BAC Information

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BAC

Clone NameB6Ng01-168E15
Chromosome10 (Build37)
Map Location 68,902,162 - 69,029,345
singlet/doubletdoublet
Overlap geneAnk3
Upstream gene1700040L02Rik, EG665342, Tmem26, A930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371
Downstream geneLOC100039734, 5730416O20Rik, Ccdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168E15.bB6Ng01-168E15.g
ACCDH959565DH959566
length1,113727
definitionDH959565|Mus musculus domesticus DNA, BAC clone: B6Ng01-168E15, 5' end.DH959566|Mus musculus domesticus DNA, BAC clone: B6Ng01-168E15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,028,225 - 69,029,345)(68,902,162 - 68,902,901)
sequence
gaattctttttctttaatgtgtaggtgtgtttgcatatatggaggtggga
gggggcacccacagctgatattaggaatctttttcacttttttgaacctt
ctttgaggcaggctctctcagtcaaaccagagtgagctgacatcactaac
cttgctagtcagctgcaagcatcagcagacaataaaatatacctatagta
acttcctgtcccggccgccatcggagagcagcagccatggtcctgcgcta
ccccatggccgtgggcctcaacaagggccacaaggtgacaaacaatgtca
gcaagccaagacacagccggcgccacgggagcctcaccaagcacaccaag
ttcgtgcgggacatgatccgggaggtgtgcagcttcgcaccttataagtg
gcgcaccatggagttgctcaaagtctccaaggacaagtgcgcactcagtt
cgtcaagaagagggtgggcatgcacagctgcgccaagagaaagcgggagg
agctgagcaacatgctagcagccatgaggaaggtggcagccaagaaggat
tgatgaacactcccccagtaaatgattgttcctactaaatatataaacat
atatatttaagttaaaaaataaacacatgttgtagatatctattgccagg
tgccaagtaaccaacaccggctgttgagatgggtccatctgtaaggatgc
ttgctgccatggcaactatctaagttggatcttggggacccacatagtag
aagtagagaagtgtctactgcaaactgtccacatggtaccatgatgtgtg
tacgcatgtatgcgtgtgtgcactcatatgtatacaaaagtgatcttaaa
ttattttaaagctaaagaatagatgaagaaatatctatatggtccagata
tagagggtcacccctggcctggggaggcaaaagcaggcgaccatgaatac
aatgccaacctggtagatctctgctccaaattgttcatggaggagatgtc
acattgagggttgtatagaagctttttatatttctgatttactgatctct
ggagtttgctatagtgcacaggatgtgcttttttttttcaaatcattggg
ccaatgaggctca
gaattcctgtgaaagacgaaagtgcccagcgttcttctgacatttcttct
gttaaacaggaatgagtaatatccccgtggttaagaaatgcctggcacct
ggggatgagacgctcccacccactgatgtcaaggaggctcaaacggtcca
gcccattctcctgttgtcaagctggttcttatttatatctgtgagttggt
ggcctctggtttgctgtgtcctttgagcgctataatcagtgtggcacagt
cgtggttccaatcctatgaatagttctgtcccaagcagttcttacatctc
acgggtgccttctcttccctgaatcttaattttctcatgagtaattggga
gagagggcagagcaggcttaagtcagacccttaatcggatgagttatttc
tagatgctttagacggtccatcctgctgtgaaagaaagcgagaggagctt
ttcctcaaggctcctcctctcccttcttttctgaaagcaaagcaggctta
tttagaatagctcgaagcagaaagctggtaccagttccttcatttaggct
acttcgaagtgttgtctccaggccaacatcagagacatcactggcacact
tggaatattctggaaatgcacttgtatttcactttggcctagatgtaccc
cattcctgtggctcccagcagggaagggagggacacagagagagaaaaac
agaggggatgggggagatggggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_69028225_69029345
seq2: B6Ng01-168E15.b_47_1159 (reverse)

seq1  TGAGCCCTCATTGGCCCACTGATTTGAAAAAAAAAAAAGCACATCCTGGT  50
      |||| ||||||||||||| |||||||  ||||||||||||||||||| ||
seq2  TGAG-CCTCATTGGCCCAATGATTTG--AAAAAAAAAAGCACATCCT-GT  46

