BAC Information

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BAC

Clone NameB6Ng01-171K15
Chromosome10 (Build37)
Map Location 113,322,130 - 113,453,369
singlet/doubletdoublet
Overlap genenone
Upstream gene4921506J03Rik, LOC100042655, LOC100042666
Downstream geneTrhde, 4930473D10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171K15.bB6Ng01-171K15.g
ACCGA000485GA000486
length8911,149
definitionB6Ng01-171K15.b B6Ng01-171K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,322,130 - 113,322,941)(113,452,206 - 113,453,369)
sequence
gaattcaagaacgaggtcttaatagtaggtgattggctctttactttgag
aattcaacttcagcccaattttccagacattgaaaccaatcgtgtcctga
gatcttcacataatggttgaatcgtttgcaaattcatacgggtacactga
aatatcttaggtaaaggatattcatagggtagtgtgaaggaaagtgtatg
cctcaataattgcactgttacctaagtttagatgcagttctaataacact
gtaggtttcccaagtctgtttttaaaactacacttgtataataagataca
ttgttttgaaaactgttttttttttcactccggaatttatccccctcctg
gttcaccctctgactgctccctatcccatacctcctcctcaccccatgtc
tccacaaagatgtccccatcccctacccccacctcaccaggtaagcaata
gagacaccatggtaacttgtgtctctgtaactatcagtcttcataagttc
tccattattaggcttccagttttttgagagttaggtacatctcttctgac
tgaactcaaacctggcagtcctctgctgtatatgtattgggggcctcata
tcatctccctggatggtggtccagtgtctgagtaatctcaggagtccagg
ttaattgagactgctggtcctttgacccatactttttaagtagagagctg
ttcactttccatgactttgtaagtttacattccagaattcaatgagaata
agtacaaagcctacccaaacttatgggacataatgaaagcagtgcaaaga
ggtaactttactgcactgaatgcctacttaaaataattggagcgattttg
cactggcaacttaatagctaatagctaatacctaaaagctc

gaattcctgtaataagcagatataacaaagatacctaagaatcctcagac
aacttgaatccagaggaacatcttagatttcagctcaaatgtctccatgc
aggtcaggccaagaaactatcatgtttattatgatgagatgtttttatga
caaacgtgactatggtgaatgtttgtcttcatggtgcctgcatagagata
tctatcattaaatgctgataataaaaaacaaaaaaaatagaatggagaaa
agattgaaagagaagggatacaggtttcattggtgttgaaatatgaacaa
acttaactttattagaaaaataaatctgcagtagtatttgcaaaataact
tctcatagttcctttcaattagggagtcaaatttcacttaatctcattca
atgtaggcaacatttcagaggaattcttgtggagtataattgccacttct
aatattatgataactactaatgccatgttgtaactttttctattctttta
aattggtattttcaatgaactataactaagccgtacaccagaacattttc
tgcacaaacattctgcacttttggggtcagcattgtctgtgctggacact
ttcttagctattggaaatataggtggacaggtgttcatagagtttggttt
gccacagcattaaatatatcagtagtctgaaagtttgtctgaatatttga
atgaaatcatggtaattgttgtaatatgttgtagttatataaatatcata
tgcatgtatatatcctgcatggagttctgaggagattttcttttgcttct
tttgtgctcgggacctttaccagagcatcttctaaaagcttgttataaga
ggaagtgtctctgtgtccatttagactcccaatgtcttgctggaaagaga
atactgtattagaaaaatattaaggattggattacctcactcaggataat
gcccttcaggtccaccaatttgactaggaatttcaataaatcattcttta
ttagctgatagtactcattggttatgtaacagattttctgtatcaattct
ctgtgagggcattctggattctttcagcttctgcctattataataggctg
ccatgaactattgcaacagtgtccttctaccagttgcaacatcttctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_113322130_113322941
seq2: B6Ng01-171K15.b_36_847

