BAC Information

Click to search

BAC

Clone NameB6Ng01-171E06
Chromosome10 (Build37)
Map Location 45,781,618 - 45,782,704
singlet/doubletsinglet
Overlap genenone
Upstream genePrep, Popdc3, Bves, Lin28b, Dbil5-ps, LOC100042364, Hace1, LOC664781
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171E06.bB6Ng01-171E06.g
ACCGA000197GA000198
length1,077307
definitionB6Ng01-171E06.b B6Ng01-171E06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgccttggtttgttaaaccttgttgttggggcactcatggac
cccacatgtctttgaggatttatatacagagtatgattcagaggaattgc
ttcagtgaaacagacataagaaaggtgcacatgcttttaaaaacaaactc
ccactgttgcccctgtaaacagtacaaatgatactcattgggccacatat
ttgtgtacacacacacacacacacacacatacacacacaaacacaaggga
gagactcaaaacatatagagagacctggaagaagaggaagaagatgatga
agaaaggagtaattggaaaaaatgggaaaaatgaataagtttacaggaat
aagtgtaattgaagtaaacttaagtgcaagtatgaaaatatcatgttaaa
acgttttatggaatatataataattaaagtaaaaatgtgagaaagagtgg
aataatattttaggaataataccatgtttacacaccatataggagttttt
tttttaatagaagatacaatgaggaacttattgactttatagcaaagcaa
tgggccaaggtcacctctacaaaatgagctgagttgatattagcagcaat
gggctgatggtctgtgcctcttgacatgatctgtgtcgacggagcacgta
cctcacctttgttgtgttttctgtaccagtgcgtagttgagtctactcaa
gaggaaacctcagttacatttagcataaagtacagcccagagttggatga
cctgcgtcctttaaaaccagttgtagttacagaagggaaagaagatagga
cgtgcagaacttccagtgaactaaaagcctttgcaattctaaaactgagt
ttaggatgaattttagaaacagttttagtagaagttcattagtagacaag
aaaatagtttgggtacaatattgttatctaagctacagatttatactttt
ttttttttggtctatcttcatgggtacctacccatgtatttactgtagta
attactagttgatatctctagtaaatactgactctgagtgacagtaattc
agttaatagaactctcaaataaatatt

actatgtagaccaaactggcctcaaactcaaagagatccacctgcctttg
gcctacccagtgctgggattaaaggtatataacagtatgcctggatcctc
ttgattgtgttttgggggttgtttgtttgtttgtttgtttaaaactgctt
tggtgattacacatggagagactcatggcaccagctgcatatgtagctga
ggatggccttgtaggtcatcaatgggaggagaggcccttggtcctgtgaa
gactctatgccccagtatagggaaataccagggccaggaagtgggagtgg
gtgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45781618_45782704
seq2: B6Ng01-171E06.b_42_1118

seq1  GAATTCAATGCCTTGGTTTGTTAAACCTTGTTGTTGGGGCACTCATGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCCTTGGTTTGTTAAACCTTGTTGTTGGGGCACTCATGGAC  50

seq1  CCCACATGTCTTTGAGGATTTATATACAGAGTATGATTCAGAGGAATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATGTCTTTGAGGATTTATATACAGAGTATGATTCAGAGGAATTGC  100

seq1  TTCAGTGAAACAGACATAAGAAAGGTGCACATGCTTTTAAAAACAAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGAAACAGACATAAGAAAGGTGCACATGCTTTTAAAAACAAACTC  150

seq1  CCACTGTTGCCCCTGTAAACAGTACAAATGATACTCATTGGGCCACATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTTGCCCCTGTAAACAGTACAAATGATACTCATTGGGCCACATAT  200

seq1  TTGTGTACACACACACACACACACACACATACACACACAAACACAAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTACACACACACACACACACACACATACACACACAAACACAAGGGA  250

seq1  GAGACTCAAAACATATAGAGAGACCTGGAAGAAGAGGAAGAAGATGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTCAAAACATATAGAGAGACCTGGAAGAAGAGGAAGAAGATGATGA  300