seq1  GCACTATGGCAACACT-CAGAGATCAGTAAATCAGAAAATATAAAAGGCT  99
      ||||||| |||| ||| |||||||||||||||||| |||||||||| |||
seq2  GCACTATAGCAA-ACTCCAGAGATCAGTAAATCAG-AAATATAAAAAGCT  94

seq1  TCTATACACCCCTCAATGGTGACATCTCCTCCATGAACAATTTGGAGCAG  149
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  TCTATACAACCCTCAAT-GTGACATCTCCTCCATGAACAATTTGGAGCAG  143

seq1  AGATCTACCAGGTTGGCATTGTATTCATGGTCGCCTGCTTTTGCCTCCCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTACCAGGTTGGCATTGTATTCATGGTCGCCTGCTTTTGCCTCCCC  193

seq1  AGGCCAGGGGTGAACCTCTATATCTGGACCATATAGATATTTCTTCATCT  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGGGGTGACCCTCTATATCTGGACCATATAGATATTTCTTCATCT  243

seq1  ATTCTTTAGCTTTTAAAATAATTTTAAGATCACTTTTGTATACATATGAG  299
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  ATTCTTTAGC-TTTAAAATAA-TTTAAGATCACTTTTGTATACATATGAG  291

seq1  TGCACACACGCATACATGCGTACACACATCATGGTACCATGTGGACAGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACACGCATACATGCGTACACACATCATGGTACCATGTGGACAGTT  341

seq1  TGCAGTAGACACTTCTCTACTTCTACTATGTGGGTCCCCAAGATCCAACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTAGACACTTCTCTACTTCTACTATGTGGGTCCCCAAGATCCAACT  391

seq1  TAGATAGTTGCCATGGCAGCAAGCATCCTTACAGATGGACCCATCTCAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGTTGCCATGGCAGCAAGCATCCTTACAGATGGACCCATCTCAAC  441

seq1  AGCCGGTGTTGGTTACTTGGCACCTGGCAATAGATATCTACAACATGTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGTGTTGGTTACTTGGCACCTGGCAATAGATATCTACAACATGTGT  491

seq1  TTATTTTTTAACTTAAATATATATGTTTATATATTTAGTAGGAACAATCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTAACTTAAATATATATGTTTATATATTTAGTAGGAACAATCA  541

seq1  TTTACTGGGGGAGTGTTCATCAATCCTTCTTGGCTGCCACCTTCCTCATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGGGGGAGTGTTCATCAATCCTTCTTGGCTGCCACCTTCCTCATG  591

seq1  GCTGCTAGCATGTTGCTCAGCTCCTCCCGCTTTCTCTTGGCGCAGCTGTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAGCATGTTGCTCAGCTCCTCCCGCTTTCTCTTGGCGCAGCTGTG  641

seq1  CATGCCCACCCTCTTCTTGACGAACTGAGTGCGCACTTGTCCTTGGAGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCACCCTCTTCTTGACGAACTGAGTGCGCACTTGTCCTTGGAGAC  691

seq1  TTTGAGCAACTCCATGGTGCGCCACTTATAAGGTGCGAAGCTGCACACCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCAACTCCATGGTGCGCCACTTATAAGGTGCGAAGCTGCACACCT  741

seq1  CCCGGATCATGTCCCGCACGAACTTGGTGTGCTTGGTGAGGCTCCCGTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGATCATGTCCCGCACGAACTTGGTGTGCTTGGTGAGGCTCCCGTGG  791

seq1  CGCCGGCTGTGTCTTGGCTTGCTGACATTGTTTGTCACCTTGTGGCCCTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGGCTGTGTCTTGGCTTGCTGACATTGTTTGTCACCTTGTGGCCCTT  841

seq1  GTTGAGGCCCACGGCCATGGGGTAGCGCAGGACCATGGCTGCTGCTCTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGCCCACGGCCATGGGGTAGCGCAGGACCATGGCTGCTGCTCTCC  891

seq1  GATGGCGGCCGGGACAGGAAGTTACTATAGGTATATTTTATTGTCTGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGGCCGGGACAGGAAGTTACTATAGGTATATTTTATTGTCTGCTG  941

seq1  ATGCTTGCAGCTGACTAGCAAGGTTAGTGATGTCAGCTCACTCTGGTTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCAGCTGACTAGCAAGGTTAGTGATGTCAGCTCACTCTGGTTTG  991

