BAC Information

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BAC

Clone NameB6Ng01-167O17
Chromosome10 (Build37)
Map Location 16,603,914 - 16,729,934
singlet/doubletdoublet
Overlap geneLOC100039576
Upstream geneLOC382457, LOC546472
Downstream geneLOC627511, Cited2, Txlnb, LOC665321, Heca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167O17.bB6Ng01-167O17.g
ACCDH959293DH959294
length1,1121,092
definitionDH959293|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O17, 5' end.DH959294|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,728,819 - 16,729,934)(16,603,914 - 16,605,016)
sequence
gaattctgtggtaatgagtcggtgacaatctaagaaaaagaggcgtaata
ttctgaaaaataatttcaactggaattaaagactgcaaggaaggaaagaa
ggaagggaggaaggaaatgatagcaatagcagtgcagaaacaggaggagg
gggaaggagaaagaaaagacaagagaacagagggtggaactattttcatt
tttaaagtatttattttattttaattatgtgttcatgtatccgtgtactg
ctcttaggtatatggttatgaaagtgcaggtacctagagtgtccagaaaa
ggccatctgataacatggagttggagtgacaggtggttgtgacccaccat
atatggacttttaattgctcagtaggtatgcagtagtatgtgctctagtt
acttttctgttgctgtgacaaaagaccatgagcataaaaacacttacaga
ggaaaactttattttggcttatgagtccagagagaaaattcataaccgtg
agcaatgaatggccgctgacatccagagcagaaagatgtgcgcacacaca
cacaagcacacacacacaaacacacacacacactaacagagagagattgg
tggctaggatgaggttatgaactctcaaagccctttccactgggatacgt
catccaccatggctccaaatctccaaccttccataacctcctcatacagc
atgacaactgggcaccaagtattcaaaaccatgagctcatttggaacttt
ttttttttttcttttgccaaatgaagtactgtgatcaagaggtaaactct
actgaggtgtgtgttcatttgcatctttgaacttaggtgcgcttgtgtat
tttcttacctttcccagggagatgctctattattctgtaaatgaaggaac
cttaagactttctacaagatttccttgtatctgaatcttttcctctaagt
tcagtgcctcctaaataggttttattcccgccccaccccccgcccgtccc
atgaatggacatgcccaatatgtgcaatatccattttaaatgtaccaaac
tggcactggaagggattgcaggaaatgattggcagtcctagggaggattg
tgtcactgcatt
gaattcaggaattataaacatgtgccatcatgcctagctgctccttcctt
ccttcattcgttcactcactcactcgttttttaatacttaggactgaatg
tagagtgttataaatactgagtaagtatactcagtaagcactctgaatct
gaggagtcgcagcagccctctcttggcttcttatcttgacaagtctcaca
aagctgcccagactagatttatcgtgtaactcccctaaccatggatctca
gaaagctaagatttacagatctgtgccatcagggattgatcttcttttgt
ttggtatgggtggatgctcaaatgcactgggaaatatttttcctttgtcc
attttaataagactaatagagcaagattttctatgtatttgtatcactgg
catccccaatcaacatttgtcctatggaaaagcacgtatgtaatcgctat
ttatttttacgcttttaacagttggcctagtagatatatacagtgcatcc
atccccattcgttttctctttttgttatcacagagcccatttctttttcc
tttatcataaagattaagaataccttaaccagttagttctgtgtgggata
agaataaagagaaccctcctttcatccatcatttggaaaatttttaccaa
atgtttaaatagtagtagatgaaaagagtgtaatatagactgtgagggtc
aagaaatacaaaattaatgaataaattgttgatcctgactacatatttat
gtttttaaggcgacttaactgacttttctgccccaaccctctaggatgga
aatgaaagtgtcccaaaactagagtcttcccttctctcctgatctccttt
ctctttccattataagaaatctattgaagataatgcctatactgaatatt
cattaattttcaaagtcccgttgtttgccagtttagatttaaatgatgtt
ccattatgctgtgagcagatttcatggcttctctaatcaaattagctcat
tttctaacacaatattttttataaggaacatgccgaagccattgtgactc
agtttcatcctgctttttttaaaaaaatgagctgccggttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16728819_16729934
seq2: B6Ng01-167O17.b_50_1161 (reverse)

seq1  AATGCAGTGACACAATCCTCCCTAGGACTGCCAATCATTTTCCTGCAATC  50
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATGCAGTGACACAATCCTCCCTAGGACTGCCAATCA-TTTCCTGCAATC  49

seq1  CCTTCCCAGTTGCCAAGTTTGGTACATTTAAAATGAATATTGCACATTAT  100
      |||| |||| |||| |||||||||||||||||||| |||||||||| |||
seq2  CCTT-CCAG-TGCC-AGTTTGGTACATTTAAAATGGATATTGCACA-TAT  95

