BAC Information

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BAC

Clone NameB6Ng01-166N07
Chromosome10 (Build37)
Map Location 40,869,251 - 40,983,195
singlet/doubletdoublet
Overlap geneA530089I17Rik
Upstream geneBxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, Cdc2l6, LOC666374, Slc22a16, Ddo, 9030224M15Rik, Cdc40, Wasf1, Gpr6
Downstream geneLOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461, 2410017P07Rik, Sesn1, Armc2, 1700016J18Rik, LOC624784, Foxo3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166N07.bB6Ng01-166N07.g
ACCDH958496DH958497
length957723
definitionDH958496|Mus musculus domesticus DNA, BAC clone: B6Ng01-166N07, 5' end.DH958497|Mus musculus domesticus DNA, BAC clone: B6Ng01-166N07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,982,237 - 40,983,195)(40,869,251 - 40,869,974)
sequence
gaattcattcttaactttaactattaccaagttttgtgtgactttgcttc
aggaatggcatacgcattcacatttaatgctgactgagcgtccatggagc
tgcttcttagcgtctggggaaggaaagcacttcatgagttgaactgcatt
tctttgcaatggttggaaacccccgagtctttgatttttgcctcacagtg
ccactcccctcttctgtccccagtggaccaggccgatccctttgcacacg
tggctgctcttcactttgaccagatgctccagaggttcggctcccccatc
atcatcttgaacttagtgaaggtaaggtgtgcttctcggacacactaatg
gcctttctaaagaccaaaggcattggccaactgtgctctgccttccccaa
aaaaaaaaggaaaaggagggaagaagagaccagggcggggtgcaaaggga
gaggaagaatgtgagatgtctgctgtgtttgagctactgttaacttccat
gtcacttcttctgggcttgccttggggaactggtactagatctttctgaa
ggaagagcgtgatttagtctactcggctcctgatttcctcgtgtgaacta
gatctacattaaattccttagtcccacactttaagaagaatgcagatcaa
atgggtacaccctcaccttgctacagcccactcccttgacagtctgtaag
aaccacaaaccggtgtagcaacaggaccaaaaggcttcattcagaaatat
ggtttaagaatcagtgggcttgtgaggagctcaggcaaggtggtgtaatt
gtctctcacctccccatcagagtacactgactagtccgtacaggggtgtg
tcttagtcagggtttctattcctgcatcgacatcatgaccaagaagcaag
gtggggaggaaagggtttattcagctacaatcccgtatgctgttcatcac
cgatgga
gaattctgggggccctgagataagagtctaaaaggttggcaggtctcaaa
catctgggactgaaaacttctggaagtgtctttattcttatggcacggat
ccagcaaaaataacttgatagttgggctcatctgatacaattatgatttg
agcatcacagtgtggctctgccttggagccgaggtatgccacagtacggc
actggcttccagaaagggtccccagagggaaaaatccaaccgaaaatcaa
gtgggtgaccttttatgttccagttttggaaggaagtcatgtattattac
aacggctataaacctctgtcctgtgtaaggaccctaggatgaacagaaat
aatgttaacataaaatttccaatgattaacaaaattataatatcccagtt
aaagccaactcatgctaagtactaatcctcaattattaatgtatatacac
atatgtgcatacaagatgtaataccacatacacacactcatctatctcta
ttatccctatcatctatatatcatctatatcatttatatacacatatgtg
catacaagatgtaatatcacatacacacactcatctatctctattatccc
tatcatctatatatcatcgatatcatttatttacttctgtctgtctgtct
gtctccccccccctctctctctctctctgtgtgtgtgtgtgtgtgtgcgt
gtatatcccaaccacaaacagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_40982237_40983195
seq2: B6Ng01-166N07.b_42_998 (reverse)

seq1  TCCATTGGTGATGAACAGCAATATGGAATTGTAAGCTGAATAAACCCTTT  50
      ||||| ||||||||||||| ||| || ||||| |||||||||||||||||
seq2  TCCATCGGTGATGAACAGC-ATACGGGATTGT-AGCTGAATAAACCCTTT  48

