BAC Information

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BAC

Clone NameB6Ng01-169B21
Chromosome10 (Build37)
Map Location 102,108,474 - 102,219,142
singlet/doubletdoublet
Overlap genenone
Upstream geneMgat4c, LOC667652, Nts, Pamci
Downstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169B21.bB6Ng01-169B21.g
ACCDH960179DH960180
length1,0831,138
definitionDH960179|Mus musculus domesticus DNA, BAC clone: B6Ng01-169B21, 5' end.DH960180|Mus musculus domesticus DNA, BAC clone: B6Ng01-169B21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,108,474 - 102,109,568)(102,217,995 - 102,219,142)
sequence
gaattctctcaaatcaagaatatattgaaaaggtttcatgttaaaagaaa
aactgaaaactaaatatgctaagttaaaagatactttaaattgtaatagg
aaaaatcactatatactaagaaaatataatgtacttggttattttgacca
aacattgaaataaaaaggggtccatcattaaccattaaccacagacaaca
cagtaagagtgactttttcttttcagagatgcaaccagaaatatagcttt
gaggatttttatttggaaggttttggtcttatctattacattggagaagt
atatgcaaaataaaaactgtatatttgttctgttttcttttacctgcttg
tgtgtgtgtgtgtgcacatacaaatatgcacatgtgtgcacacacactgt
gttcatacacattaagtaataaaataattttgaactttgataattttatt
taaatcagagattgctaaccatcctcagtttgtaggtagtaggagagtca
taaggcttgaatgtcacccttgcctcctaagatactgtcttagtcagttt
ttccaatcctgcacaaaacatcataaccaagaagcaagttggggaggaaa
gggtttattcagcttatacttccacattgctgttcatcaccaaggaagtt
agtactggaactcaagcaggtcaggaagcagaaggtgatgcagaggccat
ggagggatgttacttactggcttgcttcccctagcttgctcagtttgctt
tcttatagaacccaggactaccagcagaggaatggcaccacccaaaatgg
gccctcctacccttgatcacaattgagaaaaggctttacagctggatctc
atgaggcatttccttaagggaggctccttttctctgtgatactccagctt
gtgccaagttgacatcccaaatcagccatataggtacccattgtgttttt
cttatttaactcttctttaatcagtaaactgatttcagtgattcaaataa
acagtgtatacaatacagcttttcttagtggactgcatcatctctccctc
ttcttactcaatcgtatgccattcttcatgact
gaattcagtggagcagggccctggtggcagtggcttcagaggatgtggct
ataaacttcaggaaggaaaagtaggctttgctggaactttcttggaagag
tgtgtaccaagatatgattctgggaactggctggaacattgctgctttag
gaaacaaacgacaacatcagcatgttgaaggcctttatttcaatgccaga
agaaatctaagacactgtgtatgttaccctgcatgtgaactacacaagcc
ccagaaataaccgatataacattttttctcaattattaaaagaaatatgg
ggactcacattgagattagaccttgaaaatgaaagaagctctcaacctcc
aattttattttagtgggtttctgaccccaaaaaagaaattgataagtctc
catctcctttggatcagctaaggtgagtgttgcattatctcccataggta
acgaatatagacccttgtcatctggaagcagttaccaaagaggtgatctg
ctgaccctcagcttcccatgaaaatcagtgaggatcatgtcactcatggg
gtaatgatccaggaaataaggccagctctcataatttaactccaagaccc
agcaactaaggaaggccatgaatttggcctttctctaggctgctgaggtt
aaacaaacatcttctaacaaactaagtaaagaatctcctaaaatgcatgt
gtttgtgtgcacaatgtgcattatagatacacataggatggcatatgcca
gataatggaaataataaaccctggtgtcattgagaaatgacaaaacataa
aaatgcataggaactcatatcatgtcagtaattcctttttcttagcttgg
tgtttaatatatggttgtgatattgtcacctgaacatgccatttgcttaa
ttcaaaatgttaatggcataagtgtaatcatggctctgtttcttttggta
caatccctttttctttttcattgaaaaataatttttcacgcactattatg
ttctgattgtattttcccctctttcatcctcccctattgcttccacccac
cttcccagctccctctttctcgttctcctcttttaaaaggcatgcaacaa
actattaaaataaattttagaatggttacacaccaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_102108474_102109568
seq2: B6Ng01-169B21.b_43_1125

seq1  GAATTCTCTCAAATCAAGAATATATTGAAAAGGTTTCATGTTAAAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAAATCAAGAATATATTGAAAAGGTTTCATGTTAAAAGAAA  50

seq1  AACTGAAAACTAAATATGCTAAGTTAAAAGATACTTTAAATTGTAATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAAACTAAATATGCTAAGTTAAAAGATACTTTAAATTGTAATAGG  100

seq1  AAAAATCACTATATACTAAGAAAATATAATGTACTTGGTTATTTTGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCACTATATACTAAGAAAATATAATGTACTTGGTTATTTTGACCA  150

