BAC Information

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BAC

Clone NameB6Ng01-167K12
Chromosome10 (Build37)
Map Location 84,454,668 - 84,566,445
singlet/doubletdoublet
Overlap geneRic8b, Fhl4, AI597468
Upstream geneC230099D08Rik, LOC432482, Nuak1, Ckap4, Tcp11l2, Polr3b, Rfx4, EG625690
Downstream geneMterfd3, Cry1, EG666974, Btbd11, EG626858, LOC626878, LOC669723, LOC626940, Pwp1, Prdm4, Ascl4, D10Wsu52e, Bpil2, Fbxo7, Syn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167K12.bB6Ng01-167K12.g
ACCDH959091DH959092
length1,1491,087
definitionDH959091|Mus musculus domesticus DNA, BAC clone: B6Ng01-167K12, 5' end.DH959092|Mus musculus domesticus DNA, BAC clone: B6Ng01-167K12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,454,668 - 84,455,827)(84,565,351 - 84,566,445)
sequence
gaattcctgatacctaaagacagtttcttcatcttcatagcagctaggag
catttgtagatagttctgtttagccactttatgcttaaagcgttcctgcc
atggcggggacccccacctcctctgtgctggtgagtgggtggtgatggta
agtacttagttaggatccctgtctaaaactctattgtgtttttgcagtgg
atagcctgctgaaatacactggctatgggaacgctgcaggactcttggcg
gccaggggcctcttggctggaggaagaggagataattggtactcagagga
cgaggacacggacactgaagaatacaaaaacgcaaaaccaaagtatagta
ctacgtttctgttcgcttaagtagctgtgcctttcagggagtggtttgtc
ttctttctttggctctcattgtccattgcttcctcttgggaatttgtaag
ttttccatctcctggtgtttctagagacagcttcaaacagtcccttagag
taacttcacatgattgaagaagcatgagtctttcaacaagtctgttaccc
tctttcaagaagcaagtgtgtggtgacgattttagatgctgataatcaat
ttgaaagagtgtgttactgtttgcctcataacatacagctgacaccaggt
ttttaagttggttttttgatgtttcagtcattttcagtacccttgcatta
aacctctcgaaagtccaaaagtgttgcaccaaggcacataactccaaaag
gaaaggagctggctctgcactgaattattatcaaacatacatgtgggaac
tcgggttttaacgggtgtttcagtgctctgaaggaacaaacctgaaattc
tgtgatgtctctaagttgggatgtaccaaggaaagacatcgccgtttcct
taaagcagctgcccctctcttccagtcctttccatccttcccctccttct
catcctagcagctcgagatgtcttctcattgctagcagtcattggagctg
aattttactgggtcccgttactgattgctaatattggcgactcattgtga
gcatgttaatgaaactgccgagccttttttactgcctttcttctgagatg
ataatggtcatgaagtaggtaccagatagaaaattcacatctgttaaat
gaattccaatataagacgggcttaagagagacgatccaacttgatcccga
gtggcagctccggggctagactagatgctgcttgtgcatggcaggctcgg
ttttggattgagcttggggtcggcagtgactgcactggcggctgctccag
gactccttcccccctgctccccagtcactccttgacactgccagcgcccc
tcttcattcccacacctgcgggcttagaacaggcgtgggagtggagttcc
cgatttaggaagagcagcgggaatctccgcttggagccaagccctgtgta
cttgaacccaccgggaccgtttatcaacaggtcagaagttaagtggggca
aggaagctgggctcctcctcggatgccccatctcctcctccgcaccagcc
tgacactcaaggcaagaggtcagacccaggcttccagagcgactcccttc
aactgcagacaccgcgtccacaaactcgtggacccactggggtaacccca
tacctccgtacgccccccaacgactcccgcccatccccctcccgttcagt
gtccccccgcaaagggccaggctggagcggccaggccccggggtcgtgca
ggtgaggtgcagatgaggctaacgggaaagggcccggagtgcggccactc
aggccgacgacaccctcccgcccccgccccagccatgggacacactcact
caccgcggggtcgaggccgggagctgcggccgggcggagggagcggtggc
acggagaacagcagaagcggccggggcagcagaggccctgatgcggcccg
ggagtggcttacgcgacctagatgctcttctccggctcagaagtcggaag
actctcggtgcgaggtcggtgcgaggcggcggcggcggcagcggcggctt
ctggctgcggacgtggcgcctgacgcgacccgccccctcgcagcctcagg
agctcccggctctccgcgcctcgggttcgacgcgcacgcgcactcgcgcc
tcggacttcggccccccactccgcgccaccgggtcgctcggcgcggcgca
gtcctcagcagtccccgggcaggcttgcgcgcgcgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_84454668_84455827
seq2: B6Ng01-167K12.b_48_1196