seq1  GAATTCAAGAACGAGGTCTTAATAGTAGGTGATTGGCTCTTTACTTTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAACGAGGTCTTAATAGTAGGTGATTGGCTCTTTACTTTGAG  50

seq1  AATTCAACTTCAGCCCAATTTTCCAGACATTGAAACCAATCGTGTCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAACTTCAGCCCAATTTTCCAGACATTGAAACCAATCGTGTCCTGA  100

seq1  GATCTTCACATAATGGTTGAATCGTTTGCAAATTCATACGGGTACACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCACATAATGGTTGAATCGTTTGCAAATTCATACGGGTACACTGA  150

seq1  AATATCTTAGGTAAAGGATATTCATAGGGTAGTGTGAAGGAAAGTGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTAGGTAAAGGATATTCATAGGGTAGTGTGAAGGAAAGTGTATG  200

seq1  CCTCAATAATTGCACTGTTACCTAAGTTTAGATGCAGTTCTAATAACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATAATTGCACTGTTACCTAAGTTTAGATGCAGTTCTAATAACACT  250

seq1  GTAGGTTTCCCAAGTCTGTTTTTAAAACTACACTTGTATAATAAGATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTTCCCAAGTCTGTTTTTAAAACTACACTTGTATAATAAGATACA  300

seq1  TTGTTTTGAAAACTGTTTTTTTTTTCACTCCGGAATTTATCCCCCTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGAAAACTGTTTTTTTTTTCACTCCGGAATTTATCCCCCTCCTG  350

seq1  GTTCACCCTCTGACTGCTCCCTATCCCATACCTCCTCCTCACCCCATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCCTCTGACTGCTCCCTATCCCATACCTCCTCCTCACCCCATGTC  400

seq1  TCCACAAAGATGTCCCCATCCCCTACCCCCACCTCACCAGGTAAGCAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAAGATGTCCCCATCCCCTACCCCCACCTCACCAGGTAAGCAATA  450

seq1  GAGACACCATGGTAACTTGTGTCTCTGTAACTATCAGTCTTCATAAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACCATGGTAACTTGTGTCTCTGTAACTATCAGTCTTCATAAGTTC  500

seq1  TCCATTATTAGGCTTCCAGTTTTTTGAGAGTTAGGTACATCTCTTCTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATTAGGCTTCCAGTTTTTTGAGAGTTAGGTACATCTCTTCTGAC  550

seq1  TGAACTCAAACCTGGCAGTCCTCTGCTGTATATGTATTGGGGGCCTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAAACCTGGCAGTCCTCTGCTGTATATGTATTGGGGGCCTCATA  600

seq1  TCATCTCCCTGGATGGTGGTCCAGTGTCTGAGTAATCTCAGGAGTCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCCCTGGATGGTGGTCCAGTGTCTGAGTAATCTCAGGAGTCCAGG  650

seq1  TTAATTGAGACTGCTGGTCCTTTGACCCATACTTTTTAAGTAGAGAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGAGACTGCTGGTCCTTTGACCCATACTTTTTAAGTAGAGAGCTG  700

seq1  TTCACTTTCCATGACTTTGTAAGTTTACATTCCAGAATTCAATGAGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTCCATGACTTTGTAAGTTTACATTCCAGAATTCAATGAGAATA  750

seq1  AGTACAAAGCCTACCCAAACTTATGGGACATAATGAAAGCAGTGCAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAAGCCTACCCAAACTTATGGGACATAATGAAAGCAGTGCAAAGA  800

seq1  GGTAACTTTACT  812
      ||||||||||||
seq2  GGTAACTTTACT  812


seq1: chr10_113452206_113453369
seq2: B6Ng01-171K15.g_66_1214 (reverse)

seq1  CCAGAAGATGTTCCAACTAGTAAGAAAGACACATGTTCCACTATGTTCAT  50
      |||||||||||| ||||| || |||| ||||| |||| || || ||||||
seq2  CCAGAAGATGTTGCAACTGGT-AGAAGGACAC-TGTTGCAATA-GTTCAT  47

