BAC Information

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BAC

Clone NameB6Ng01-170B08
Chromosome10 (Build37)
Map Location 46,747,146 - 46,748,220
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100041632, LOC668252, LOC100042387, LOC100041663, LOC100042398
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170B08.bB6Ng01-170B08.g
ACCDH960887DH960888
length1,0761,246
definitionDH960887|Mus musculus domesticus DNA, BAC clone: B6Ng01-170B08, 5' end.DH960888|Mus musculus domesticus DNA, BAC clone: B6Ng01-170B08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcacccacaacaaataattaaacaatgaatgatccagacagaa
gacctttaaaatgttgccaaactctatttggataaacttaatgtttacat
caagcctaatgatttcatcagtcttaattataattgtggtttagtaaaag
actcacattcactaaaagtaatgaagaatgtgtcaaatgtttgaagagaa
acaattaaccactgcccaaatggttattgttttgcaaataatcagaaact
tggaaaaatgttagtcattgtgaaaatctgttgtctctcaaatgccagag
gtttctctctagagcagcctagtgtggccagttaagatttatgcattcct
gcattttatacataatcttatgctgttattatttagtttgaaaaatacag
atacaatttaaataatgtactcattattttaaaagtcagctgttaaaaca
tactcacttatataagactgtataaagcaaaatgtgcttaaaaggatatt
agttattttacatgtaaaattctcatttcttaattagtataaaagagtat
aaagtattgaaagtagtaaaatatgtgaaatagggggtcttgtaaatgtg
gaccaggagtttcttgattgatttgaatatgcaatgaaaataaacatagg
gagataattacattgtaatgtttatacagttaattgtaatgttatcaatt
atcatttttaaaaatatttccatagtttgacaaaagaaattttgtctaga
tatgatatcagtgttgaatagttagttagtgctgaatagtagtatcatga
ttatcaaagatctgttaaatttatcataatttattttgtaaatctaagtt
gttgggagaatattcttattccttaagatactgtgaagtgtatcttataa
attgatgtaaatactatttctctctctacaatatgccatgttgcctaatg
ttatttatgagatgaatatatcaagtctacatattaataagatattagat
gtttattatttgttaagaatcttcccatgattctatttaaatgatgtttt
gtttattttttaacaggtacaaaaat
gaattctttgttaagctctgtaccccattttttaatagtgttgtttaagt
tcctggagtccaacttcttaagttctttataatatattggatattagttc
cctatcagatttaggattggtaaagatcttttcccaatctgttggttgcc
tttcggtcttattgacagcatcctttgccttacagaagctttgcaatttt
atgaggtctgatttgttgataattgatcttacagaacaagccattggtgt
tccttcccctgtgctcatatctttgaggctcttcccaactttctcctcta
taagtttcagtgtctctggttttatgcagagttctttgatccacttagac
ttgagatttatacaaggagataataatgggttaattcacattcttctaca
tgctaaccaccagttgagccagcacaatttgttgaaagtgttctcttctt
tccactggacgatttcagctctttgtcaaagatcaaatgaccacagatgt
gtgggttcacttgtgggtcttcaattctgttccattgatctacctgtctg
tcactgtaccagtacaatgcagttttttttaaaattaggtattttcttca
tttacatttccaaggctatcccaaatgtcccccataccctccccccaact
cccctactcacccactcccactttttggccctggcgttcccctgtactgt
ggcatataaagtttgcaataccaatgggcctctctttccatgatggccta
ctaggccatattctgatacatatgcagctagagacatgagctctgggggc
tctggttagttcattgttgttccacctatagggttgcagagccctttagc
tctttgggtactttctctagctccttcattgggggccctgtgattcatcc
aatagctgactgtaagcatccacttctgtgtttgttagtcccagcattgg
cctcacagagacagctatatctgggtcctttcagcaaaatcttgctagta
tatgcaatggtgtcagcctttggaatttttaatcacatgctcttaagtac
atgtggaggtcagggaggggaattcccccccaggtccttaaatggttgaa
aaattttgctatcctaggatttggtattccagagaaataaaaatggccct
tcactctggagaaattgctgggatttatgcatgcttgaatcgcgatgctt
tggcgagtacatttgtctttaaatcatgccgtcagtataggagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_46747146_46748220
seq2: B6Ng01-170B08.b_47_1122 (reverse)

seq1  ATTTTTGTAACTGTT--AAAATTAAC-AAACATTCATTAAATAGAATCAT  47
      ||||||||| |||||  ||||| ||| ||||||   ||||||||||||| 
seq2  ATTTTTGTACCTGTTAAAAAATAAACAAAACATCATTTAAATAGAATCA-  49