seq1  GAATTCCTGATACCTAAAGACAGTTTCTTCATCTTCATAGCAGCTAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGATACCTAAAGACAGTTTCTTCATCTTCATAGCAGCTAGGAG  50

seq1  CATTTGTAGATAGTTCTGTTTAGCCACTTTATGCTTAAAGCGTTCCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTAGATAGTTCTGTTTAGCCACTTTATGCTTAAAGCGTTCCTGCC  100

seq1  ATGGCGGGGACCCCCACCTCCTCTGTGCTGGTGAGTGGGTGGTGATGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGGGGACCCCCACCTCCTCTGTGCTGGTGAGTGGGTGGTGATGGTA  150

seq1  AGTACTTAGTTAGGATCCCTGTCTAAAACTCTATTGTGTTTTTGCAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTAGTTAGGATCCCTGTCTAAAACTCTATTGTGTTTTTGCAGTGG  200

seq1  ATAGCCTGCTGAAATACACTGGCTATGGGAACGCTGCAGGACTCTTGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTGCTGAAATACACTGGCTATGGGAACGCTGCAGGACTCTTGGCG  250

seq1  GCCAGGGGCCTCTTGGCTGGAGGAAGAGGAGATAATTGGTACTCAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGGCCTCTTGGCTGGAGGAAGAGGAGATAATTGGTACTCAGAGGA  300

seq1  CGAGGACACGGACACTGAAGAATACAAAAACGCAAAACCAAAGTATAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGACACGGACACTGAAGAATACAAAAACGCAAAACCAAAGTATAGTA  350

seq1  CTACGTTTCTGTTCGCTTAAGTAGCTGTGCCTTTCAGGGAGTGGTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGTTTCTGTTCGCTTAAGTAGCTGTGCCTTTCAGGGAGTGGTTTGTC  400

seq1  TTCTTTCTTTGGCTCTCATTGTCCATTGCTTCCTCTTGGGAATTTGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTGGCTCTCATTGTCCATTGCTTCCTCTTGGGAATTTGTAAG  450

seq1  TTTTCCATCTCCTGGTGTTTCTAGAGACAGCTTCAAACAGTCCCTTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATCTCCTGGTGTTTCTAGAGACAGCTTCAAACAGTCCCTTAGAG  500

seq1  TAACTTCACATGATTGAAGAAGCATGAGTCTTTCAACAAGTCTGTTACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCACATGATTGAAGAAGCATGAGTCTTTCAACAAGTCTGTTACCC  550

seq1  TCTTTCAAGAAGCAAGTGTGTGGTGACGATTTTAGATGCTGATAATCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAAGAAGCAAGTGTGTGGTGACGATTTTAGATGCTGATAATCAAT  600

seq1  TTGAAAGAGTGTGTTACTGTTTGCCTCATAACATACAGCTGACACCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAGTGTGTTACTGTTTGCCTCATAACATACAGCTGACACCAGGT  650

seq1  TTTTAAGTTGGTTTTTTGATGTTTCAGTCATTTTCAGTACCCTTGCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTTGGTTTTTTGATGTTTCAGTCATTTTCAGTACCCTTGCATTA  700

seq1  AACCTCTCGAAAGTCCAAAAGTGTTGCACCAAGGCACATAACTCCAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTCGAAAGTCCAAAAGTGTTGCACCAAGGCACATAACTCCAAAAG  750

