BAC Information

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BAC

Clone NameB6Ng01-168B23
Chromosome10 (Build37)
Map Location 8,113,956 - 8,240,174
singlet/doubletdoublet
Overlap geneUst
Upstream geneLOC626333, LOC666541, 9230019H11Rik, LOC100041405, LOC672213, Lrp11, Pcmt1, Nup43, Lats1, Katna1, BC013529, Ppil4, LOC665035, Zc3h12d, Map3k7ip2, LOC100039046
Downstream geneSash1, LOC100039173, EG666625, LOC666636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168B23.bB6Ng01-168B23.g
ACCDH959445DH959446
length1,1101,106
definitionDH959445|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B23, 5' end.DH959446|Mus musculus domesticus DNA, BAC clone: B6Ng01-168B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,239,046 - 8,240,174)(8,113,956 - 8,115,073)
sequence
gaattcttgctcccaggatcccatttctcaattttctgtggaataatctc
tggatggataatgttttaaaagttttcaggagaacagtcgtggagctatg
aggctcttaactgccccacatctcctgattactggactatttagaatgat
ttggggatcagagttgagaggcatcggaattgtgtggcctgagctaaatg
ctgttttctaatcccagggaaaccatgaagaaatctgcccagtgtcatgc
tgcagtggttaatatatctgtcttgttcacagtcctacctacctgcttat
gtcactaaatgtcacttctgtttccaacttaactcagcttggaaaagaaa
aacattattggagaactgtctccaacagattgtttttttgctcctgtctg
gggagcattttcttgattgctaattgatgtaggggggccaggccacagca
ggcagagagccgttcctaagcaggtggccctggacagtacaagaaagacg
gcggaaggtgaacctagaacccgcgtaagcacatttctccagtttctgct
ccagttcctgtctctaggttcctcctgcctcaccttccctccacaatgga
ctgtaactggtaagccaaacaaattctttttttcctccatgttattttgg
gtcatgatgtttatcacagcaacagaaaaacaatctaggacactggaatc
acaatgtaactcttaggccatatcacttgtgtatctggtgatttgtaaaa
acaaaaacgattaagtgtgtttgatagagcagccctgttctcggataggt
ctctgggaagctccgtgggctctttcagttctagaaacttcccagcggtg
ggaagagagatggtgaaacaggtctgtgaaggcacagagcccttctcctt
ttatatctgctgtaaggtcttcctccagtcagtggagtacccttgttttc
agtgagtgctgtagacgagggagggcaagaaaaagcgcctctgatctgag
ccaggcgtgagctatgctgctctgcgaaccacccacctctgctttacgtc
cggctagtctgaacccattatcccaggcacattttatatcggcttgtagg
tgggtcgctt
gaattctggacaggttaaagaagagaggaaggctaagtacgacatgcttg
cttgacaccacattcatgggcctctctctaaatcccaccgtacacttgcc
aacttcaggatggagtcatctctgaaagcccataagagaaaccttgcaaa
tgggttccctctcagtatgtgggagttacagcttaaacggtcagctgagc
tcattacccccagagtctcccgtgccctgtgttatcagggtttctctcct
tataaactcttttcagcaatgattaattttagaacacttgggtgagggct
gacactgggaaccaggagggcaaggatctggactcgtggctgtttgctat
gttatcccaatgctatcaccaccagtgatgagagccatggtgatctctat
tggcagaactaacaggctaatcacaagagggccactgacacttgatatga
aaagatgatatgaggcttgatatagaagatcagatatatgcagtgagcag
attaaacattcttttgtagcagggtgtaatgtcaaaagaatatcattcta
ctcagatggcaatactctacatcctcaaaggtttcctcagtgtgcgcctg
caaacaaaagaagctcgcgccttataaggaaaacatgaggttattgctgt
cctatggaaaccctgagaacaatgtctgcatacagtcggcacctaatatg
tcttcactagcaatactaattgcctttctagggcaggagccgtctcagtg
catccccatcttctcaggtctgccatcccttgctgcacactccacttgct
cacagaggtttgaaaggaccgagatgcgatgccaggctccagccgttgca
gctctgatttaattattctggaaaaagtcccaggccgttggtattcttaa
aaaagttccttaggtaattctaatgtctagccaggcctgagaaccactga
gctatacacaataatatattttatactcagccaatccaattttctagacg
caaaaagatggtatcctttcagctcatctaatcaggggtcaccttcatca
tggtgaggagtgatttcagcacagttccacctccagggggacgcgaccaa
acaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_8239046_8240174
seq2: B6Ng01-168B23.b_42_1151 (reverse)

