BAC Information

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BAC

Clone NameB6Ng01-169H12
Chromosome10 (Build37)
Map Location 57,897,508 - 58,025,356
singlet/doubletdoublet
Overlap geneRanbp2, 6230424H07Rik
Upstream geneLOC629742, LOC668363, Hsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a, EG664783, 4933403O03Rik, EG245263, Gcc2, Lims1
Downstream geneLOC100038981, Edar, LOC624335, LOC100039099, Sh3md4, Sept10, Ankrd57, LOC664892, P4ha1, LOC100039174, Pla2g12b, Oit3, Ccdc109a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169H12.bB6Ng01-169H12.g
ACCDH960441DH960442
length1,1931,142
definitionDH960441|Mus musculus domesticus DNA, BAC clone: B6Ng01-169H12, 5' end.DH960442|Mus musculus domesticus DNA, BAC clone: B6Ng01-169H12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,024,672 - 58,025,356)(57,897,508 - 57,898,649)
sequence
gaattctttcccaggcgtaacacatcttcactgcaaagtacatgcttcag
tgggtggtggccactttgtgattccaagaggggctgctattaactgactg
ggagatataaattttaaattatgatttttgctgtttaaatattcctgtag
gatgtagttctttgtaaatactccttaatttagtgtattttatgtttgaa
tatgagttttagccatccagttaacacagaatgaagtaggaaatgtgtac
aaagccaccattctgaaatttctgagaattcctgagatactgatttattg
tccctgaatctcaaagagcaacatgttaggaatttggaaatactgagaag
ccactgtggaaatcagtatggagatcccaaaaaaactaaatatagaacta
cgctgtcacccatcttcactactaggtcagcacaccacagagctctgtgc
atccgtgttcacagctgcgttattcacaacagctgggaaatggacgaatc
cttcaagtccatcaacaggtgagttaagagaaaacgtggcatatgcacat
acttgagggaactttatacggcataaagaaaaacaagatcatgacatttt
ctgaaaacagatgcaaatggaattatgaaaaatgaaataaaccagactca
gggacaaagatcacattatttctcatacaggagcttacattttaggttat
gtgcacaggtatatagctatagctatatgtttgtttttgcaggatactga
agtagaaaaggaatcatgagaggggaggaagaggttgcaggggatgtggg
aaataggaatgacaacaggaaacgtgctaggaagggacaaaggaggacta
gctggaggaagaccgaagccagctggtaaagggcacagaggagggcaggg
ggctggggcacacaacaaggtatgacacgtgtgtcaagtgccaaacagcc
accatttacagcactgtgcagaagtgcctgtgtatgagtaacacgttctg
atcagagggaaacgcaagcatcatttctttacagactacagataaaatct
tactgacttctatctgttcatctgagcaggctgtcgatgacatggtatag
agccctttactgaatattccaggttaggatactgaatgcttggtactcaa
agtaaggtttccttcctgtctctcaatgtccaacaagggaatc
gaattcagtgtgaagacttaactcccaggagaaccagaaggactctgtca
gcttgaagttcctgtccaggaacacaatagtcattctggaccacagcagg
aaatatgaacccctgtacatcttcaggagacacctgctctgcagcttccc
catggcccagagtgaggctgagttctgtgtggagtgtggaatctcactgg
ggggctccaaataaaacagtcccataaaagtccgacatgatctgagactg
cgagaacttccccttggtggcggactgaggaggtatataatggatctgtc
ctgcagagacgtgcctagtgcagtgcctaattcattagagtcattcagtc
aaatatctgctgggaattgatggaaccgatcagttttttcagatatcagt
aacagtttttatgagcctgtgatcagatcttgaataccaacagtctacat
gggttctactaccattccagtcacaacaatggaggcatgcaagaaaagat
agacgatgttgtaggcgccaccttatctacagggattctgacccaagacc
tacccacagtccatttggctactatgctatttatttatttatttatttat
ttatttatttatttgcaagaaggtatcaattagtctgtcctttggtgttt
atgacctttgcaatgctactcctgtatttatttatttatttatttattta
tttatttattttatttgcaagaaaggtatcaattagtctgtccttttggt
gtttatgacctttgcaatgctactcctgtatttatttatttatttattta
tttatttatttatttatttgcaagaaggtatcaattagtctgtccttttg
gtgtttatgacctttgcaatgctactcctgtgctttggcagattactgtt
aggaaaaaaaaaagagctcaaagcacatgttgtgctgccggggtagctga
tctgatctgaaacattcagtcgctggaacgcataccctgtggggacacac
agaaacaaaaggaccctgcacgtcctggaataaatgggtatggacagcat
agattacttatgctgctcaacatttctacattaagaatgaggtcatttgt
gattttttaaacttcatttaattatttattgattcttttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_58024672_58025356
seq2: B6Ng01-169H12.b_575_1238 (reverse)

