BAC Information

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BAC

Clone NameB6Ng01-168O15
Chromosome10 (Build37)
Map Location 69,388,875 - 69,538,774
singlet/doubletdoublet
Overlap geneAnk3, 5730416O20Rik
Upstream geneA930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371, LOC100039734
Downstream geneCcdc6, 2310015B20Rik, Slc16a9, LOC632955, 1200015N20Rik, LOC665398, Phyhipl, EG665429, Bicc1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168O15.bB6Ng01-168O15.g
ACCDH960029DH960030
length1,111489
definitionDH960029|Mus musculus domesticus DNA, BAC clone: B6Ng01-168O15, 5' end.DH960030|Mus musculus domesticus DNA, BAC clone: B6Ng01-168O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,388,875 - 69,389,995)(69,538,280 - 69,538,774)
sequence
gaattcctggaagcctcgggaaagtactccccaaccagtcgtggtggaaa
tggctttgccacacagtaagatctttctttaattcctgcttggagggctc
tggtttggtttctgatggagaaatatgcaaatacccctccccttggaata
cttgacctagtgtgaaacagagtaacatccggaagatgatctgtttactg
ttttacatttggaaaaaaaaaaaaaaagaagaagaagaaagaaagaaagt
agttaccagtgtgtttcaagacctgattggttgctaaaaagttgagctcc
tgtggtttcgagagagttgaaatgaatgggaattgtaaacagcagtgaat
ggagaagcgagccatgaatcatttgcctctgagagaacctagcatataca
catttggaacctctttgggccagccagcttgtatctagaaagggaaggaa
aggaattttaaagagagaccgggtttgctcgagtggagggaacttttgtt
gcgccgcctgtgctatactttgagagggatgggaactatcccagagggca
aaagacgattgaaaaacctgccccgttgctcttggaatgtggttttccgt
gtgagctcactaggcacacagagagcttggaagagcattttgcatgcatt
aactctttgtgtggatagttggagcacagttcctctggttccccccttct
ggctgcaggagcccctaggtcaggggctagtcttttagaaggcagaatta
gttactttgcaagtagacctcaagcaagcggtgggaacagctgagctgac
tcgttaatctgagagatttagaaacggttcaaagttagtgtgctccgagg
tctcccaggcaggcgggtcctgctcccaccagtaactctcgaaactcgga
tagatatgccccagcctgaaatcctaagaggaaactggtttaaaaaacac
cgccaatctctttcctaggcagtgagatagctcagtggtttaaaagcact
tgctcagcctgactcagtttgaccctgaaacccacgtaatggagcagact
gactcgaacggtgtccttctgactcacaggtgccctttgcacgtgcacac
taacacacaca
tagtgctctcatagggagatgagaaacaggagaattagctcatgggtcag
ctcgcatggagtataaagagtatcagaagcaacatgagagaccctgcctc
gacaatgtgataaatgaataaaaacttgaaagctgtctgagttatccctg
agagaccctggcttgcaaacaaatagataaaataaggtggagagtgatgg
aaaacactggtgttgaccactggccaatacatgcatacacacatgcacac
aaatatgcacacacacacacacacacgtgaacatgtatacacacacatgt
gaacatgtatacacacacaccagagagagagaggtgctaaatgatttctg
ttgctcttagactttcttcccagagtcattccatgtctattgggatccag
ttcattttctgtttggacacagtacttatggatagtaaataccaactcac
agaaaaaacaagatgcattaccctgcaacacctccctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_69388875_69389995
seq2: B6Ng01-168O15.b_47_1157

seq1  GAATTCCTGGAAGCCTCGGGAAAGTACTCCCCAACCAGTCGTGGTGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAAGCCTCGGGAAAGTACTCCCCAACCAGTCGTGGTGGAAA  50

seq1  TGGCTTTGCCACACAGTAAGATCTTTCTTTAATTCCTGCTTGGAGGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGCCACACAGTAAGATCTTTCTTTAATTCCTGCTTGGAGGGCTC  100

seq1  TGGTTTGGTTTCTGATGGAGAAATATGCAAATACCCCTCCCCTTGGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGTTTCTGATGGAGAAATATGCAAATACCCCTCCCCTTGGAATA  150

seq1  CTTGACCTAGTGTGAAACAGAGTAACATCCGGAAGATGATCTGTTTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCTAGTGTGAAACAGAGTAACATCCGGAAGATGATCTGTTTACTG  200

seq1  TTTTACATTTGGAAAAAAAAAAAAAAAGAAGAAGAAGAAAGAAAGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATTTGGAAAAAAAAAAAAAAAGAAGAAGAAGAAAGAAAGAAAGT  250

seq1  AGTTACCAGTGTGTTTCAAGACCTGATTGGTTGCTAAAAAGTTGAGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCAGTGTGTTTCAAGACCTGATTGGTTGCTAAAAAGTTGAGCTCC  300

seq1  TGTGGTTTCGAGAGAGTTGAAATGAATGGGAATTGTAAACAGCAGTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTCGAGAGAGTTGAAATGAATGGGAATTGTAAACAGCAGTGAAT  350

seq1  GGAGAAGCGAGCCATGAATCATTTGCCTCTGAGAGAACCTAGCATATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCGAGCCATGAATCATTTGCCTCTGAGAGAACCTAGCATATACA  400

seq1  CATTTGGAACCTCTTTGGGCCAGCCAGCTTGTATCTAGAAAGGGAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGAACCTCTTTGGGCCAGCCAGCTTGTATCTAGAAAGGGAAGGAA  450