seq1  AACATTGAAATAAAAAGGGGTCCATCATTAACCATTAACCACAGACAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGAAATAAAAAGGGGTCCATCATTAACCATTAACCACAGACAACA  200

seq1  CAGTAAGAGTGACTTTTTCTTTTCAGAGATGCAACCAGAAATATAGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGAGTGACTTTTTCTTTTCAGAGATGCAACCAGAAATATAGCTTT  250

seq1  GAGGATTTTTATTTGGAAGGTTTTGGTCTTATCTATTACATTGGAGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTTTTATTTGGAAGGTTTTGGTCTTATCTATTACATTGGAGAAGT  300

seq1  ATATGCAAAATAAAAACTGTATATTTGTTCTGTTTTCTTTTACCTGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAAATAAAAACTGTATATTTGTTCTGTTTTCTTTTACCTGCTTG  350

seq1  TGTGTGTGTGTGTGCACATACAAATATGCACATGTGTGCACACACACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGCACATACAAATATGCACATGTGTGCACACACACTGT  400

seq1  GTTCATACACATTAAGTAATAAAATAATTTTGAACTTTGATAATTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATACACATTAAGTAATAAAATAATTTTGAACTTTGATAATTTTATT  450

seq1  TAAATCAGAGATTGCTAACCATCCTCAGTTTGTAGGTAGTAGGAGAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGAGATTGCTAACCATCCTCAGTTTGTAGGTAGTAGGAGAGTCA  500

seq1  TAAGGCTTGAATGTCACCCTTGCCTCCTAAGATACTGTCTTAGTCAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTTGAATGTCACCCTTGCCTCCTAAGATACTGTCTTAGTCAGTTT  550

seq1  TTCCAATCCTGCACAAAACATCATAACCAAGAAGCAAGTTGGGGAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATCCTGCACAAAACATCATAACCAAGAAGCAAGTTGGGGAGGAAA  600

seq1  GGGTTTATTCAGCTTATACTTCCACATTGCTGTTCATCACCAAGGAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTATTCAGCTTATACTTCCACATTGCTGTTCATCACCAAGGAAGTT  650

seq1  AGTACTGGAACTCAAGCAGGTCAGGAAGCAGAAGGTGATGCAGAGGCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGGAACTCAAGCAGGTCAGGAAGCAGAAGGTGATGCAGAGGCCAT  700

seq1  GGAGGGATGTTACTTACTGGCTTGCTTCCCCTAGCTTGCTCAGTTTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGATGTTACTTACTGGCTTGCTTCCCCTAGCTTGCTCAGTTTGCTT  750

seq1  TCTTATAGAACCCAGGACTACCAGCAGAGGAATGGCACCACCCAAAATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAGAACCCAGGACTACCAGCAGAGGAATGGCACCACCCAAAATGG  800

seq1  GCCCTCCTACCCTTGATCACTAATTGAGAAAAGGCCTTACAGCTGGATCT  850
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  GCCCTCCTACCCTTGATCAC-AATTGAGAAAAGGCTTTACAGCTGGATCT  849

seq1  CATGGAGGCATTTCCTTAAGGGAGGCTCC-TTTCTCTGTGATAACTCCAG  899
      ||| ||||||||||||||||||||||||| |||||||||||| |||||||
seq2  CAT-GAGGCATTTCCTTAAGGGAGGCTCCTTTTCTCTGTGAT-ACTCCAG  897

seq1  CTTGTGCCAAGTTGACATCCCAAATCAGCCAATATAGGTACCCATTGTGT  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTGTGCCAAGTTGACATCCCAAATCAGCC-ATATAGGTACCCATTGTGT  946

seq1  TTTTCTTATTTAACTCTTCTTTAATCAGTAAACTGATTTTCAGTTGATTC  999
      |||||||||||||||||||||||||||||||||||| |||||| ||||||
seq2  TTTTCTTATTTAACTCTTCTTTAATCAGTAAACTGA-TTTCAG-TGATTC  994

seq1  AAATAAACAAGTGTATACAATATCAGC-TTTCTTAGT-GACTGCATCCAT  1047
      |||||||| ||||||||||||| |||| ||||||||| |||||||| |||
seq2  AAATAAAC-AGTGTATACAATA-CAGCTTTTCTTAGTGGACTGCAT-CAT  1041

seq1  CTCTTCTCCTCTTCTCTACCTCAATCTTAATTCCTTTTCTTCATGACT  1095
      ||||   |||||||| || ||||||| ||  | |  ||||||||||||
seq2  CTCT--CCCTCTTCT-TA-CTCAATCGTA--TGCCATTCTTCATGACT  1083

seq1: chr10_102217995_102219142
seq2: B6Ng01-169B21.g_67_1204 (reverse)

seq1  TTTTGTGTGTGTAACAATTTCTTAAATTTATTTTTATTAGTTTTGTTTAC  50
      ||||| ||||||||| | |||| ||||||| ||||| ||||||   || |
seq2  TTTTG-GTGTGTAACCA-TTCTAAAATTTA-TTTTAATAGTTT--GTTGC  45