seq1  GACTCCCTTTGTTTGGAC-TTGA-AGACAGATGAAGGAAAAACCTTATTT  48
      || ||||||   |||||| |||| ||||||  |||||  |||||||| ||
seq2  GATTCCCTT--GTTGGACATTGAGAGACAG--GAAGG--AAACCTTACTT  44

seq1  TTGGAGTACCAAGCCATTCCAGTAATCCTAAAACACCTGAGAATATCCAG  98
      |  |||||||||| |||| |||| ||||||    ||||| |||||| |||
seq2  T--GAGTACCAAG-CATT-CAGT-ATCCTA----ACCTG-GAATATTCAG  84

seq1  TAAAGGGCTCTTATCCAATGTCATCGACAGCCTGCTTCAGATG-ACAG-T  146
      |||||||||| ||| | |||||||||||||||||| ||||||| |||| |
seq2  TAAAGGGCTC-TATACCATGTCATCGACAGCCTGC-TCAGATGAACAGAT  132

seq1  AG-AGTCAAGTAAGTTTTTATCTTGTATGTCTGTAAAGAAATGATGCTTG  195
      || |||| |||||| ||||||| |||| ||||||||||||||||||||||
seq2  AGAAGTC-AGTAAGATTTTATC-TGTA-GTCTGTAAAGAAATGATGCTTG  179

seq1  CGTTTCCCTCTGATCAGAACGTGTTAACCTCATACACCAGGCACTTCTGC  245
      ||||||||||||||||||||||||||  |||||||| |||||||||||||
seq2  CGTTTCCCTCTGATCAGAACGTGTTA--CTCATACA-CAGGCACTTCTGC  226

seq1  ACAGTGCTGTAAATGGTGGCTGTTTGGCAACTTGACACACGTGTCATACC  295
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACAGTGCTGTAAATGGTGGCTGTTTGGC-ACTTGACACACGTGTCATACC  275

seq1  TTGTTGTGTGCCCCAGCCCCCTGCCCTCCTCTGTGCCCCTTTACCAGCTG  345
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGTTGTGTGCCCCAGCCCCCTGCCCTCCTCTGTG-CCCTTTACCAGCTG  324

seq1  GCTTCGGTCTTCCTCCAGCTAGTCCTCCTTTGTCCCTTCCTAGCACGTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCGGTCTTCCTCCAGCTAGTCCTCCTTTGTCCCTTCCTAGCACGTTT  374

seq1  CCTGTTGTCATTCCTATTTCCCACATCCCCTGCAACCTCTTCCTCCCCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGTCATTCCTATTTCCCACATCCCCTGCAACCTCTTCCTCCCCTC  424

seq1  TCATGATTCCTTTTCTACTTCAGTATCCTGCAAAAACAAACATATAGCTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATTCCTTTTCTACTTCAGTATCCTGCAAAAACAAACATATAGCTA  474

seq1  TAGCTATATACCTGTGCACATAACCTAAAATGTAAGCTCCTGTATGAGAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATATACCTGTGCACATAACCTAAAATGTAAGCTCCTGTATGAGAA  524

seq1  ATAATGTGATCTTTGTCCCTGAGTCTGGTTTATTTCATTTTTCATAATTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGATCTTTGTCCCTGAGTCTGGTTTATTTCATTTTTCATAATTC  574

seq1  CATTTGCATCTGTTTTCAGAAAATGTCATGATCTTGTTTTTCTTTATGCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCATCTGTTTTCAGAAAATGTCATGATCTTGTTTTTCTTTATGCC  624

seq1  GTATAAAGTTCCCTCAAGTATGTGCATATGCCACGTTTTC  685
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAGTTCCCTCAAGTATGTGCATATGCCACGTTTTC  664

seq1: chr10_57897508_57898649
seq2: B6Ng01-169H12.g_68_1209

seq1  GAATTCAGTGTGAAGACTTAACTCCCAGGAGAACCAGAAGGACTCTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTGAAGACTTAACTCCCAGGAGAACCAGAAGGACTCTGTCA  50

seq1  GCTTGAAGTTCCTGTCCAGGAACACAATAGTCATTCTGGACCACAGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAAGTTCCTGTCCAGGAACACAATAGTCATTCTGGACCACAGCAGG  100

seq1  AAATATGAACCCCTGTACATCTTCAGGAGACACCTGCTCTGCAGCTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAACCCCTGTACATCTTCAGGAGACACCTGCTCTGCAGCTTCCC  150

seq1  CATGGCCCAGAGTGAGGCTGAGTTCTGTGTGGAGTGTGGAATCTCACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCCCAGAGTGAGGCTGAGTTCTGTGTGGAGTGTGGAATCTCACTGG  200

