BAC Information

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BAC

Clone NameB6Ng01-168F07
Chromosome10 (Build37)
Map Location 107,729,034 - 107,860,542
singlet/doubletdoublet
Overlap genePawr, EG667814
Upstream geneLin7a, Myf5, Myf6, Ptprq, EG628870, Ppp1r12a
Downstream geneSyt1, EG368203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168F07.bB6Ng01-168F07.g
ACCDH959596DH959597
length8431,181
definitionDH959596|Mus musculus domesticus DNA, BAC clone: B6Ng01-168F07, 5' end.DH959597|Mus musculus domesticus DNA, BAC clone: B6Ng01-168F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,729,034 - 107,729,875)(107,859,358 - 107,860,542)
sequence
gaattctttctgtcgtaaactcacctacccaagagggctgagtgtgtttt
gtttgtacttttactttaaatttccaaattggcattacattaaagtactc
tagtgtgcaaataccactactgtgtacatttagaggaaattcagaaaggg
gcataaaaaaggagaggaataaagttgtagggtggaaatttgggagtggg
tttttttttaaggcagtagctctaaaatatctccccacccgccatcctca
accccacccctggaacacacaagatgggtgactttcacattccagtgttt
tccagtgtggtagcccggggcctagatgggatgcactggagatcctgaga
cattccttaatgcctgtggtgagagtcttcccactcccttttttcccata
actggtcaggaaagcacattagagttagaaacaataggaagaatgttata
atcagaaaacccagagtctgctctacttttttacagtaaagaaccagcaa
actgtagtcctttgtgtaacaaatatttactgaccgtttcctctgtgcaa
agctctctattcagtttactattgatacagtatttgttattattattatt
attattattattattattatcatcatcattattattattatcatcatcat
catcatcatcatcatcaccacacagattgtgactggtttatctaagctac
ttatgaaaagcaaaggggacactcagaagaactgtgttctgagtaattct
aaatgctacaatcttggtgtatgaacaaatgagatgttttaatgagttga
gaggctcaccaaggagaaggtttgggaggtgggggaaggggta
gaattctacgaagcaaattctccaaccacttttatttaaaaagcataaga
tgtaggactaatgaacaagttaaaaaaagacttagctatgccatatgctg
gggatgattctcaaaatagatccttacctgaataattcccttcagtgtct
agaggataaccgaacacacaatgtttgattgtggggctgcccacgatcgt
gaagttgtcagacgccagctttgatgtatgtgactgagggaaggatggct
gtccttggaacagggattcagtgtgggcttcaactgagagcaggtttctc
acaggcaatcaaagaacagagcagaactcaacagcaggtcacttcacaag
actcgggactcctcaacagcaagtatctttagctggaggattcttcatca
accttaagaacgtctctgcagaataacccttcctaacatggtccctctcc
cgttctccagtcagtcattctctgtcagcttgccccaccttttctaactc
cctcttcattttgtaagaaaagttttcttctagtaagtctgatgtgactg
tttctcagagaaccccaccaaaatatgtagtgacatactctgtgccatga
caataccatggttattattatcagtgttcacgataggagagccatcagga
actacttgtagttcaataagactttaaaccaccacaggaaaagtggttag
actgcaaaaataagttgagtgagatattgagatttcttgtacttttgtgc
gagccgtgcctaaaggaagaggtgactgctcttgaaaactgccccggata
tgcacatgaagggacttctgagaaatggtcacagccaggaggaggctgag
acataaagaactgagtgtaatttacagcctggattagctcttggagcaag
ttcagacacattccagggaaacaatgaagaaatggggagctggagtgttt
attaaaatcgggtccactgtgaacaatgtgaaccactagatgtatgcaca
catgggagaagccggacatttaggacttctcctagactacctaatcctgt
gagctaaccttgtcctagacttttttttttaaatctatgttgttgtggag
agcaatgcttaattccagaggcaggggattctcggtgagttcaatgctac
tccgaatccacatgagtttccaggcctagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_107729034_107729875
seq2: B6Ng01-168F07.b_48_890

seq1  GAATTCTTTCTGTCGTAAACTCACCTACCCAAGAGGGCTGAGTGTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGTCGTAAACTCACCTACCCAAGAGGGCTGAGTGTGTTTT  50

seq1  GTTTGTACTTTTACTTTAAATTTCCAAATTGGCATTACATTAAAGTACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTACTTTTACTTTAAATTTCCAAATTGGCATTACATTAAAGTACTC  100

seq1  TAGTGTGCAAATACCACTACTGTGTACATTTAGAGGAAATTCAGAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGCAAATACCACTACTGTGTACATTTAGAGGAAATTCAGAAAGGG  150