seq1  AGAAAGGAGTAATTGGAAAAAATGGGAAAAATGAATAAGTTTACAGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAGTAATTGGAAAAAATGGGAAAAATGAATAAGTTTACAGGAAT  350

seq1  AAGTGTAATTGAAGTAAACTTAAGTGCAAGTATGAAAATATCATGTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAATTGAAGTAAACTTAAGTGCAAGTATGAAAATATCATGTTAAA  400

seq1  ACGTTTTATGGAATATATAATAATTAAAGTAAAAATGTGAGAAAGAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTTATGGAATATATAATAATTAAAGTAAAAATGTGAGAAAGAGTGG  450

seq1  AATAATATTTTAGGAATAATACCATGTTTACACACCATATAGGAGTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATTTTAGGAATAATACCATGTTTACACACCATATAGGAGTTTTT  500

seq1  TTTTTAATAGAAGATACAATGAGGAACTTATTGACTTTATAGCAAAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATAGAAGATACAATGAGGAACTTATTGACTTTATAGCAAAGCAA  550

seq1  TGGGCCAAGGTCACCTCTACAAAATGAGCTGAGTTGATATTAGCAGCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCAAGGTCACCTCTACAAAATGAGCTGAGTTGATATTAGCAGCAAT  600

seq1  GGGCTGATGGTCTGTGCCTCTTGACATGATCTGTGTCGACGGAGCACGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGATGGTCTGTGCCTCTTGACATGATCTGTGTCGACGGAGCACGTA  650

seq1  CCTCACCTTTGTTGTGTTTTCTGTACCAGTGCGTAGTTGAGTCTACTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCTTTGTTGTGTTTTCTGTACCAGTGCGTAGTTGAGTCTACTCAA  700

seq1  GAGGAAACCTCAGTTACATTTAGCATAAAGTACAGCCCAGAGTTGGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACCTCAGTTACATTTAGCATAAAGTACAGCCCAGAGTTGGATGA  750

seq1  CCTGCGTCCTTTAAAACCAGTTGTAGTTACAGAAGGGAAAGAAGATAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGTCCTTTAAAACCAGTTGTAGTTACAGAAGGGAAAGAAGATAGGA  800

seq1  CGTGCAGAACTTCCAGTGAACTAAAAGCCTTTGCAATTCTAAAACTGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCAGAACTTCCAGTGAACTAAAAGCCTTTGCAATTCTAAAACTGAGT  850

seq1  TTAGGATGAATTTTAGAAACAGTTTTAGTAGAAGTTCATTAGTAGACAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATGAATTTTAGAAACAGTTTTAGTAGAAGTTCATTAGTAGACAAG  900

seq1  AAAATAGTTT-GGTACAATATTGTTATCTAAGCTACAGATTTTATAC--T  947
      |||||||||| |||||||||||||||||||||||||||| |||||||  |
seq2  AAAATAGTTTGGGTACAATATTGTTATCTAAGCTACAGA-TTTATACTTT  949

seq1  TTTTTTTTTGGTCTATCTTCAT-GGTACCTACCCATGTAATTTACTGTAG  996
      |||||||||||||||||||||| ||||||||||||||| |||||||||||
seq2  TTTTTTTTTGGTCTATCTTCATGGGTACCTACCCATGT-ATTTACTGTAG  998

seq1  TAATTACTAGTTTGATATCTCTAAGTAAAATTACTGACTTCTGAGTGACC  1046
      |||||||||| ||||||||||| ||||||  ||||||| ||||||||| |
seq2  TAATTACTAG-TTGATATCTCT-AGTAAA--TACTGAC-TCTGAGTGA-C  1042

seq1  AGTAATTTTCCAGTTAATAGAAACTTCTCAATATAAATATT  1087
      |||||||   ||||||||||||   |||||| |||||||||
seq2  AGTAATT---CAGTTAATAGAA--CTCTCAA-ATAAATATT  1077


| Home | SequenceCutter | Blast | Download |