seq1  CCTCCCCACCTTGCTTCTTGGTCATGATGTCGATGCAGGAATAGAAACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCACCTTGCTTCTTGGTCATGATGTCGATGCAGGAATAGAAACCC  98

seq1  TGACTAAGACACA-CCCTGTACGGACTAGTCAGTGTACTCTGATGGGGAG  149
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGACTAAGACACACCCCTGTACGGACTAGTCAGTGTACTCTGATGGGGAG  148

seq1  GTGAGAGACAATTACACCACCTTGCCTGAGCTCCTCACAAGCCCACCTGA  199
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGAGAGACAATTACACCACCTTGCCTGAGCTCCTCACAAGCCCA-CTGA  197

seq1  TTCTTAAACCATATTTCTGAATGAAGCCTTTTGGTCCTGTTGCTACACCG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAACCATATTTCTGAATGAAGCCTTTTGGTCCTGTTGCTACACCG  247

seq1  GTTTGTGGTTCTTACAGACTGTCAAGGGAGTGGGCTGTAGCAAGGTGAGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGGTTCTTACAGACTGTCAAGGGAGTGGGCTGTAGCAAGGTGAGG  297

seq1  GTGTACCCATTTGATCTGCATTCTTCTTAAAGTGTGGGACTAAGGAATTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCCATTTGATCTGCATTCTTCTTAAAGTGTGGGACTAAGGAATTT  347

seq1  AATGTAGATCTAGTTCACACGAGGAAATCAGGAGCCGAGTAGACTAAATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGATCTAGTTCACACGAGGAAATCAGGAGCCGAGTAGACTAAATC  397

seq1  ACGCTCTTCCTTCAGAAAGATCTAGTACCAGTTCCCCAAGGCAAGCCCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCTTCCTTCAGAAAGATCTAGTACCAGTTCCCCAAGGCAAGCCCAG  447

seq1  AAGAAGTGACATGGAAGTTAACAGTAGCTCAAACACAGCAGACATCTCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTGACATGGAAGTTAACAGTAGCTCAAACACAGCAGACATCTCAC  497

seq1  CTTCTTCCTCTCCCTCTGCACCCCGCCCTCGTCTCTTCTTCCCTCCTTTT  549
       |||||||||||||| ||||||||||||| ||||||||||||||||||||
seq2  ATTCTTCCTCTCCCTTTGCACCCCGCCCTGGTCTCTTCTTCCCTCCTTTT  547

seq1  CCCTCTTTTCCTGGGGAAGGCAGAGCACAGTTGGCCAATGCCTTTGGTCT  599
      || | ||||  |||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTTTTTGGGGAAGGCAGAGCACAGTTGGCCAATGCCTTTGGTCT  597

seq1  TTAGAAAGGCCATTAGTGTGTCTGAGAAGCACACCTTACCTTCACTAAGT  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTAGAAAGGCCATTAGTGTGTCCGAGAAGCACACCTTACCTTCACTAAGT  647

seq1  TCAAGATGATGATGGGGGAGCCGAACCTCTGGAGCATCTGGTCAAAGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATGATGATGGGGGAGCCGAACCTCTGGAGCATCTGGTCAAAGTGA  697

seq1  AGAGCAGCCACGTGTGCAAAGGGATCCGCCTGGTCCACTGGGGACAGAAG  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGAGCAGCCACGTGTGCAAAGGGATCGGCCTGGTCCACTGGGGACAGAAG  747

seq1  AGGGGAGTGGCACTGTGAGGCAAAAATCAAAGACTCGGGGGTTTCCAACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTGGCACTGTGAGGCAAAAATCAAAGACTCGGGGGTTTCCAACC  797

seq1  ATTGCAAAGAAATGCAGTTCAACTCATGAAGTGCTTTCCTTCCCCAGACG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAAGAAATGCAGTTCAACTCATGAAGTGCTTTCCTTCCCCAGACG  847

seq1  CTCTGAAGCAGCTCCATGGACGCTCAGTCAGCATTAAATCTGAATGCGTC  899
      ||  ||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  CTAAGAAGCAGCTCCATGGACGCTCAGTCAGCATTAAATGTGAATGCGTA  897