seq1  GCATAAAAAAGGAGAGGAATAAAGTTGTAGGGTGGAAATTTGGGAGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAAAAAGGAGAGGAATAAAGTTGTAGGGTGGAAATTTGGGAGTGGG  200

seq1  TTTTTTTTTAAGGCAGTAGCTCTAAAATATCTCCCCACCCGCCATCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAAGGCAGTAGCTCTAAAATATCTCCCCACCCGCCATCCTCA  250

seq1  ACCCCACCCCTGGAACACACAAGATGGGTGACTTTCACATTCCAGTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACCCCTGGAACACACAAGATGGGTGACTTTCACATTCCAGTGTTT  300

seq1  TCCAGTGTGGTAGCCCGGGGCCTAGATGGGATGCACTGGAGATCCTGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGTGGTAGCCCGGGGCCTAGATGGGATGCACTGGAGATCCTGAGA  350

seq1  CATTCCTTAATGCCTGTGGTGAGAGTCTTCCCACTCCCTTTTTTCCCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTAATGCCTGTGGTGAGAGTCTTCCCACTCCCTTTTTTCCCATA  400

seq1  ACTGGTCAGGAAAGCACATTAGAGTTAGAAACAATAGGAAGAATGTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCAGGAAAGCACATTAGAGTTAGAAACAATAGGAAGAATGTTATA  450

seq1  ATCAGAAAACCCAGAGTCTGCTCTACTTTTTTACAGTAAAGAACCAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAAACCCAGAGTCTGCTCTACTTTTTTACAGTAAAGAACCAGCAA  500

seq1  ACTGTAGTCCTTTGTGTAACAAATATTTACTGACCGTTTCCTCTGTGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGTCCTTTGTGTAACAAATATTTACTGACCGTTTCCTCTGTGCAA  550

seq1  AGCTCTCTATTCAGTTTACTATTGATACAGTATTTGTTATTATTATTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTATTCAGTTTACTATTGATACAGTATTTGTTATTATTATTATT  600

seq1  ATTATTATTATTATTATTATCATCATCATTATTATTATTATCATCATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTATTATTATCATCATCATTATTATTATTATCATCATCAT  650

seq1  CATCATCATCATCATCACCACACAGATTGTGACTGGTTTATCTAAGCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATCATCATCACCACACAGATTGTGACTGGTTTATCTAAGCTAC  700

seq1  TTATGAAAAGCAAAGGGGACACTCAGAAGAACTGTGTTCTGAGTAATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAAAGCAAAGGGGACACTCAGAAGAACTGTGTTCTGAGTAATTCT  750

seq1  AAATGCTACAATCTTGGTGTATGAACAAATGAGATG-TTTAATGAGTTGA  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAATGCTACAATCTTGGTGTATGAACAAATGAGATGTTTTAATGAGTTGA  800

seq1  GAGGCTCACCAAGGAGAAGGTTTGGGAGGTGGGGGAGGGGGTA  842
      |||||||||||||||||||||||||||||||||||| ||||||
seq2  GAGGCTCACCAAGGAGAAGGTTTGGGAGGTGGGGGAAGGGGTA  843

seq1: chr10_107859358_107860542
seq2: B6Ng01-168F07.g_70_1250 (reverse)

seq1  GGCTA-GCCTGG-AACTCATGTTGA-TCAGAGTAGCATTGAACTCACAGA  47
      ||||| |||||| ||||||||| || || |||||||||||||||||| ||
seq2  GGCTAGGCCTGGAAACTCATGTGGATTCGGAGTAGCATTGAACTCACCGA  50

seq1  GATCCCCCTGCCTCTGGGATTTAAGCATTTGCTCTAC-CAACAACACATA  96
      ||  ||||||||||| ||| ||||||| ||||||| | ||||||||    
seq2  GAATCCCCTGCCTCT-GGAATTAAGCA-TTGCTCTCCACAACAACA---T  95

seq1  AGATTTAAAAAAAAAAAGTCTTTAGGACATGTTTAGCTTCACAGAATTAA  146
      |||||| |||||||||||||  ||||||| | ||||| |||||| ||| |
seq2  AGATTT-AAAAAAAAAAGTC--TAGGACAAGGTTAGC-TCACAGGATT-A  140

seq1  GGTAGTCTA-GAGAAGTCCTAAATGTCCTGTCTCTCCCATGTTGTGCCTT  195
      ||||||||| |||||||||||||||||| |  ||||||||| ||||| | 
seq2  GGTAGTCTAGGAGAAGTCCTAAATGTCCGGCTTCTCCCATG-TGTGCAT-  188

