTATGGGAGACCACCTCTCTCACCAAAACCACTAGAATGGA  750

seq1  TGGCAGAACATATGG-TGGCATAATGCACGTACAGGTACCAAACAAATGT  798
      |||||| |||||||| || ||||||||||||||||||||||||||| | |
seq2  TGGCAG-ACATATGGTTGTCATAATGCACGTACAGGTACCAAACAATTTT  799

seq1  GTTACCAC-TCAATGCCATTACCACTCAGGGCAAAGAATACAACATGGGA  847
      |||||||| ||| |||||||||||||||||||||||| | |||||| |||
seq2  GTTACCACTTCATTGCCATTACCACTCAGGGCAAAGATTCCAACAT-GGA  848

seq1  AACACCCCCAGAAACTGTTGG-AGTGTCTTTTTCTC-TGGAGATAGTCCT  895
      ||||||||||||||||||||| |||||||||||||| ||||||| |||| 
seq2  AACACCCCCAGAAACTGTTGGAAGTGTCTTTTTCTCTTGGAGAT-GTCC-  896

seq1  TGTCCAGATTGTTTGGGGA  914
      ||||||||||||| |||||
seq2  TGTCCAGATTGTTGGGGGA  915