seq1  TGAGAAGATTCTTAACAAATATATAACATCTAATATCTTATTAATATGTA  97
      || ||||||||||||||||||   ||||||||||||||||||||||||||
seq2  TGGGAAGATTCTTAACAAATAATAAACATCTAATATCTTATTAATATGTA  99

seq1  GACTTGATATTATTCATCTCATAAATAACATTAGGCAACATGGCATATTG  147
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGATA-TATTCATCTCATAAATAACATTAGGCAACATGGCATATTG  148

seq1  TAGAGAGAGAAATAGTATTTACATCAATTTATAAGATACACTTCACAGTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGAGAAATAGTATTTACATCAATTTATAAGATACACTTCACAGTA  198

seq1  TCTTAAGGAATAAGAATATTCTCCCAACAACTTAGATTTACAAAATAAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGGAATAAGAATATTCTCCCAACAACTTAGATTTACAAAATAAAT  248

seq1  TATGATAAATTTAACAGATCTTTGATAATCATGATACTACTATTCAGCAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAATTTAACAGATCTTTGATAATCATGATACTACTATTCAGCAC  298

seq1  TAACTAACTATTCAACACTGATATCATATCTAGACAAAATTTCTTTTGTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAACTATTCAACACTGATATCATATCTAGACAAAATTTCTTTTGTC  348

seq1  AAACTATGGAAATATTTTTAAAAATGATAATTGATAACATTACAATTAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATGGAAATATTTTTAAAAATGATAATTGATAACATTACAATTAAC  398

seq1  TGTATAAACATTACAATGTAATTATCTCCCTATGTTTATTTTCATTGCAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAACATTACAATGTAATTATCTCCCTATGTTTATTTTCATTGCAT  448

seq1  ATTCAAATCAATCAAGAAACTCCTGGTCCACATTTACAAGACCCCCTATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATCAATCAAGAAACTCCTGGTCCACATTTACAAGACCCCCTATT  498

seq1  TCACATATTTTACTACTTTCAATACTTTATACTCTTTTATACTAATTAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATATTTTACTACTTTCAATACTTTATACTCTTTTATACTAATTAAG  548

seq1  AAATGAGAATTTTACATGTAAAATAACTAATATCCTTTTAAGCACATTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAATTTTACATGTAAAATAACTAATATCCTTTTAAGCACATTTT  598

seq1  GCTTTATACAGTCTTATATAAGTGAGTATGTTTTAACAGCTGACTTTTAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATACAGTCTTATATAAGTGAGTATGTTTTAACAGCTGACTTTTAA  648

seq1  AATAATGAGTACATTATTTAAATTGTATCTGTATTTTTCAAACTAAATAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGAGTACATTATTTAAATTGTATCTGTATTTTTCAAACTAAATAA  698

seq1  TAACAGCATAAGATTATGTATAAAATGCAGGAATGCATAAATCTTAACTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCATAAGATTATGTATAAAATGCAGGAATGCATAAATCTTAACTG  748

seq1  GCCACACTAGGCTGCTCTAGAGAGAAACCTCTGGCATTTGAGAGACAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACTAGGCTGCTCTAGAGAGAAACCTCTGGCATTTGAGAGACAACA  798

seq1  GATTTTCACAATGACTAACATTTTTCCAAGTTTCTGATTATTTGCAAAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCACAATGACTAACATTTTTCCAAGTTTCTGATTATTTGCAAAAC  848

seq1  AATAACCATTTGGGCAGTGGTTAATTGTTTCTCTTCAAACATTTGACACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCATTTGGGCAGTGGTTAATTGTTTCTCTTCAAACATTTGACACA  898

seq1  TTCTTCATTACTTTTAGTGAATGTGAGTCTTTTACTAAACCACAATTATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATTACTTTTAGTGAATGTGAGTCTTTTACTAAACCACAATTATA  948

seq1  ATTAAGACTGATGAAATCATTAGGCTTGATGTAAACATTAAGTTTATCCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGACTGATGAAATCATTAGGCTTGATGTAAACATTAAGTTTATCCA  998

seq1  AATAGAGTTTGGCAACATTTTAAAGGTCTTCTGTCTGGATCATTCAATGT  1047
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATAGAGTTTGGCAACATTTTAAAGGTCTTCTGTCTGGATCATTCATTGT  1048

seq1  TTAATTATTTGTTGTGGGTGCTGAATTC  1075
      ||||||||||||||||||||||||||||
seq2  TTAATTATTTGTTGTGGGTGCTGAATTC  1076