seq1  AACATCTAGT-GTTCACATTGTTCACAGT-GAACCGATTTTAATAAACAC  243
       ||||||||| |||||||||||||||||| || |||||||||||||||||
seq2  -ACATCTAGTGGTTCACATTGTTCACAGTGGACCCGATTTTAATAAACAC  237

seq1  T-CAGCT-CCCATTTCTTCATTGTTTCCCTGGAATGTGTCTGAACTTGCT  291
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTCCCCATTTCTTCATTGTTTCCCTGGAATGTGTCTGAACTTGCT  287

seq1  CCAAGAGCTAATCCAGGCTGTAAATTACACTCAGTTCTTTATGTCTCAGC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGCTAATCCAGGCTGTAAATTACACTCAGTTCTTTATGTCTCAGC  337

seq1  CTCCTCCTGGCTGTGACCATTTCTCAGAAGTCCCTTCATGTGCATATCCG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTGGCTGTGACCATTTCTCAGAAGTCCCTTCATGTGCATATCCG  387

seq1  GGGCAGTTTTCAAGAGCAGTCACCTCTTCCTTTAGGCACGGCTCGCACAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTTTTCAAGAGCAGTCACCTCTTCCTTTAGGCACGGCTCGCACAA  437

seq1  AAGTACAAGAAATCTCAATATCTCACTCAACTTATTTTTGCAGTCTAACC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAAGAAATCTCAATATCTCACTCAACTTATTTTTGCAGTCTAACC  487

seq1  ACTTTTCCTGTGGTGGTTTAAAGTCTTATTGAACTACAAGTAGTTCCTGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCCTGTGGTGGTTTAAAGTCTTATTGAACTACAAGTAGTTCCTGA  537

seq1  TGGCTCTCCTATCGTGAACACTGATAATAATAACCATGGTATTGTCATGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTCCTATCGTGAACACTGATAATAATAACCATGGTATTGTCATGG  587

seq1  CACAGAGTATGTCACTACATATTTTGGTGGGGTTCTCTGAGAAACAGTCA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGTATGTCACTACATATTTTGGTGGGGTTCTCTGAGAAACAGTCA  637

seq1  CATCAGACTTACTAGAAGAAAACTTTTCTTACAAAATGAAGAGGGAGTTA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGACTTACTAGAAGAAAACTTTTCTTACAAAATGAAGAGGGAGTTA  687

seq1  GAAAAGGTGGGGCAAGCTGACAGAGAATGACTGACTGGAGAACGGGAGAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGTGGGGCAAGCTGACAGAGAATGACTGACTGGAGAACGGGAGAG  737

seq1  GGACCATGTTAGGAAGGGTTATTCTGCAGAGACGTTCTTAAGGTTGATGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATGTTAGGAAGGGTTATTCTGCAGAGACGTTCTTAAGGTTGATGA  787

seq1  AGAATCCTCCAGCTAAAGATACTTGCTGTTGAGGAGTCCCGAGTCTTGTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCTCCAGCTAAAGATACTTGCTGTTGAGGAGTCCCGAGTCTTGTG  837

seq1  AAGTGACCTGCTGTTGAGTTCTGCTCTGTTCTTTGATTGCCTGTGAGAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACCTGCTGTTGAGTTCTGCTCTGTTCTTTGATTGCCTGTGAGAAA  887

seq1  CCTGCTCTCAGTTGAAGCCCACACTGAATCCCTGTTCCAAGGACAGCCAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTCAGTTGAAGCCCACACTGAATCCCTGTTCCAAGGACAGCCAT  937

seq1  CCTTCCCTCAGTCACATACATCAAAGCTGGCGTCTGACAACTTCACGATC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTCAGTCACATACATCAAAGCTGGCGTCTGACAACTTCACGATC  987

seq1  GTGGGCAGCCCCACAATCAAACATTGTGTGTTCGGTTATCCTCTAGACAC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAGCCCCACAATCAAACATTGTGTGTTCGGTTATCCTCTAGACAC  1037

seq1  TGAAGGGAATTATTCAGGTAAGGATCTATTTTGAGAATCATCCCCAGCAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGAATTATTCAGGTAAGGATCTATTTTGAGAATCATCCCCAGCAT  1087

seq1  ATGGCATAGCTAAGTCTTTTTTTAACTTGTTCATTAGTCCTACATCTTAT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATAGCTAAGTCTTTTTTTAACTTGTTCATTAGTCCTACATCTTAT  1137

seq1  GCTTTTTAAATAAAAGTGGTTGGAGAATTTGCTTCGTAGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTAAATAAAAGTGGTTGGAGAATTTGCTTCGTAGAATTC  1181