seq1  ACTGAGAGAGCCTGCCTCAAAGAAGGTTCAAAAAAGTGAAAAAGATTCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAGAGCCTGCCTCAAAGAAGGTTCAAAAAAGTGAAAAAGATTCCT  1041

seq1  AATATCAGCTGTGGGTGCCCCCTCCCACCTCCATATATGCAAACACACCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGCTGTGGGTGCCCCCTCCCACCTCCATATATGCAAACACACCT  1091

seq1  ACACATTAAAGAAAAAGAATTC  1121
      ||||||||||||||||||||||
seq2  ACACATTAAAGAAAAAGAATTC  1113

seq1: chr10_68902162_68902901
seq2: B6Ng01-168E15.g_67_793

seq1  GAATTCCTGTGAAAGACGAAAGTGCCCAGCGTTCTTCTGACATTTCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGAAAGACGAAAGTGCCCAGCGTTCTTCTGACATTTCTTCT  50

seq1  GTTAAACAGGAATGAGTAATATCCCCGTGGTTAAGAAATGCCTGGCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACAGGAATGAGTAATATCCCCGTGGTTAAGAAATGCCTGGCACCT  100

seq1  GGGGATGAGACGCTCCCACCCACTGATGTCAAGGAGGCTCAAACGGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATGAGACGCTCCCACCCACTGATGTCAAGGAGGCTCAAACGGTCCA  150

seq1  GCCCATTCTCCTGTTGTCAAGCTGGTTCTTATTTATATCTGTGAGTTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTCTCCTGTTGTCAAGCTGGTTCTTATTTATATCTGTGAGTTGGT  200

seq1  GGCCTCTGGTTTGCTGTGTCCTTTGAGCGCTATAATCAGTGTGGCACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTGGTTTGCTGTGTCCTTTGAGCGCTATAATCAGTGTGGCACAGT  250

seq1  CGTGGTTCCAATCCTATGAATAGTTCTGTCCCAAGCAGTTCTTACATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTTCCAATCCTATGAATAGTTCTGTCCCAAGCAGTTCTTACATCTC  300

seq1  ACGGGTGCCTTCTCTTCCCTGAATCTTAATTTTCTCATGAGTAATTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGTGCCTTCTCTTCCCTGAATCTTAATTTTCTCATGAGTAATTGGGA  350

seq1  GAGAGGGCAGAGCAGGCTTAAGTCAGACCCTTAATCGGATGAGTTATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGCAGAGCAGGCTTAAGTCAGACCCTTAATCGGATGAGTTATTTC  400

seq1  TAGATGCTTTAGACGGTCCATCCTGCTGTGAAAGAAAGCGAGAGGAGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCTTTAGACGGTCCATCCTGCTGTGAAAGAAAGCGAGAGGAGCTT  450

seq1  TTCCTCAAGGCTCCTCCTCTCCCTTCTTTTCTGAAAGCAAAGCAGGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAAGGCTCCTCCTCTCCCTTCTTTTCTGAAAGCAAAGCAGGCTTA  500

seq1  TTTAGAATAGCTCGAAGCAGAAAGCTGGTACCAGTTCCTTCATTTAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATAGCTCGAAGCAGAAAGCTGGTACCAGTTCCTTCATTTAGGCT  550

seq1  ACTTCGAAGTGTTGTCTCCAGGCCAACATCAGAGACATCACTGGCACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCGAAGTGTTGTCTCCAGGCCAACATCAGAGACATCACTGGCACACT  600

seq1  TGGAATATTCTGGAAATGCACTTGTATTTCACTTTGGCCTAGATGTACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATATTCTGGAAATGCACTTGTATTTCACTTTGGCCTAGATGTACCC  650

seq1  CATTCCTGTGGCTCCCAGCAGGGAAGGGAGGGACACAGAGAGAGAAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTGTGGCTCCCAGCAGGGAAGGGAGGGACACAGAGAGAGAAAAAC  700

seq1  AGAGGGGATGGGGGAGAT-GGGAGAGAGGAGGAGGGAGAGA  740
      |||||||||||||||||| ||||||||              
seq2  AGAGGGGATGGGGGAGATGGGGAGAGA--------------  727