BAC Information

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BAC

Clone NameB6Ng01-169J07
Chromosome10 (Build37)
Map Location 104,053,903 - 104,054,363
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169J07.bB6Ng01-169J07.g
ACCDH960522DH960523
length1,0271,030
definitionDH960522|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J07, 5' end.DH960523|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatctgaggaataccaaatggcagggaagcacctgaaaaaatg
ttcaacatccttaattatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagtatggctaagataaaaaattcaggtgacagc
agatgctggcaagtatgtggggaaagaggaatactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaattcctctcctgggc
atatatccagaagatgttccaactgataagaaggacacatgcctcactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggaaccaaaaaatgtggtacatttgcacattg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacacaatatgtactcagtgataagtggatattagcccattaac
ttagaatacccatgatataagatacaatttgctaaacacatgaaactcaa
gatgaatgaagaaaaaagtgtggacactttgccccttcttagaattgaga
acaaaacacccatggaaggagttatagagacacagtttggagctgagacg
aaaaaatggaccatctaggactgccatatccggggatccatcccataatc
agcttccaaatgctgacaccattccatacactagcaaaattttgctgaat
ggacccagatagagctctctgttatgagtctatgctgagacctagcatac
acagaagtggatgctcacagtcagctattggatggatcacaggccccaat
agaggagctagagaaagtaaccaaggagctaaagggatctgcaaccctat
aggtggacacaatatgaactacccatt

gaattcttttcaggaattttcttccctgtgcagaagtgtttgaggctgtt
tcctactttctcttctattagatttagcatatctggttttatgtggaggt
ccttgatccacttgcatttgagtttaatacaaggaggtaaatatgtatca
ctttgctttcttatactgcctattagaccagcaccatttgttgaaaatgt
tttcttttttctgtgaatcttcaattccataccgttaatctacctgtatg
tctctgtaccaatactatgtgattttatcactattgttctgtattacatc
ttcaggtcagggatggtaatttactctagaagttcttttattgttgagaa
ttgttttcactattctgggtgttttgttattctagatgaagttgagaatt
gctatgtctatctctgtgaagaactgagttggaattttgatgaggactac
attgaatctttatactgtcttttgcaagatggttatttttactgtgttaa
tccaaccagtccatttgcatgagagatctttctatcttctgagaacttca
acaatttctttcttcagagatttgaagttcttttcatacagatttatcac
ttgcttggttagagttataccaagattttttacattatttgtgactattt
taaaggttattattcacctaatttatttctcaccctgattatcctttgta
tagaggaatgctaccaatttgtttgagttaattttatatccagccacttt
gctagttgtttatcaggtgtaggagttgtctggtagtttttttggcgtct
cttcggtatactatcatatcacctgcaaatagtgataccttgacttcttc
tcttccaatttgtacccccttgactacatttttatttttttgtctgattg
ctagaacttcagtaccatattgaatgaatagggagagccttttcctgtcc
ctgattttagtggattgcttcaagtatctctctatttatttggatggtga
ctgttggtttggtcctttttcccccctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-169J07.b_46_516 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||||| |||| |||||||||||||||| ||  
seq2  TTTAATAGCTGAGTAGTACTCCAATGTGCAAATGTACCACATTTTTTGGT  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || ||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| ||||||  |||||||||||||||| | ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGAGGCATGTGTCCTTCTTATCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      |||  |||||||||||||||||||||| ||||| ||||| |||||||| |
seq2  TGGAACATCTTCTGGATATATGCCCAGGAGAGGAATTGCGGGATCCTCTG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTATTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
       |||||| || |||||||||||||||||||||||||||| ||||||||||
seq2  CCCACATACTTGCCAGCATCTGCTGTCACCTGAATTTTTTATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      | ||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TACTGACTGGTGTGAGGTGGAATCTTAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||| ||||||||||||||||||||||||||||||||| |||||||| |
seq2  CTGATAATTAAGGATGTTGAACATTTTTTCAGGTGCTTCCCTGCCATTTG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      ||||||||||| |||||||||
seq2  GTATTCCTCAGATGAGAATTC  471


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