seq1  GAAAGGAGCTGGCTCTGCACTGAATTATTATCAAACATACATGTGGGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAGCTGGCTCTGCACTGAATTATTATCAAACATACATGTGGGAAC  800

seq1  TCGGGTTTTAACGGGTGTTTCAGTGCCCTGAAGGAACAAACCTGAAATTC  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCGGGTTTTAACGGGTGTTTCAGTGCTCTGAAGGAACAAACCTGAAATTC  850

seq1  TGTGATGTCTCTAAGTTGGGATGTACCAAGGAAAGACATCGCCGTTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTCTCTAAGTTGGGATGTACCAAGGAAAGACATCGCCGTTTCCT  900

seq1  TAAAGCAGCTGCCCCCTCTCTTCCAGTCC-TTCCATCCTTCCCCCTCCTT  949
      ||||||||||| ||||||||||||||||| |||||||||| |||||||||
seq2  TAAAGCAGCTG-CCCCTCTCTTCCAGTCCTTTCCATCCTT-CCCCTCCTT  948

seq1  CTCATCCTAGCCAGCTCGAGATGTCTTCTCATTGCTAGCAGTCATTGGAG  999
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCTAG-CAGCTCGAGATGTCTTCTCATTGCTAGCAGTCATTGGAG  997

seq1  CTGAATTTTTACTGGGTCCCGTTACTGATTGCTAATA-TGGCGACCTTCA  1048
      ||||| ||||||||||||||||||||||||||||||| |||||||  |||
seq2  CTGAA-TTTTACTGGGTCCCGTTACTGATTGCTAATATTGGCGAC--TCA  1044

seq1  TTGTGAGCATTGTTAATGAAACTGCCGAGCTGTTTTTTACTGGCCTTCTT  1098
      ||||||||| ||||||||||||||||||||  |||||||||| | |||||
seq2  TTGTGAGCA-TGTTAATGAAACTGCCGAGC-CTTTTTTACTGCCTTTCTT  1092

seq1  CTAGAGAATGATATGGGTCATGAAGTAGGTAACCAAGAATAGAAAATCAC  1148
      || ||| ||||||  ||||||||||||||| ||||   |||||||||   
seq2  CT-GAG-ATGATAATGGTCATGAAGTAGGT-ACCA--GATAGAAAATTCA  1137

seq1  CATCTGTAAAAT  1160
      ||||||| ||||
seq2  CATCTGTTAAAT  1149

seq1: chr10_84565351_84566445
seq2: B6Ng01-167K12.g_68_1154 (reverse)

seq1  GGCGCGCGCGC-AGGCTGGCCGGGGGCTGCTGGGAGGGCTGCG-CGCGCC  48
      ||||||||||| || ||| |||||| |||||  |||| ||||| ||||||
seq2  GGCGCGCGCGCAAGCCTGCCCGGGGACTGCT--GAGGACTGCGCCGCGCC  48

seq1  GAGCGACCGGTGGGCGCGGGAGGTGGGGGGGCGGAGGGCCGGGGGCGCGA  98
      |||||||| |  |||||||   |||||||| || |  | | | |||||||
seq2  GAGCGACCCGGTGGCGCGG--AGTGGGGGGCCGAA--GTCCGAGGCGCGA  94

seq1  GTGCGCGTGCGCGTCGGAACCCGAGGCGCGGGAGGAGGCGGGAGCTCCGG  148
      ||||||||||||||| |||||||||||||||   ||| |||||||||| |
seq2  GTGCGCGTGCGCGTC-GAACCCGAGGCGCGG--AGAGCCGGGAGCTCCTG  141

seq1  AGGCTGCGGAGGGGGCGGGTCGCGTCAGGCGCCACGTCCGCAGCCAGAAG  198
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGC-GAGGGGGCGGGTCGCGTCAGGCGCCACGTCCGCAGCCAGAAG  190

seq1  CCGCCGCTGCCGCCGCCGCCGCCTCGCACCGACCTCGCACCGAGAGTCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCGCTGCCGCCGCCGCCGCCTCGCACCGACCTCGCACCGAGAGTCTT  240