seq1  AAGCGACCCACCTACCAAAAGCCGATATAAAATGTG-CTGGGAT-ATGGG  48
      |||||||||||||||   |||||||||||||||||| ||||||| |||||
seq2  AAGCGACCCACCTAC---AAGCCGATATAAAATGTGCCTGGGATAATGGG  47

seq1  TTCAAGACCTAGCCGGGACGGTAAAAGGCAAGAGGTGGGTGGTTTCGGCA  98
      ||| ||| |||||| |||| |||||  || ||||||||||||||   |||
seq2  TTC-AGA-CTAGCC-GGAC-GTAAA--GC-AGAGGTGGGTGGTT--CGCA  88

seq1  GAGCCAGGCATAGCTCACGCCCTTGGCTCAGAATCAGAGGGCGCTTTTTT  148
      ||||   ||||||||||||||  |||||||| |||||| ||||| |||||
seq2  GAGC--AGCATAGCTCACGCC--TGGCTCAG-ATCAGA-GGCGC-TTTTT  131

seq1  CTTGCCCTCCCTCGTCTTACAAGCACTCCACTGAAAACAAGGGTACTCCA  198
      |||||||||||||||| ||| |||||| ||||||||||||||||||||||
seq2  CTTGCCCTCCCTCGTC-TAC-AGCACT-CACTGAAAACAAGGGTACTCCA  178

seq1  CTGACTGGAGGAAGACCTTACAGCAGATATAAAAGGAGAA-GGCTCTGTG  247
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTGACTGGAGGAAGACCTTACAGCAGATATAAAAGGAGAAGGGCTCTGTG  228

seq1  CCTTCACAGACCTGTTTCACCATCTCTCTTCCCACCGCTGGGAAGTTTCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACAGACCTGTTTCACCATCTCTCTTCCCACCGCTGGGAAGTTTCT  278

seq1  AGAACTGAAAGAGCCCACGGAGCTTCCCAGAGACCTATCCGAGAACAGGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGAAAGAGCCCACGGAGCTTCCCAGAGACCTATCCGAGAACAGGG  328

seq1  CTGCTCTATCAAACACACTTAATCGTTTTTGTTTTTACAAATCACCAGAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTATCAAACACACTTAATCGTTTTTGTTTTTACAAATCACCAGAT  378

seq1  ACACAAGTGATATGGCCTAAGAGTTACATTGTGATTCCAGTGTCCTAGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGTGATATGGCCTAAGAGTTACATTGTGATTCCAGTGTCCTAGAT  428

seq1  TGTTTTTCTGTTGCTGTGATAAACATCATGACCCAAAATAACATGGAGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTGTTGCTGTGATAAACATCATGACCCAAAATAACATGGAGGA  478

seq1  AAAAAAGAATTTGTTTGGCTTACCAGTTACAGTCCATTGTGGAGGGAAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAATTTGTTTGGCTTACCAGTTACAGTCCATTGTGGAGGGAAGG  528

seq1  TGAGGCAGGAGGAACCTAGAGACAGGAACTGGAGCAGAAACTGGAGAAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGAGGAACCTAGAGACAGGAACTGGAGCAGAAACTGGAGAAAT  578