seq1  AGGAATTTTAAAGAGAGACCGGGTTTGCTCGAGTGGAGGGAACTTTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTTAAAGAGAGACCGGGTTTGCTCGAGTGGAGGGAACTTTTGTT  500

seq1  GCGCCGCCTGTGCTATACTTTGAGAGGGATGGGAACTATCCCAGAGGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCGCCTGTGCTATACTTTGAGAGGGATGGGAACTATCCCAGAGGGCA  550

seq1  AAAGACGATTGAAAAACCTGCCCCGTTGCTCTTGGAATGTGGTTTTCCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACGATTGAAAAACCTGCCCCGTTGCTCTTGGAATGTGGTTTTCCGT  600

seq1  GTGAGCTCACTAGGCACACAGAGAGCTTGGAAGAGCATTTTGCATGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTCACTAGGCACACAGAGAGCTTGGAAGAGCATTTTGCATGCATT  650

seq1  AACTCTTTGTGTGGATAGTTGGAGCACAGTTCCTCTGGTTCCCCCCTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTGTGTGGATAGTTGGAGCACAGTTCCTCTGGTTCCCCCCTTCT  700

seq1  GGCTGCAGGAGCCCCTAGGTCA-GGGCTAGTCTTTTAGAAGGCAGAATTA  749
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGCTGCAGGAGCCCCTAGGTCAGGGGCTAGTCTTTTAGAAGGCAGAATTA  750

seq1  GTTACTTTGCAAGTAGACCTCAAGCAAGCGGTGGGAACAGCTGAGCTGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTTGCAAGTAGACCTCAAGCAAGCGGTGGGAACAGCTGAGCTGAC  800

seq1  TCGTTAATCTGAGAGATTTAGAAACGGTTCAAAGTTAGTGTGCTCCGAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAATCTGAGAGATTTAGAAACGGTTCAAAGTTAGTGTGCTCCGAGG  850

seq1  TCTCCCAGGCAGGCGGGTCCTGCTCCCACCAGTAACTCCCGAAACTCGGA  899
      |||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  TCTCCCAGGCAGGCGGGTCCTGCTCCCACCAGTAACTCTCGAAACTCGG-  899

seq1  ATAGATATGCCCCAGCCTGAAATCCTAAGAGGAAACTGGTTTAAAAAAAC  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATAGATATGCCCCAGCCTGAAATCCTAAGAGGAAACTGGTTT-AAAAAAC  948

seq1  ACCGCCAATCTCTTTCCTAGGCAGGTGAGATAGCTCAGTTGGTTTAAAAG  999
      ||||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  ACCGCCAATCTCTTTCCTAGGCA-GTGAGATAGCTCAG-TGGTTTAAAAG  996

seq1  CACTTGCTCAGCCTGACTCAGTTTGACCCTGAAACCCACGTAATGGAAGG  1049
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  CACTTGCTCAGCCTGACTCAGTTTGACCCTGAAACCCACGTAATGGA--G  1044

seq1  CAAGAACTGACTCGAACGGTTGTCC-TCTGACCTCCACAGGTGCCCTTTG  1098
      ||   |||||||||||||| ||||| ||||||   |||||||||||||| 
seq2  CA--GACTGACTCGAACGG-TGTCCTTCTGAC--TCACAGGTGCCCTTT-  1088

seq1  GCACGTGCACACTAACACACACA  1121
      |||||||||||||||||||||||
seq2  GCACGTGCACACTAACACACACA  1111

seq1: chr10_69538280_69538774
seq2: B6Ng01-168O15.g_68_562 (reverse)

seq1  GGAGGGAGGTGTTGCAGGGTAATGCATCTTGTTTTTTCTGTGAGTTGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGTGTTGCAGGGTAATGCATCTTGTTTTTTCTGTGAGTTGGTA  50

seq1  TTTACTATCCATAAGTACTGTGTCCAAACAGAAAATGAACTGGATCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATCCATAAGTACTGTGTCCAAACAGAAAATGAACTGGATCCCAA  100

seq1  TAGACATGGAATGACTCTGGGAAGAAAGTCTAAGAGCAACAGAAATCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACATGGAATGACTCTGGGAAGAAAGTCTAAGAGCAACAGAAATCATT  150

seq1  TAGCACCTCTCTCTCTCTGGTGTGTGTGTATACATGTTCACATGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACCTCTCTCTCTCTGGTGTGTGTGTATACATGTTCACATGTGTGTG  200

seq1  TATACATGTTCACGTGTGTGTGTGTGTGTGTGCATATTTGTGTGCATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATGTTCACGTGTGTGTGTGTGTGTGTGCATATTTGTGTGCATGTG  250

seq1  TGTATGCATGTATTGGCCAGTGGTCAACACCAGTGTTTTCCATCACTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCATGTATTGGCCAGTGGTCAACACCAGTGTTTTCCATCACTCTC  300

seq1  CACCTTATTTTATCTATTTGTTTGCAAGCCAGGGTCTCTCAGGGATAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTATTTTATCTATTTGTTTGCAAGCCAGGGTCTCTCAGGGATAACT  350

seq1  CAGACAGCTTTCAAGTTTTTATTCATTTATCACATTGTCGAGGCAGGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGCTTTCAAGTTTTTATTCATTTATCACATTGTCGAGGCAGGGTC  400

seq1  TCTCATGTTGCTTCTGATACTCTTTATACTCCATGCGAGCTGACCCATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTTGCTTCTGATACTCTTTATACTCCATGCGAGCTGACCCATGA  450

seq1  GCTAATTCTCCTGTTTCTCATCTCCCTATGAGAGCACTAGAATTC  495
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTCTCCTGTTTCTCATCTCCCTATGAGAGCACTAGAATTC  495