seq1  GGGGCTCCAAATAAAACAGTCCCATAAAAGTCCGACATGATCTGAGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCCAAATAAAACAGTCCCATAAAAGTCCGACATGATCTGAGACTG  250

seq1  CGAGAACTTCCCCTTGGTGGCGGACTGAGGAGGTATATAATGGATCTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAACTTCCCCTTGGTGGCGGACTGAGGAGGTATATAATGGATCTGTC  300

seq1  CTGCAGAGACGTGCCTAGTGCAGTGCCTAATTCATTAGAGTCATTCAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAGACGTGCCTAGTGCAGTGCCTAATTCATTAGAGTCATTCAGTC  350

seq1  AAATATCTGCTGGGAATTGATGGAACCGATCAGTTTTTTCAGATATCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTGCTGGGAATTGATGGAACCGATCAGTTTTTTCAGATATCAGT  400

seq1  AACAGTTTTTATGAGCCTGTGATCAGATCTTGAATACCAACAGTCTACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTTATGAGCCTGTGATCAGATCTTGAATACCAACAGTCTACAT  450

seq1  GGGTTCTACTACCATTCCAGTCACAACAATGGAGGCATGCAAGAAAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTACTACCATTCCAGTCACAACAATGGAGGCATGCAAGAAAAGAT  500

seq1  AGACGATGTTGTAGGCGCCACCTTATCTACAGGGATTCTGACCCAAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGATGTTGTAGGCGCCACCTTATCTACAGGGATTCTGACCCAAGACC  550

seq1  TACCCACAGTCCATTTGGCTACTATGCTATTTATTTATTTATTTATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACAGTCCATTTGGCTACTATGCTATTTATTTATTTATTTATTTAT  600

seq1  TTATTTATTTATTTGCAAGAAGGTATCAATTAGTCTGTCCTTTGGTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTTGCAAGAAGGTATCAATTAGTCTGTCCTTTGGTGTTT  650

seq1  ATGACCTTTGCAATGCTACTCCTGTATTTATTTATTTATTTATTTATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTTTGCAATGCTACTCCTGTATTTATTTATTTATTTATTTATTTA  700

seq1  TTTATTTA-TTTATTTGCAAG-AAGGTATCAATTAGTCTGTCC-TTTGGT  747
      |||||||| |||||||||||| ||||||||||||||||||||| ||||||
seq2  TTTATTTATTTTATTTGCAAGAAAGGTATCAATTAGTCTGTCCTTTTGGT  750

seq1  GTTTATGACCTTTGCAATGCTACTCCTGTATTTATTTATTTATTTATTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGACCTTTGCAATGCTACTCCTGTATTTATTTATTTATTTATTTA  800

seq1  TTTATTTATTTATTTATTTGCAAGAAGGTATCAATTAGTCTGTCC-TTTG  846
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTATTTATTTATTTATTTGCAAGAAGGTATCAATTAGTCTGTCCTTTTG  850

seq1  GTGTTTATGACCTTTGCAATGCTACTCCTGTGCTTTGG-AGA-TACTGTT  894
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  GTGTTTATGACCTTTGCAATGCTACTCCTGTGCTTTGGCAGATTACTGTT  900

seq1  AAGGACAAAAAAAGAGCTC-AAGCACATGTTGTGCTGCCGGGGTAGCTGA  943
      | | | ||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGGAAAAAAAAAAGAGCTCAAAGCACATGTTGTGCTGCCGGGGTAGCTGA  950

seq1  TCTGATTCTGAAACATTCAGTCGCTGGAACGCATACCCTGTGGGGACACA  993
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGA-TCTGAAACATTCAGTCGCTGGAACGCATACCCTGTGGGGACACA  999

seq1  CAG-AACAGAGGGACCCTGCACGTCCTGGATTAAATGGGTATGGACAGCA  1042
      ||| |||| | ||||||||||||||||||| |||||||||||||||||||
seq2  CAGAAACAAAAGGACCCTGCACGTCCTGGAATAAATGGGTATGGACAGCA  1049

seq1  TGAGATTACTTATGCTGCTCAACAATTTCTACAATTTAAG-ATGA-GTCA  1090
      | ||||||||||||||||||||| |||||||||  ||||| |||| ||||
seq2  T-AGATTACTTATGCTGCTCAAC-ATTTCTACA--TTAAGAATGAGGTCA  1095

seq1  TTTGTGAATTTTTTTAAACTTCATTTAATTTTATTTATTGATTCTTTGTG  1140
      |||||||  |||||||||||||||||||  ||||||||||||||||| ||
seq2  TTTGTGA--TTTTTTAAACTTCATTTAA--TTATTTATTGATTCTTT-TG  1140

seq1  AA  1142
      ||
seq2  AA  1142