MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-166L03
Chromosome	10 (Build37)
Map Location	36,246,342 - 36,247,581
singlet/doublet	singlet
Overlap gene	Hs3st5
Upstream gene	LOC100041585, LOC667860
Downstream gene	Hdac2, Marcks, LOC100040846
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041585 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 379 ESTs, 9 Proteins

name	LOC667860 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667860
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Hs3st5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319415 MGI:2441996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hdac2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15182 MGI:1097691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Marcks (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17118 MGI:96907
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040846 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100041585 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260721 GeneID:100041585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 379 ESTs, 9 Proteins product : similar to S-adenosylmethionine decarboxylase transcript_id : XM_001476532.1

name	Hs3st5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487076 GeneID:319415 MGI:2441996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heparan sulfate (glucosamine) 3-O-sulfotransferase 5 transcript_id : NM_001081208.1

name	Hdac2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87162463 GeneID:15182 MGI:1097691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histone deacetylase 2 transcript_id : NM_008229.2

name	Marcks (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865974 GeneID:17118 MGI:96907
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myristoylated alanine rich protein kinase C substrate transcript_id : NM_008538.2

name	LOC100040846 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260682 GeneID:100040846
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100040846 transcript_id : XM_001475382.1

name	LOC100041585 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260722 GeneID:100041585
definition	codon_start : 1 product : similar to S-adenosylmethionine decarboxylase protein_id : XP_001476582.1

name	Hs3st5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487077 GeneID:319415 MGI:2441996
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008467 - heparin-glucosamine 3-O-sulfotransferase activity [Evidence ISS] codon_start : 1 note : heparan sulfate D-glucosaminyl 3-O-sulfotransferase 5 product : heparan sulfate (glucosamine) 3-O-sulfotransferase 5 protein_id : NP_001074677.1

name	Hdac2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87162464 CCDS:CCDS23783.1 GeneID:15182 MGI:1097691
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0000792 - heterochromatin [Evidence IDA]; GO:0000118 - histone deacetylase complex [Evidence TAS]; GO:0005634 - nucleus [Evidence TAS] [Evidence IDA]; GO:0005657 - replication fork [Evidence IDA] GO_function : GO:0004407 - histone deacetylase activity [Evidence TAS] [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence TAS] GO_process : GO:0016568 - chromatin modification [Evidence TAS] [Evidence IEA]; GO:0016575 - histone deacetylation [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : histone deacetylase 2 protein_id : NP_032255.2

name	Marcks (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678768 CCDS:CCDS23784.1 GeneID:17118 MGI:96907
definition	GO_component : GO:0005938 - cell cortex [Evidence IDA]; GO:0005813 - centrosome [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0042585 - germinal vesicle [Evidence IDA]; GO:0016020 - membrane [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 product : myristoylated alanine rich protein kinase C substrate protein_id : NP_032564.1

name	LOC100040846 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260683 GeneID:100040846
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475432.1

name	LOC667860 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667860
definition	number : 1 pseudo : _no_value