seq1  CCGACTTCTGAGCCGGAGAAGAGCATCTAGGTCGCGTAAGCCACTCCCGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTTCTGAGCCGGAGAAGAGCATCTAGGTCGCGTAAGCCACTCCCGG  290

seq1  GCCGCATCAGGGCCTCTGCTGCCCCGGCCGCTTCTGCTGTTCTCCGTGCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCATCAGGGCCTCTGCTGCCCCGGCCGCTTCTGCTGTTCTCCGTGCC  340

seq1  ACCGCTCCCTCCGCCCGGCCGCAGCTCCCGGCCTCGACCCCGCGGTGAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTCCCTCCGCCCGGCCGCAGCTCCCGGCCTCGACCCCGCGGTGAGT  390

seq1  GAGTGTGTCCCATGGCTGGGGCGGGGGCGGGAGGGTGTCGTCGGCCTGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTCCCATGGCTGGGGCGGGGGCGGGAGGGTGTCGTCGGCCTGAG  440

seq1  TGGCCGCACTCCGGGCCCTTTCCCGTTAGCCTCATCTGCACCTCACCTGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGCACTCCGGGCCCTTTCCCGTTAGCCTCATCTGCACCTCACCTGC  490

seq1  ACGACCCCGGGGCCTGGCCGCTCCAGCCTGGCCCTTTGCGGGGGGACACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACCCCGGGGCCTGGCCGCTCCAGCCTGGCCCTTTGCGGGGGGACACT  540

seq1  GAACGGGAGGGGGATGGGCGGGAGTCGTTGGGGGGCGTACGGAGGTATGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGGGAGGGGGATGGGCGGGAGTCGTTGGGGGGCGTACGGAGGTATGG  590

seq1  GGTTACCCCAGTGGGTCCACGAGTTTGTGGACGCGGTGTCTGCAGTTGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACCCCAGTGGGTCCACGAGTTTGTGGACGCGGTGTCTGCAGTTGAA  640

seq1  GGGAGTCGCTCTGGAAGCCTGGGTCTGACCTCTTGCCTTGAGTGTCAGGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCGCTCTGGAAGCCTGGGTCTGACCTCTTGCCTTGAGTGTCAGGC  690

seq1  TGGTGCGGAGGAGGAGATGGGGCATCCGAGGAGGAGCCCAGCTTCCTTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCGGAGGAGGAGATGGGGCATCCGAGGAGGAGCCCAGCTTCCTTGC  740

seq1  CCCACTTAACTTCTGACCTGTTGATAAACGGTCCCGGTGGGTTCAAGTAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTAACTTCTGACCTGTTGATAAACGGTCCCGGTGGGTTCAAGTAC  790

seq1  ACAGGGCTTGGCTCCAAGCGGAGATTCCCGCTGCTCTTCCTAAATCGGGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGCTTGGCTCCAAGCGGAGATTCCCGCTGCTCTTCCTAAATCGGGA  840

seq1  ACTCCACTCCCACGCCTGTTCTAAGCCCGCAGGTGTGGGAATGAAGAGGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACTCCCACGCCTGTTCTAAGCCCGCAGGTGTGGGAATGAAGAGGG  890

seq1  GCGCTGGCAGTGTCAAGGAGTGACTGGGGAGCAGGGGGGAAGGAGTCCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTGGCAGTGTCAAGGAGTGACTGGGGAGCAGGGGGGAAGGAGTCCTG  940

seq1  GAGCAGCCGCCAGTGCAGTCACTGCCGACCCCAAGCTCAATCCAAAACCG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCGCCAGTGCAGTCACTGCCGACCCCAAGCTCAATCCAAAACCG  990

seq1  AGCCTGCCATGCACAAGCAGCATCTAGTCTAGCCCCGGAGCTGCCACTCG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCCATGCACAAGCAGCATCTAGTCTAGCCCCGGAGCTGCCACTCG  1040

seq1  GGATCAAGTTGGATCGTCTCTCTTAAGCCCGTCTTATATTGGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAGTTGGATCGTCTCTCTTAAGCCCGTCTTATATTGGAATTC  1087