BAC Information

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BAC

Clone NameB6Ng01-165N22
Chromosome10 (Build37)
Map Location 104,053,543 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165N22.bB6Ng01-165N22.g
ACCDH957810DH957811
length1,137935
definitionDH957810|Mus musculus domesticus DNA, BAC clone: B6Ng01-165N22, 5' end.DH957811|Mus musculus domesticus DNA, BAC clone: B6Ng01-165N22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttttatcatac
agatcttttacttccttagttagagtcacgccgagatattttataatatt
gtgactattgagaaggtgttgtttccctaatttccttctcggcctgttat
ctttgttagaggaaggccattgacttgttgagtttattttatatccagcc
tacttcacaaagctgtttacaggattagaaattcctgtggtattttaagg
tccctttataactaacgtacttctgctcaaatgtgaa

gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcgtcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaatgatgtggagaaagaggaacactcctccattgttggtg
ggattaaaagcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacataatactaccggaggatctagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtatgaaggacacatgctccactct
gttcatagcagccttatttataatagccagaagctggaaaaaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaacttatgaaattcctaggcaa
atggatggacttggaggccatcatcctgagtgaggtaacacaatcacaaa
ggaacttacacagtatgtactcactgataagtggatattaggccaaaact
taggatacaacacaaaaagtatagtcatttactccttgcattgtcaatat
gtctcttacattaagatatatgatgtatagtatctgtcatataaatagta
aatacttctgaaatgcttttgttagagccacaattgcaagatgaaaaatc
aaacaaacaagcaaacaaacaaacaaacttatttcgacatgaggcttcac
tctgtaggtgttactggatagatcacgctagcctcaaactccagaaaatt
tcctgcccctacttcctggaccttagcattacaggcataacaaaaactac
cacacaagctggagtgaaactgctcctaatagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053543_104054363
seq2: B6Ng01-165N22.g_66_673 (reverse)

seq1  GTATCCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTACATATTGC  50
      ||||||||||||| ||| |||||||||||||||||||||||||||| || 
seq2  GTATCCTAAGTTT-TGGCCTAATATCCACTTATCAGTGAGTACATACTGT  49

seq1  GCGAGTTCCTTTGTGATTGGGTTACCGCACTCAGGATGATACTCTCCAGG  100
      |  |||||||||||||||| |||||| |||||||||||||   ||||| |
seq2  GTAAGTTCCTTTGTGATTGTGTTACCTCACTCAGGATGATGGCCTCCAAG  99

seq1  TCCATCCATTTGCCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTCC  150
      |||||||||||||||||||||||||||| ||||||||||||||||||   
seq2  TCCATCCATTTGCCTAGGAATTTCATAAGTTCATTCTTTTTAATAGC---  146

seq1  ATTTACATTTAATTTAATTAATGTAATTACAATTAATTAATTTATTAATT  200
                                                        
seq2  --------------------------------------------------  146

seq1  AAATAATTTAATAATTTAATTGATAAATTAATTTAATTAATTAATTTAAT  250
                                                        
seq2  --------------------------------------------------  146

seq1  TAATTAAATTAAATAATAATTTAATAATAAATTAAATATTTTAAAATTAA  300
                                                        
seq2  --------------------------------------------------  146

seq1  TAATAATTTTATAAGTAAATAATTTAATTAATGTAATTTAATTAATGTAA  350
                 | ||||                             ||| 
seq2  -----------TGAGTA-----------------------------GTA-  155

seq1  TTACATTACATTTAATAGCTCCATTGTGTAAATGTACCACATTTTCTGTA  400
                        ||||||||||||||||||||||||||||||||
seq2  ------------------CTCCATTGTGTAAATGTACCACATTTTCTGTA  187

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  450
      || ||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTTTTTCCAGCTTCTGGCTATT  237

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  500
      |||||||||||||||||||| | ||||||||||||||||||| |||||||
seq2  ATAAATAAGGCTGCTATGAACAGAGTGGAGCATGTGTCCTTCATACCGGT  287

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  550
      |||| |||||||||||||||||||||| |||||||||||| |||||||||
seq2  TGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTGCTAGATCCTCCG  337

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  600
      |||||| ||||||||||||||| | |||||||||||| ||||||||||||
seq2  GTAGTATTATGTCCAATTTTCTAAGGAACCGCCAGACTGATTTCCAGAGT  387

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  650
      |||||||||||| |  ||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCTTTTAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  437

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  700
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCATTGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  487

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  537

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  800
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGACGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCA  587

seq1  GTATTCCTCAGGTGAGAATTC  821
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  608


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