clone name	MSMg01-165B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-218F06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-525B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131N06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-398E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044F05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-166L03.b	B6Ng01-166L03.g
ACC	DH958398	DH958399
length	1,243	1,165
definition	DH958398\|Mus musculus domesticus DNA, BAC clone: B6Ng01-166L03, 5' end.	DH958399\|Mus musculus domesticus DNA, BAC clone: B6Ng01-166L03, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttcaaaggcccttttcatggtctccacagcagtggtctgcagg attcctgtcacagtcactgctttgctctaaatggagattggccattgtca acagagacctcataggctgccctgttgcctttttggaatttataatttat atttagaatctgtaaccactttctgtgatgccagctctgcagctgacttt tcttaatgtgttatacgagcaaatgtagattgtagctataaacacagtgc aagaaaaaggaaggcccatctgtctccttcagacttcattagggaaggct atgccaacaatatttttagtatggtctttcaaattaaggttaagttgctt tgaagccagtcagccatagtaggtttatttattttgagggccagcatgaa actaattgaaaatacatccactttccaaagacatatcatgtagctacctt aaaaatgcatttatttttcagttgcgtaggaaatatatttacagcacaga gaaatttccttgtctagttttggtgataaaaaattccaaaatggtaaaca gttccatcacttgtgttaatggtactaatacaagtgagcattctgtcagc aaaggcctttatgttctcaggattgcatacatgaaaatatactatgtatt atgttaatctaaacctcataaaagggacaaattggactgatcatattaaa agcggctttcccctaagtatgattttaataattaatctgagtgagcattc tatcatatcactgggctattaagtgggcagaatgtagcaaacttcctgag tttcttttgcttcccattagcaagatataggcagaaggcacaatcagata aatagccaaatgccaaacaaattatacatgtacatccaatgtgtaatttt tttcagaccactttacaccatgtcaaacctaagattgtcaaagagttcat attatattatattatgtcatatcatataatactttgtcacatatgtctgt aaagatctttatagccagtgacttgcacttatgtaacaaatagcaaacac tgaatgaatggaaccatcacaggaagcagttcccaggaccatccctcttt atataattgcagacctgtggagcctaaagagcagaagcctcagcctgaac tgggttgagtcaaatgccaagagacacatagtcgaaaggaaagctggatt ctctggtaaccataatgggggggaagacctaagaaaaccaaat	gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactccttcattgttggtg ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaacaggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacagaaaatatggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa gaaactcacacaatatctattcactgataagtggatattagccccaaacc taggatacccaagatataagatataatttgctaaacacatgaaactcaag aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa caaaacacccatggaaggagttacagagacaaagtttggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataatc agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac acagaagtggatgctcacagtcagctaatggatggatcatagggctccca tggagagctagagaagtagccaaggactaaagggatctgcaccctatagt ggaacaacattatgaactaccagtacccgagctcttgactctagctgcat atatatcaagatgctagtcggccatcactggaagagaggtccatgactgc actttaattgtcccagtcaggtaacatcagccaaaagggggatgtgtggc acaggggaattgggg
quality values	Open. Hide. 61 41 33 30 61 61 61 61 61 26 14 47 61 61 47 47 61 61 61 55 55 55 38 24 49 61 52 36 52 43 49 36 24 43 37 43 59 61 61 61 55 59 61 61 61 59 61 61 59 61 59 49 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 59 59 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 55 55 55 50 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 61 61 53 61 61 61 61 61 61 61 61 61 53 47 50 53 43 50 53 53 53 53 50 61 61 61 61 61 61 61 53 53 53 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 42 47 61 61 61 61 61 61 53 61 61 61 61 61 61 47 52 53 53 50 53 53 53 53 53 53 57 57 57 57 53 53 57 57 47 42 45 53 47 53 52 57 57 57 57 43 57 57 57 53 57 52 53 47 52 57 52 57 57 47 53 50 50 53 50 47 47 43 53 26 47 47 47 52 53 47 53 43 53 50 53 45 45 47 57 53 43 47 47 50 38 50 38 47 38 50 57 57 57 52 52 52 39 52 53 53 53 53 53 57 52 39 41 41 53 50 52 52 45 45 53 53 45 53 50 47 47 44 44 53 41 32 53 50 57 57 53 26 43 53 52 34 47 43 46 31 43 46 41 53 35 53 57 37 52 40 41 50 45 50 53 42 57 57 46 37 40 52 53 37 57 57 53 31 53 35 26 38 31 41 38 36 36 38 52 41 15 57 57 37 47 37 38 42 52 30 39 33 33 37 47 40 45 51 27 52 53 57 33 53 27 33 33 37 32 42 44 36 30 40 44 48 39 40 34 52 38 57 57 37 33 37 33 41 19 26 33 41 41 57 41 27 41 34 53 40 33 48 34 39 30 44 33 53 40 30 35 29 25 44 