seq1  GTGCTTACGCGGGTTCTAGGTTCACCTTCCGCCGTCTTTCTTGTACTGTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTACGCGGGTTCTAGGTTCACCTTCCGCCGTCTTTCTTGTACTGTC  628

seq1  CAGGGCCACCTGCTTAGGAACGGCTCTCTGCCTGCTGTGGCCTGGCCCCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCACCTGCTTAGGAACGGCTCTCTGCCTGCTGTGGCCTGGCCCCC  678

seq1  CTACATCAATTAGCAATCAAGAAAATGCTCCCCAGACAGGAGCAAAAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCAATTAGCAATCAAGAAAATGCTCCCCAGACAGGAGCAAAAAAA  728

seq1  CAATCTGTTGGAGACAGTTCTCCAATAATGTTTTTCTTTTCCAAGCTGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGTTGGAGACAGTTCTCCAATAATGTTTTTCTTTTCCAAGCTGAG  778

seq1  TTAAGTTGGAAACAGAAGTGACATTTAGTGACATAAGCAGGTAGGTAGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTGGAAACAGAAGTGACATTTAGTGACATAAGCAGGTAGGTAGGA  828

seq1  CTGTGAACAAGACAGATATATTAACCACTGCAGCATGACACTGGGCAGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAACAAGACAGATATATTAACCACTGCAGCATGACACTGGGCAGAT  878

seq1  TTCTTCATGGTTTCCCTGGGATTAGAAAACAGCATTTAGCTCAGGCCACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATGGTTTCCCTGGGATTAGAAAACAGCATTTAGCTCAGGCCACA  928

seq1  CAATTCCGATGCCTCTCAACTCTGATCCCCAAATCATTCTAAATAGTCCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCGATGCCTCTCAACTCTGATCCCCAAATCATTCTAAATAGTCCA  978

seq1  GTAATCAGGAGATGTGGGGCAGTTAAGAGCCTCATAGCTCCACGACTGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCAGGAGATGTGGGGCAGTTAAGAGCCTCATAGCTCCACGACTGTT  1028

seq1  CTCCTGAAAACTTTTAAAACATTATCCATCCAGAGATTATTCCACAGAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAAAACTTTTAAAACATTATCCATCCAGAGATTATTCCACAGAAA  1078

seq1  ATTGAGAAATGGGATCCTGGGAGCAAGAATTC  1129
      ||||||||||||||||||||||||||||||||
seq2  ATTGAGAAATGGGATCCTGGGAGCAAGAATTC  1110

seq1: chr10_8113956_8115073
seq2: B6Ng01-168B23.g_69_1174

seq1  GAATTCTGGACAGGTTAAAGAAGAGAGGAAGGCTAAGTACGACATGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGACAGGTTAAAGAAGAGAGGAAGGCTAAGTACGACATGCTTG  50

seq1  CTTGACACCACATTCATGGGCCTCTCTCTAAATCCCACCGTACACTTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACACCACATTCATGGGCCTCTCTCTAAATCCCACCGTACACTTGCC  100

seq1  AACTTCAGGATGGAGTCATCTCTGAAAGCCCATAAGAGAAACCTTGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCAGGATGGAGTCATCTCTGAAAGCCCATAAGAGAAACCTTGCAAA  150

seq1  TGGGTTCCCTCTCAGTATGTGGGAGTTACAGCTTAAACGGTCAGCTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCCCTCTCAGTATGTGGGAGTTACAGCTTAAACGGTCAGCTGAGC  200

seq1  TCATTACCCCCAGAGTCTCCCGTGCCCTGTGTTATCAGGGTTTCTCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACCCCCAGAGTCTCCCGTGCCCTGTGTTATCAGGGTTTCTCTCCT  250

seq1  TATAAACTCTTTTCAGCAATGATTAATTTTAGAACACTTGGGTGAGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTCTTTTCAGCAATGATTAATTTTAGAACACTTGGGTGAGGGCT  300