seq1  TGCCATTCCTGAAGCAAAGTAACACACAACTTACTAATAGTTAAAGTTAA  949
      |||||||||||||||||||| ||||| |||||  ||||||||||||||||
seq2  TGCCATTCCTGAAGCAAAGTCACACAAAACTTGGTAATAGTTAAAGTTAA  947

seq1  GAATGAATTC  959
      ||||||||||
seq2  GAATGAATTC  957

seq1: chr10_40869251_40869974
seq2: B6Ng01-166N07.g_66_788

seq1  GAATTCTGGGGGCCCTGAGATAAGAGTCTAAAAGGTTGGCAGGTCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGGCCCTGAGATAAGAGTCTAAAAGGTTGGCAGGTCTCAAA  50

seq1  CATCTGGGACTGAAAACATCTGGAAGTGTCTTTATTCATATGGCAGGGAT  100
      ||||||||||||||||| ||||||||||||||||||| ||||||| ||||
seq2  CATCTGGGACTGAAAACTTCTGGAAGTGTCTTTATTCTTATGGCACGGAT  100

seq1  CCAGCAGAGATAACTTGATAGTTGGGCTCATCTGAGACAATTAGCAGTTG  150
      |||||| | |||||||||||||||||||||||||| |||||||  | |||
seq2  CCAGCAAAAATAACTTGATAGTTGGGCTCATCTGATACAATTATGATTTG  150

seq1  AGCATCACAGTGTGGCTCTGCCTTGGAGCCGAGGTATGCCACAGTACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGCATCACAGTGTGGCTCTGCCTTGGAGCCGAGGTATGCCACAGTACGGC  200

seq1  ACTGGCTTCCAGAAAGGGTCCCCAGAGGGAAAAATCCAACCGAAGATCAA  250
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTGGCTTCCAGAAAGGGTCCCCAGAGGGAAAAATCCAACCGAAAATCAA  250

seq1  GTGGGTGACCTTTTATGTTCCAGTTTTGGAAGGAAGTCATGTATTATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGACCTTTTATGTTCCAGTTTTGGAAGGAAGTCATGTATTATTAC  300

seq1  AGCAGCTATAAACCTCTGTCCTGTGTAAGGACCCTAGTTTTGAACAGAAA  350
      | | |||||||||||||||||||||||||||||||||   ||||||||||
seq2  AACGGCTATAAACCTCTGTCCTGTGTAAGGACCCTAG-GATGAACAGAAA  349

seq1  TAATGTTAACATAGAATTTCCAATGATTAACAAAATTATAATATCCCAGT  400
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAATGTTAACATAAAATTTCCAATGATTAACAAAATTATAATATCCCAGT  399

seq1  TAAAGCCAACTCATGCTAAGTACTAATCCTCAATTATTAATGTATATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCAACTCATGCTAAGTACTAATCCTCAATTATTAATGTATATACA  449

seq1  CATATGTGCATACAAGATGTAATACCACATACACACACTCATCTATCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTGCATACAAGATGTAATACCACATACACACACTCATCTATCTCT  499

seq1  ATTATCCCTATCATCTATATATCATCTATATCATTTATATACACATATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCCTATCATCTATATATCATCTATATCATTTATATACACATATGT  549

seq1  GCATACAAGATGTAATATCACATACACACACTCATCTATCTCTATTATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAAGATGTAATATCACATACACACACTCATCTATCTCTATTATCC  599

seq1  CTATCATCTATATATCATCTATATCATTTATTTACTTCTGTCTGTCTGTC  650
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTATCATCTATATATCATCGATATCATTTATTTACTTCTGTCTGTCTGTC  649

seq1  TGTCTCCCCCCCCCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTG  700
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTCTCCCCCCCCCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGCG  699

seq1  TGTATTTCCCAACAACAAACAGTA  724
      ||||| ||||||| ||||||||||
seq2  TGTATATCCCAACCACAAACAGTA  723