40 44 48 23 48 51 29 30 25 46 46 37 30 35 29 20 22 44 31 24 30 47 37 24 44 32 30 31 29 25 30 30 30 32 44 30 36 34 39 27 5 39 22 25 37 37 25 31 28 21 30 31 27 38 46 20 29 29 31 29 29 25 45 28 29 48 32 29 29 47 29 29 27 46 29 27 27 28 29 29 29 26 29 41 28 28 29 21 29 17 29 23 17 21 39 16 34 28 23 32 26 46 51 51 51 51 28 34 22 21 43 22 29 24 23 28 51 33 24 28 23 27 29 12 29 30 28 28 26 31 32 13 19 29 31 29 16 29 20 20 29 28 33 25 51 32 27 43 19 22 24 29 30 29 30 25 27 20 19 29 24 27 29 28 33 20 26 21 21 43 29 19 25 8 20 26 28 27 31 22 7 6 12 31 27 28 25 51 28 32 13 18 14 14 12 14 28 22 31 22 26 10 33 18 38 51 19 23 25 14 19 18 44 19 9 9 6 8 20 20 12 8 8 15 4 7 21 17 27 23 13 6 7 5 8 24 16 6 22 23 22 17 44 22 19 17 16 25 17 42 20 7 6 14 29 6 7 6 10 26 17 23 23 26 20 14 10 20 11 5 6 17 14 3 4 10 13 23 15 13 24 16 12 21 7 10 12 19 9 10 10 16 5 7 11 17 11 9 6 7 8 5 14 16 5 10 10 5 7 9 4 5 5 16 8 6 23 8 15 5 11 7 6 4 20 6 12 7 12 13 13 15 9 22 4 4 4 5 9 20 6 6 3 6 6 5 13 4 8 8 17 6 10 10 6 6 3 6 6 7 3 5 3 1 5 2 5 5 3 8 6 6 9 4 4 13 4 3 4 8 12 5 9 4 3 2 3 3 16 18 8 9 6 5 13 6 2 2 3 3 1 6 4 4 4 5 5 10 7 13 8 8 8 15 19 6 16 5 21 4 12 8 18 30 30 13 5 6 13 4 9 10 8 9 5 4 4 15 8 16 7 3 3 3 7 12 4	Open. Hide. 61 61 55 49 61 61 61 49 31 61 49 52 43 41 35 59 61 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 55 61 61 61 61 59 59 61 61 59 59 55 59 59 61 61 61 55 37 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 59 61 59 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 55 55 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 55 52 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 61 61 61 61 52 49 55 55 55 55 61 61 61 61 55 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 55 55 55 55 50 55 61 61 61 55 55 55 55 55 55 55 55 61 55 50 61 55 61 61 61 61 61 61 61 61 53 61 50 50 61 61 61 61 61 61 61 61 61 50 53 50 52 61 50 53 52 53 50 53 52 61 61 61 61 61 50 50 53 47 50 50 50 50 50 50 39 50 61 53 61 61 61 61 61 50 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 47 61 52 53 50 50 47 47 38 43 47 39 53 61 61 61 61 61 53 61 61 53 47 47 53 53 57 53 53 57 57 47 53 53 53 45 53 52 52 52 53 53 53 53 57 57 39 46 42 50 47 47 38 42 47 47 53 53 50 53 36 47 57 52 57 57 47 53 57 50 53 53 53 53 52 53 53 53 53 52 57 53 53 53 53 34 53 53 53 47 50 53 47 43 53 57 47 47 37 50 38 47 52 30 32 39 38 44 42 38 52 47 43 43 53 36 57 41 32 43 43 39 47 34 52 33 57 36 50 52 53 57 52 43 31 37 50 45 43 37 53 43 41 47 52 42 50 52 47 45 53 45 46 57 41 41 57 50 57 42 53 46 50 57 52 30 52 52 30 47 47 52 39 47 23 46 53 37 57 47 57 53 42 53 50 52 34 33 53 53 50 47 46 34 25 22 30 50 28 47 37 34 34 31 47 37 57 33 33 41 40 40 41 35 21 52 52 40 38 36 37 35 45 35 37 46 57 37 47 17 52 40 34 40 53 29 41 33 40 53 28 40 33 25 44 40 26 33 57 53 44 37 46 21 40 53 37 44 20 39 31 37 40 57 40 27 53 31 24 43 34 22 11 31 30 29 47 34 39 30 48 35 30 29 30 48 27 31 28 39 34 33 22 32 28 41 48 43 17 26 21 44 28 30 31 33 30 24 38 29 39 31 29 28 29 29 29 38 27 29 29 44 27 25 20 29 29 29 26 23 23 29 29 25 29 36 36 29 27 29 27 30 24 29 29 36 22 30 19 31 32 19 10 46 46 31 20 23 30 34 35 51 23 20 13 28 22 30 25 17 16 29 33 38 24 21 16 23 31 29 28 31 35 24 20 26 18 13 27 29 10 29 18 27 24 29 29 20 21 22 32 36 21 9 17 23 29 19 29 25 33 31 21 25 29 29 29 31 31 22 29 17 23 23 18 29 20 24 22 16 17 21 30 19 34 23 19 27 36 16 22 28 30 28 20 22 27 24 19 28 21 23 28 19 19 44 15 14 14 7 30 7 6 6 20 23 16 6 10 9 17 33 26 23 30 16 33 39 12 23 16 21 24 18 20 20 23 8 31 11 31 15 30 16 10 44 14 9 14 28 21 16 11 16 3 10 16 30 18 13 7 26 6 9 21 14 7 4 10 11 17 10 30 20 17 17 13 23 22 21 12 27 7 15 18 11 5 5 18 16 16 21 5 6 6 12 11 11 23 16 23 19 24 13 10 13 18 23 22 19 23 10 16 7 9 4 7 5 11 3 4 6 11 7 5 6 3 5 12 5 6 6 8 8 10 6 7 12 5 5 8 8 16 5 4 3 6 11 4 7 7 20 8 20 14 6 19 7 4 5 17 7 6 7 5 16 24 12 6 3 3 7 5 4 18 6 8 9 11 15 5 4 6 4 1 5 6 3 3 4 12 5 4 2 3 13 19 24 16 7 23 20 20 6 19 6 9 3 4 4 8 14 4 4 3 4 3 7 4 4 9 16 3 8 7 7 19 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_36246342_36247581
seq2: B6Ng01-166L03.b_43_1285