seq1  TGGGCATTGTCCATTCATGGGGACGGGC-GGGGGTGGGGCGGGAATAAAA  149
      |||||| ||||||||||| ||||||||| |||||||||||||||||||||
seq2  TGGGCA-TGTCCATTCAT-GGGACGGGCGGGGGGTGGGGCGGGAATAAAA  143

seq1  CCTATTTAGGAGGCACTGAACTTAGA-GAAAAGATTCAGATACAAGGAAA  198
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTATTTAGGAGGCACTGAACTTAGAGGAAAAGATTCAGATACAAGGAAA  193

seq1  TCTTGTAGAAAGTCTTAAGGTTCCTTCATTTACAGAATAATAGAGCATCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAGAAAGTCTTAAGGTTCCTTCATTTACAGAATAATAGAGCATCT  243

seq1  CCCTGGGAAAGGTAAGAAAATACACAAGCGCACCTAAGTTCAAAGATGCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGAAAGGTAAGAAAATACACAAGCGCACCTAAGTTCAAAGATGCA  293

seq1  AATGAACACACACCTCAGTAGAGTTTACCTCTTGATCACAGTACTTCATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACACACACCTCAGTAGAGTTTACCTCTTGATCACAGTACTTCATT  343

seq1  TGGCAAAAG-AAAAAAAAAAAAGTTCCAAATGAGCTCATGGTTTTGAATA  397
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAAGAAAAAAAAAAAAAGTTCCAAATGAGCTCATGGTTTTGAATA  393

seq1  CTTGGTGCCCAGTTGTCATGCTGTATGAGGAGGTTATGGAAGGTTGGAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGCCCAGTTGTCATGCTGTATGAGGAGGTTATGGAAGGTTGGAGA  443

seq1  TTTGGAGCCATGGTGGATGACGTATCCCAGTGGAAAGGGCTTTGAGAGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGCCATGGTGGATGACGTATCCCAGTGGAAAGGGCTTTGAGAGTT  493

seq1  CATAACCTCATCCTAGCCACCAATCTCTCTCTGTTAGTGTGTGTGTGTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCTCATCCTAGCCACCAATCTCTCTCTGTTAGTGTGTGTGTGTGT  543

seq1  TTGTGTGTGTGTGCTTGTGTGTGTGTGCGCACATCTTTCTGCTCTGGATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTGTGTGCTTGTGTGTGTGTGCGCACATCTTTCTGCTCTGGATG  593

seq1  TCAGCGGCCATTCATTGCTCACGGTTATGAATTTTCTCTCTGGACTCATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCGGCCATTCATTGCTCACGGTTATGAATTTTCTCTCTGGACTCATA  643

seq1  AGCCAAAATAAAGTTTTCCTCTGTAAGTGTTTTTATGCTCATGGTCTTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAATAAAGTTTTCCTCTGTAAGTGTTTTTATGCTCATGGTCTTTT  693

seq1  GTCACAGCAACAGAAAAGTAACTAGAGCACATACTACTGCATACCTACTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGCAACAGAAAAGTAACTAGAGCACATACTACTGCATACCTACTG  743

seq1  AGCAATTAAAAGTCCATATATGGTGGGTCACAACCACCTGTCACTCCAAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTAAAAGTCCATATATGGTGGGTCACAACCACCTGTCACTCCAAC  793

seq1  TCCATGTTATCAGATGGCCTTTTCTGGACACTCTAGGTACCTGCACTTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTTATCAGATGGCCTTTTCTGGACACTCTAGGTACCTGCACTTTC  843

seq1  ATAACCATATACCTAAGAGCAGTACACGGATACATGAACACATAATTAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCATATACCTAAGAGCAGTACACGGATACATGAACACATAATTAAA  893

seq1  ATAAAATAAATACTTTAAAAATGAAAATAGTTCCACCCTCTGTTCTCTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAATACTTTAAAAATGAAAATAGTTCCACCCTCTGTTCTCTTG  943

seq1  TCTTTTCTTTCTCCTTCCCCCTCCTCCTGTTTCTGCACTGCTATTGCTAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTTTCTCCTTCCCCCTCCTCCTGTTTCTGCACTGCTATTGCTAT  993

seq1  CATTTCCTTCCTCCCTTCCTTCTTTCCTTCCTTGCAGTCTTTAATTCCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTTCCTCCCTTCCTTCTTTCCTTCCTTGCAGTCTTTAATTCCAG  1043

seq1  TTGAAATTATTTTTCAGAATATTACGCCTCTTTTTCTTAGATTGTCACCG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTATTTTTCAGAATATTACGCCTCTTTTTCTTAGATTGTCACCG  1093

seq1  ACTCATTACCACAGAATTC  1116
      |||||||||||||||||||
seq2  ACTCATTACCACAGAATTC  1112

seq1: chr10_16603914_16605016
seq2: B6Ng01-167O17.g_68_1159

seq1  GAATTCAGGAATTATAAACATGTGCCATCATGCCTAGCTGCTCCTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAATTATAAACATGTGCCATCATGCCTAGCTGCTCCTTCCTT  50