seq1  ATGCCTTTTAAAAGA-GAGAACGAGAAAGGAAGTGAAGCTGGGGAGGTGG  99
      ||||||||||||||| |||||||||||||  || | ||||||| ||||||
seq2  ATGCCTTTTAAAAGAGGAGAACGAGAAAG--AG-GGAGCTGGGAAGGTGG  92

seq1  GTGGAAGCAATTAGGGGAGGATTGAAAGAGGGGAAAATACAATCAGAACA  149
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  GTGGAAGCAA-TAGGGGAGGA-TGAAAGAGGGGAAAATACAATCAGAACA  140

seq1  T-ATAGTGCGTGAAAAATTATTTTTCAATGAAAAAGAAAAAAGGGATTGT  198
      | |||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAATAGTGCGTGAAAAATTATTTTTCAATGAAAAAG-AAAAAGGGATTGT  189

seq1  ACCAAAAGAAACAGAGCCATGATTACACTTATGCCATTAACATTTTTGAA  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCAAAAGAAACAGAGCCATGATTACACTTATGCCATTAACA-TTTTGAA  238

seq1  TTAAGCAAATGGCATGTTCAGGTGACAATATCACAACCATATATTAAACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAAATGGCATGTTCAGGTGACAATATCACAACCATATATTAAACA  288

seq1  CCAAGCTAAGAAAAAGGAATTACTGACATGATATGAGTTCCTATGCATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTAAGAAAAAGGAATTACTGACATGATATGAGTTCCTATGCATTT  338

seq1  TTATGTTTTGTCATTTCTCAATGACACCAGGGTTTATTATTTCCATTATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTTGTCATTTCTCAATGACACCAGGGTTTATTATTTCCATTATC  388

seq1  TGGCATATGCCATCCTATGTGTATCTATAATGCACATTGTGCACACAAAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATATGCCATCCTATGTGTATCTATAATGCACATTGTGCACACAAAC  438

seq1  ACATGCATTTTAGGAGATTCTTTACTTAGTTTGTTAGAAGATGTTTGTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATTTTAGGAGATTCTTTACTTAGTTTGTTAGAAGATGTTTGTTT  488

seq1  AACCTCAGCAGCCTAGAGAAAGGCCAAATTCATGGCCTTCCTTAGTTGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAGCAGCCTAGAGAAAGGCCAAATTCATGGCCTTCCTTAGTTGCT  538

seq1  GGGTCTTGGAGTTAAATTATGAGAGCTGGCCTTATTTCCTGGATCATTAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTGGAGTTAAATTATGAGAGCTGGCCTTATTTCCTGGATCATTAC  588

seq1  CCCATGAGTGACATGATCCTCACTGATTTTCATGGGAAGCTGAGGGTCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAGTGACATGATCCTCACTGATTTTCATGGGAAGCTGAGGGTCAG  638

seq1  CAGATCACCTCTTTGGTAACTGCTTCCAGATGACAAGGGTCTATATTCGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCACCTCTTTGGTAACTGCTTCCAGATGACAAGGGTCTATATTCGT  688

seq1  TACCTATGGGAGATAATGCAACACTCACCTTAGCTGATCCAAAGGAGATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATGGGAGATAATGCAACACTCACCTTAGCTGATCCAAAGGAGATG  738

seq1  GAGACTTATCAATTTCTTTTTTGGGGTCAGAAACCCACTAAAATAAAATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTATCAATTTCTTTTTTGGGGTCAGAAACCCACTAAAATAAAATT  788

seq1  GGAGGTTGAGAGCTTCTTTCATTTTCAAGGTCTAATCTCAATGTGAGTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTGAGAGCTTCTTTCATTTTCAAGGTCTAATCTCAATGTGAGTCC  838

seq1  CCATATTTCTTTTAATAATTGAGAAAAAATGTTATATCGGTTATTTCTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTTCTTTTAATAATTGAGAAAAAATGTTATATCGGTTATTTCTGG  888

seq1  GGCTTGTGTAGTTCACATGCAGGGTAACATACACAGTGTCTTAGATTTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTGTAGTTCACATGCAGGGTAACATACACAGTGTCTTAGATTTCT  938

seq1  TCTGGCATTGAAATAAAGGCCTTCAACATGCTGATGTTGTCGTTTGTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCATTGAAATAAAGGCCTTCAACATGCTGATGTTGTCGTTTGTTTC  988

seq1  CTAAAGCAGCAATGTTCCAGCCAGTTCCCAGAATCATATCTTGGTACACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCAGCAATGTTCCAGCCAGTTCCCAGAATCATATCTTGGTACACA  1038

seq1  CTCTTCCAAGAAAGTTCCAGCAAAGCCTACTTTTCCTTCCTGAAGTTTAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCAAGAAAGTTCCAGCAAAGCCTACTTTTCCTTCCTGAAGTTTAT  1088

seq1  AGCCACATCCTCTGAAGCCACTGCCACCAGGGCCCTGCTCCACTGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACATCCTCTGAAGCCACTGCCACCAGGGCCCTGCTCCACTGAATTC  1138