seq1  GAATTCTTTCAAAGGCCCTTTTCATGGTCTCCACAGCAGTGGTCTGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAAAGGCCCTTTTCATGGTCTCCACAGCAGTGGTCTGCAGG  50

seq1  ATTCCTGTCACAGTCACTGCTTTGCTCTAAATGGAGATTGGCCATTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGTCACAGTCACTGCTTTGCTCTAAATGGAGATTGGCCATTGTCA  100

seq1  ACAGAGACCTCATAGGCTGCCCTGTTGCCTTTTTGGAATTTATAATTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACCTCATAGGCTGCCCTGTTGCCTTTTTGGAATTTATAATTTAT  150

seq1  ATTTAGAATCTGTAACCACTTTCTGTGATGCCAGCTCTGCAGCTGACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAATCTGTAACCACTTTCTGTGATGCCAGCTCTGCAGCTGACTTT  200

seq1  TCTTAATGTGTTATACGAGCAAATGTAGATTGTAGCTATAAACACAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGTGTTATACGAGCAAATGTAGATTGTAGCTATAAACACAGTGC  250

seq1  AAGAAAAAGGAAGGCCCATCTGTCTCCTTCAGACTTCATTAGGGAAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAGGAAGGCCCATCTGTCTCCTTCAGACTTCATTAGGGAAGGCT  300

seq1  ATGCCAACAATATTTTTAGTATGGTCTTTCAAATTAAGGTTAAGTTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAACAATATTTTTAGTATGGTCTTTCAAATTAAGGTTAAGTTGCTT  350

seq1  TGAAGCCAGTCAGCCATAGTAGGTTTATTTATTTTGAGGGCCAGCATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCAGTCAGCCATAGTAGGTTTATTTATTTTGAGGGCCAGCATGAA  400

seq1  ACTAATTGAAAATACATCCACTTTCCAAAGACATATCATGTAGCTACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTGAAAATACATCCACTTTCCAAAGACATATCATGTAGCTACCTT  450