seq1  CCTTCATTCGTTCACTCACTCACTCGTTTTTTAATACTTAGGACTGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATTCGTTCACTCACTCACTCGTTTTTTAATACTTAGGACTGAATG  100

seq1  TAGAGTGTTATAAATACTGAGTAAGTATACTCAGTAAGCACTCTGAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGTTATAAATACTGAGTAAGTATACTCAGTAAGCACTCTGAATCT  150

seq1  GAGGAGTCGCAGCAGCCCTCTCTTGGCTTCTTATCTTGACAAGTCTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTCGCAGCAGCCCTCTCTTGGCTTCTTATCTTGACAAGTCTCACA  200

seq1  AAGCTGCCCAGACTAGATTTATCGTGTAACTCCCCTAACCATGGATCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCCAGACTAGATTTATCGTGTAACTCCCCTAACCATGGATCTCA  250

seq1  GAAAGCTAAGATTTACAGATCTGTGCCATCAGGGATTGATCTTCTTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTAAGATTTACAGATCTGTGCCATCAGGGATTGATCTTCTTTTGT  300

seq1  TTGGTATGGGTGGATGCTCAAATGCACTGGGAAATATTTTTCCTTTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATGGGTGGATGCTCAAATGCACTGGGAAATATTTTTCCTTTGTCC  350

seq1  ATTTTAATAAGACTAATAGAGCAAGATTTTCTATGTATTTGTATCACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATAAGACTAATAGAGCAAGATTTTCTATGTATTTGTATCACTGG  400

seq1  CATCCCCAATCAACATTTGTCCTATGGAAAAGCACGTATGTAATCGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCAATCAACATTTGTCCTATGGAAAAGCACGTATGTAATCGCTAT  450

seq1  TTATTTTTACGCTTTTAACAGTTGGCCTAGTAGATATATACAGTGCATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTACGCTTTTAACAGTTGGCCTAGTAGATATATACAGTGCATCC  500

seq1  ATCCCCATTCGTTTTCTCTTTTTGTTATCACAGAGCCCATTTCTTTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCATTCGTTTTCTCTTTTTGTTATCACAGAGCCCATTTCTTTTTCC  550

seq1  TTTATCATAAAGATTAAGAATACCTTAACCAGTTAGTTCTGTGTGGGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCATAAAGATTAAGAATACCTTAACCAGTTAGTTCTGTGTGGGATA  600

seq1  AGAATAAAGAGAACCCTCCTTTCATCCATCATTTGGAAAATTTTTACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAGAGAACCCTCCTTTCATCCATCATTTGGAAAATTTTTACCAA  650

seq1  ATGTTTAAATAGTAGTAGATGAAAAGAGTGTAATATAGACTGTGAGGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAATAGTAGTAGATGAAAAGAGTGTAATATAGACTGTGAGGGTC  700

seq1  AAGAAATACAAAATTAATGAATAAATTGTTGATCCTGACTACATATTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATACAAAATTAATGAATAAATTGTTGATCCTGACTACATATTTAT  750

seq1  GTTTTTAAGGCGACTTAACTGACTTTTCTGCCCCAACCCTCTAGGATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAGGCGACTTAACTGACTTTTCTGCCCCAACCCTCTAGGATGGA  800

seq1  AATGAAAGTGTCCCAAAACTAGAGTCTTCCCTTCTCTCCTGATCTCCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGTGTCCCAAAACTAGAGTCTTCCCTTCTCTCCTGATCTCCTTT  850

seq1  CTCTTTCCATTATAAGAAATCTATTGAAGATAATGCCTATACTGAATATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCATTATAAGAAATCTATTGAAGATAATGCCTATACTGAATATT  900

seq1  CATTAATTTTCAAAGTCCCGGTGTTTTGCCAGTTTAGATTTAAATGATGT  950
      |||||||||||||||||||| || ||||||||||||||||||||||||||
seq2  CATTAATTTTCAAAGTCCCGTTG-TTTGCCAGTTTAGATTTAAATGATGT  949

seq1  TCCATTATGCTGTTGAGCAGATTTCATGGC-TCTCTAATCAAATTAGCTC  999
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  TCCATTATGCTG-TGAGCAGATTTCATGGCTTCTCTAATCAAATTAGCTC  998

seq1  ATTTCTAAACACAAATATTTTTTATAAGGAACATGCCCAAAGCAATTGTG  1049
      ||||   ||||| |||||||||||||||||||||| || |||| ||||||
seq2  ATTTTCTAACAC-AATATTTTTTATAAGGAACATG-CCGAAGCCATTGTG  1046

seq1  ACTCAGTTTTCATCCTGCTTTTTTTTAAAAAAAAAAAATTGAGCTGCAGG  1099
      |||||| ||||||||||||||||||       |||||| |||||||| ||
seq2  ACTCAG-TTTCATCCTGCTTTTTTT-------AAAAAAATGAGCTGCCGG  1088

seq1  TTAT  1103
      ||||
seq2  TTAT  1092