BAC Information

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BAC

Clone NameB6Ng01-171G13
Chromosome10 (Build37)
Map Location 129,796,535 - 129,797,655
singlet/doubletsinglet
Overlap gene5830405N20Rik
Upstream geneOlfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4
Downstream geneEG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171G13.bB6Ng01-171G13.g
ACCGA000303GA000304
length1,1971,114
definitionB6Ng01-171G13.b B6Ng01-171G13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccatgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatttgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaatttctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatccttccatctt
ctgagatcttctttaattttcttttcttcagagacttgaagtttttatca
tacagatctttcacttccttagttagagtcacgccgattattttatatta
ttttgtgactattgaagaaaaaggtgttgtttcccttaatttctttctca
gctgtttaattctttgtggtaaaagaaggccaatgactgttgagttattt
tatatccagctactttcaccgaagctgtttatcaagttaaggagtcttct
gttaagattttaggttcacttatatatcttatcatatacacctgcaagtg
aatttggactcctcgtttcgcatagtattctccgtggaattcaccgt
gaattcataatatctgtgaaggtttgagtaacaatggcccccatagactc
atatatatgaatacttagtcactagagagtattgctatttgaaaggatta
gaatgaataggtgtggccttgttggaggaagcatgccagtggaggtgagc
tttgagttttcaaaatcccatgccaggcctaggctctctttctttcagcc
tgtggaacaggatttagctctagacaactatttcagcaccatgcgtgctg
ccatgctctccaccaagaggacaatggactaaacctctgaaactgtaagc
aagctcccaattaacatttgttttttttttttttaaataagagttgcttt
ggtcatggtgttatggtgttttttcacagctacagaacagtgactagagc
aatacttaatagtattgtagctttgaaaagagctgttaatatttgaacct
aatttctgtgtctggaggcatggggaagtatattccagttctgtttataa
aaaaaaattagcatagagctttgaaccgtttctacagcagaaaacaaatc
taaatgaagatgaaagctctttgcaggtgaaaagcaatacagagcaaaga
aatatgtctgcattgtcagctcctggctgtacactgttgtagatctgatt
tttgtcatgttctttggagtttgtcactgtacttgccttagaagtttctg
tgagacaactaaacaattagtgtaaaagacctcaggtgattccacctcac
accagtcagaatggctaagatcaaaaattcaggtgacagcagatgctggc
gaggatgtggagaaagaggaacactcctccattgttggtgggattgcagg
gttgtacaaccactctggaaatcagtctggcagttcctcagaaaatttgg
acatagtactatcgggaggatccagccatacctcctcctgggcatatatc
cagaagaacgcccaaactggtaagaggacacatgctccactatgttcata
agcagccttatttataatagccagaagctggaagaacccagatgccctca
acagagatgatacaggaaagtgtactctaccaatggagtcctctcagcta
taaaagaatgaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129796535_129797655
seq2: B6Ng01-171G13.g_64_1177 (reverse)

seq1  AATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCA  50
      |||||||||||||  ||||||||| || ||||||||| ||||| ||| ||
seq2  AATTCATTCTTTT--ATAGCTGAG-AGGACTCCATTG-GTAGA-GTA-CA  44

seq1  CTTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCT  100
      |||| |||||| |||  ||||||||| |||||||||||||| ||||||||
seq2  CTTTCCTGTAT-CAT--CTCTGTTGA-GGGCATCTGGGTTC-TTCCAGCT  89

seq1  TCTGGCTATTATAAATAAGGCTGC-TATGAACATAGTGGAGCATGTGTCC  149
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTGGCTATTATAAATAAGGCTGCTTATGAACATAGTGGAGCATGTGTCC  139

seq1  TTCTTACCAGTTGGGGCG-TCTTCTGGATATATGCCCAGGA-GAGGTATT  197
       ||||||||||| ||||| |||||||||||||||||||||| ||||||| 
seq2  -TCTTACCAGTTTGGGCGTTCTTCTGGATATATGCCCAGGAGGAGGTATG  188