seq1  AAAAATGCATTTATTTTTCAGTTGCGTAGGAAATATATTTACAGCACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCATTTATTTTTCAGTTGCGTAGGAAATATATTTACAGCACAGA  500

seq1  GAAATTTCCTTGTCTAGTTTTGGTGATAAAAAATTCCAAAATGGTAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCCTTGTCTAGTTTTGGTGATAAAAAATTCCAAAATGGTAAACA  550

seq1  GTTCCATCACTTGTGTTAATGGTACTAATACAAGTGAGCATTCTGTCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATCACTTGTGTTAATGGTACTAATACAAGTGAGCATTCTGTCAGC  600

seq1  AAAGGCCTTTATGTTCTCAGGATTGCATACATGAAAATATACTATGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCTTTATGTTCTCAGGATTGCATACATGAAAATATACTATGTATT  650

seq1  ATGTTAATCTAAACCTCATAAAAGGGACAAATTGGACTGATCATATTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAATCTAAACCTCATAAAAGGGACAAATTGGACTGATCATATTAAA  700

seq1  AGCGGCTTTCCCCTAAGTATGATTTTAATAATTAATCTGAGTGAGCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCTTTCCCCTAAGTATGATTTTAATAATTAATCTGAGTGAGCATTC  750

seq1  TATCATATCACTGGGCTATTAAGTGGGCAGAATGTAGCAAACTTCCTGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATCACTGGGCTATTAAGTGGGCAGAATGTAGCAAACTTCCTGAG  800

seq1  TTTCTTTTGCTTCCCATTAGCAAGATATAGGCAGAAGGCACAATCAGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGCTTCCCATTAGCAAGATATAGGCAGAAGGCACAATCAGATA  850

seq1  AATAGCCAAATGCCAAACAAATTATACATGTACATCCAATGTGTAATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCAAATGCCAAACAAATTATACATGTACATCCAATGTGTAATTTT  900

seq1  TTTCAGACCACTTTACACCATGTCAAACCTAAGATTGTCAAAGAGTTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGACCACTTTACACCATGTCAAACCTAAGATTGTCAAAGAGTTCAT  950

seq1  ATTATATTATATTATGTCAATATCATATTAATACTTTGTCACATATGTCT  1000
      |||||||||||||||||| |||||||| ||||||||||||||||||||||
seq2  ATTATATTATATTATGTC-ATATCATA-TAATACTTTGTCACATATGTCT  998

seq1  GTAAAGATCTTTATAGCCAGTGGACTTGCAC-TATGTAACAAATAGCAAA  1049
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  GTAAAGATCTTTATAGCCAGT-GACTTGCACTTATGTAACAAATAGCAAA  1047

seq1  CACTGAAATGAATGGAACCACCAACAGGAAAGCAGTCCCCAGGACCAT-C  1098
      ||||| |||||||||||||| | ||||| ||||||| ||||||||||| |
seq2  CACTG-AATGAATGGAACCATC-ACAGG-AAGCAGTTCCCAGGACCATCC  1094

seq1  CTCT---TATAATATGCCAAGACCTGT-GAGCCT-AAGAGCAGAAG-CTC  1142
      ||||   |||||| |||  |||||||| |||||| ||||||||||| |||
seq2  CTCTTTATATAAT-TGC--AGACCTGTGGAGCCTAAAGAGCAGAAGCCTC  1141

seq1  AGGCTGGACTGTGTTGAGCCCAATG-CAAGAGCAACCATAGTCGAGAGGA  1191
      || ||| |||| |||||| | |||| |||||| |  ||||||||| ||||
seq2  AGCCTGAACTGGGTTGAGTCAAATGCCAAGAG-ACACATAGTCGAAAGGA  1190

seq1  AGAGCTGATATCTCTGGTAACCATAAATGGGG---AGAACTAAGAAA--C  1236
      | |||||   ||||||||||||||||  ||||   ||| ||||||||  |
seq2  A-AGCTGGATTCTCTGGTAACCATAATGGGGGGGAAGACCTAAGAAAACC  1239

seq1  AAAT  1240
      ||||
seq2  AAAT  1243

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information