seq1  GACACTGGGAACCAGGAGGGCAAGGATCTGGACTCGTGGCTGTTTGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGGGAACCAGGAGGGCAAGGATCTGGACTCGTGGCTGTTTGCTAT  350

seq1  GTTATCCCAATGCTATCACCACCAGTGATGAGAGCCATGGTGATCTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCCAATGCTATCACCACCAGTGATGAGAGCCATGGTGATCTCTAT  400

seq1  TGGCAGAACTAACAGGCTAATCACAAGAGGGCCACTGACACTTGATATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAACTAACAGGCTAATCACAAGAGGGCCACTGACACTTGATATGA  450

seq1  AAAGATGATATGAGGCTTGATATAGAAGATCAGATATATGCAGTGAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGATATGAGGCTTGATATAGAAGATCAGATATATGCAGTGAGCAG  500

seq1  ATTAAACATTCTTTTGTAGCAGGGTGTAATGTCAAAAGAATATCATTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACATTCTTTTGTAGCAGGGTGTAATGTCAAAAGAATATCATTCTA  550

seq1  CTCAGATGGCAATACTCTACATCCTCAAAGGTTTCCTCAGTGTGCGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATGGCAATACTCTACATCCTCAAAGGTTTCCTCAGTGTGCGCCTG  600

seq1  CAAACAAAAGAAGCTCGCGCCTTATAAGGAAAACATGAGGTTATTGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAGAAGCTCGCGCCTTATAAGGAAAACATGAGGTTATTGCTGT  650

seq1  CCTATGGAAACCCTGAGAACAATGTCTGCATACAGTCGGCACCTAATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGAAACCCTGAGAACAATGTCTGCATACAGTCGGCACCTAATATG  700

seq1  TCTTCACTAGCAATACTAATTGCCTTTCTAGGGCAGGAGCCGTCTCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACTAGCAATACTAATTGCCTTTCTAGGGCAGGAGCCGTCTCAGTG  750

seq1  CATCCCCATCTTCTCAGGTCTGCCATCCCTTGCTGCACACTCCACTTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCATCTTCTCAGGTCTGCCATCCCTTGCTGCACACTCCACTTGCT  800

seq1  CACAGAGGTTTG-AAGGACCGAGATGCGATGCCAGGCTCCAGCCGTTGCA  849
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGTTTGAAAGGACCGAGATGCGATGCCAGGCTCCAGCCGTTGCA  850

seq1  GCTCTGATTTAATTATTCTGGAAAAAGTCCCAGGCCGTTGGTATTCTTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGATTTAATTATTCTGGAAAAAGTCCCAGGCCGTTGGTATTCTTAA  900

seq1  AAAAGTTCCTTAGGTAATTCTAATGTCTAGCCAGGCCTGAGAACCACTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCCTTAGGTAATTCTAATGTCTAGCCAGGCCTGAGAACCACTGA  950

seq1  GCTATAACACAAATAATATATTTTATAACTCAGGCCAAATCCAATTTTCT  999
      ||||| |||| ||||||||||||||| ||||||  | |||||||||||||
seq2  GCTAT-ACAC-AATAATATATTTTAT-ACTCAG--CCAATCCAATTTTCT  995

seq1  AGACGCAAAAAAGGATGGTATCCTTTCCAGGCTCATCTTAATCAGGGGTC  1049
      |||||||||||  ||||||||||||||   ||||||| ||||||||||||
seq2  AGACGCAAAAA--GATGGTATCCTTTC--AGCTCATC-TAATCAGGGGTC  1040

seq1  ACCTTCATCATGGTGAGGAGTGATTTCAGCACAAGTGTCAACTCCAAGGG  1099
      |||||||||||||||||||||||||||||||| |||  || |||| ||||
seq2  ACCTTCATCATGGTGAGGAGTGATTTCAGCAC-AGTTCCACCTCC-AGGG  1088

seq1  GGACGCTGACCAAACAAGC  1118
      |||||| ||||||||||||
seq2  GGACGC-GACCAAACAAGC  1106