seq1  GCTGGATCCT-CCGGTAGTACTATGTCC-AATTTTCTGAGGAACTGCCAG  245
      |||||||||| ||| ||||||||||||| |||||||||||||||||||||
seq2  GCTGGATCCTCCCGATAGTACTATGTCCAAATTTTCTGAGGAACTGCCAG  238

seq1  ACTGATTTCCAGAGTGGTTGTACAACCCTGCAATCCCACCAACAATGGAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTTCCAGAGTGGTTGTACAACCCTGCAATCCCACCAACAATGGAG  288

seq1  GAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAAT  338

seq1  TTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCACCTGAGGTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCACCTGAGGTCT  388

seq1  TTTACACTAATTGTTTAGTTGTCTCACAGAAACTTCTAAGGCAAGTACAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACTAATTGTTTAGTTGTCTCACAGAAACTTCTAAGGCAAGTACAG  438

seq1  TGACAAACTCCAAAGAACATGACAAAAATCAGATCTACAACAGTGTACAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAACTCCAAAGAACATGACAAAAATCAGATCTACAACAGTGTACAG  488

seq1  CCAGGAGCTGACAATGCAGACATATTTCTTTGCTCTGTATTGCTTTTCAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCTGACAATGCAGACATATTTCTTTGCTCTGTATTGCTTTTCAC  538

seq1  CTGCAAAGAGCTTTCATCTTCATTTAGATTTGTTTTCTGCTGTAGAAACG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAGAGCTTTCATCTTCATTTAGATTTGTTTTCTGCTGTAGAAACG  588

seq1  GTTCAAAGCTCTATGCTAATTTTTTTTTATAAACAGAACTGGAATATACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAGCTCTATGCTAATTTTTTTTTATAAACAGAACTGGAATATACT  638

seq1  TCCCCATGCCTCCAGACACAGAAATTAGGTTCAAATATTAACAGCTCTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATGCCTCCAGACACAGAAATTAGGTTCAAATATTAACAGCTCTTT  688

seq1  TCAAAGCTACAATACTATTAAGTATTGCTCTAGTCACTGTTCTGTAGCTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTACAATACTATTAAGTATTGCTCTAGTCACTGTTCTGTAGCTG  738

seq1  TGAAAAAACACCATAACACCATGACCAAAGCAACTCTTATTTAAAAAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAACACCATAACACCATGACCAAAGCAACTCTTATTTAAAAAAAA  788

seq1  AAAAAACAAATGTTAATTGGGAGCTTGCTTACAGTTTCAGAGGTTTAGTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAATGTTAATTGGGAGCTTGCTTACAGTTTCAGAGGTTTAGTC  838

seq1  CATTGTCCTCTTGGTGGAGAGCATGGCAGCACGCATGGTGCTGAAATAGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCCTCTTGGTGGAGAGCATGGCAGCACGCATGGTGCTGAAATAGT  888

seq1  TGTCTAGAGCTAAATCCTGTTCCACAGGCTGAAAGAAAGAGAGCCTAGGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGAGCTAAATCCTGTTCCACAGGCTGAAAGAAAGAGAGCCTAGGC  938

seq1  CTGGCATGGGATTTTGAAAACTCAAAGCTCACCTCCACTGGCATGCTTCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATGGGATTTTGAAAACTCAAAGCTCACCTCCACTGGCATGCTTCC  988

seq1  TCCAACAAGGCCACACCTATTCATTCTAATCCTTTCAAATAGCAATACTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAAGGCCACACCTATTCATTCTAATCCTTTCAAATAGCAATACTC  1038

seq1  TCTAGTGACTAAGTATTCATATATATGAGTCTATGGGGGCCATTGTTACT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGACTAAGTATTCATATATATGAGTCTATGGGGGCCATTGTTACT  1088

seq1  CAAACCTTCACAGATATTATGAATTC  1121
      ||||||||||||||||||||||||||
seq2  CAAACCTTCACAGATATTATGAATTC  1114