seq1  AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCT  100
       |||||||   ||||||||| |||||||| ||||||| |||||   ||||
seq2  GGCAGCCT--ATTATAATAGGCAGAAGCT-GAAAGAATCCAGAATGCCCT  94

seq1  CAACAGAGGAATGGATACAGAAAATCTGGTACATTTACACAATGGAGTAC  150
      | ||||| |||| ||||||||||||||| ||||  ||  |||| ||||||
seq2  C-ACAGA-GAATTGATACAGAAAATCTGTTACA--TAACCAAT-GAGTAC  139

seq1  TACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGTCAAATGGTT  200
      || |||||||  | ||||||||| ||  |||||||||||||||||| | |
seq2  TA-TCAGCTA--ATAAAGAATGATTTATTGAAATTCCTAGTCAAATTGGT  186

seq1  GGACCTGGAGGGCATTATCCTGAGTGAGGTAATCCAATCCTTAATATTTT  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGAAGGGCATTATCCTGAGTGAGGTAATCCAATCCTTAATATTTT  236

seq1  TCTAATACAGTATTCTCTTTCCCAGCAAGACATTGGGAGTCTAAATGGAC  300
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTAATACAGTATTCTCTTT-CCAGCAAGACATTGGGAGTCTAAATGGAC  285

seq1  ACAGAGACACTTCCTCTTATAACAAGCTTTTAGAAGATGCTCTGGTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACACTTCCTCTTATAACAAGCTTTTAGAAGATGCTCTGGTAAAG  335

seq1  GTCCCGAGCACAAAAGAAGCAAAAGAAAATCTCCTCAGAACTCCATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCGAGCACAAAAGAAGCAAAAGAAAATCTCCTCAGAACTCCATGCAG  385

seq1  GATATATACATGCATATGATATTTATATAACTACAACATATTACAACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATACATGCATATGATATTTATATAACTACAACATATTACAACAAT  435

seq1  TACCATGATTTCATTCAAATATTCAGACAAACTTTCAGACTACTGATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGATTTCATTCAAATATTCAGACAAACTTTCAGACTACTGATATA  485

seq1  TTTAATGCTGTGGCAAACCAAACTCTATGAACACCTGTCCACCTATATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCTGTGGCAAACCAAACTCTATGAACACCTGTCCACCTATATTT  535

seq1  CCAATAGCTAAGAAAGTGTCCAGCACAGACAATGCTGACCCCAAAAGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGCTAAGAAAGTGTCCAGCACAGACAATGCTGACCCCAAAAGTGC  585

seq1  AGAATGTTTGTGCAGAAAATGTTCTGGTGTACGGCTTAGTTATAGTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTTGTGCAGAAAATGTTCTGGTGTACGGCTTAGTTATAGTTCAT  635

seq1  TGAAAATACCAATTTAAAAGAATAGAAAAAGTTACAACATGGCATTAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATACCAATTTAAAAGAATAGAAAAAGTTACAACATGGCATTAGTA  685

seq1  GTTATCATAATATTAGAAGTGGCAATTATACTCCACAAGAATTCCTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCATAATATTAGAAGTGGCAATTATACTCCACAAGAATTCCTCTGA  735

seq1  AATGTTGCCTACATTGAATGAGATTAAGTGAAATTTGACTCCCTAATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGCCTACATTGAATGAGATTAAGTGAAATTTGACTCCCTAATTGA  785

seq1  AAGGAACTATGAGAAGTTATTTTGCAAATACTACTGCAGATTTATTTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACTATGAGAAGTTATTTTGCAAATACTACTGCAGATTTATTTTTC  835

seq1  TAATAAAGTTAAGTTTGTTCATATTTCAACACCAATGAAACCTGTATCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGTTAAGTTTGTTCATATTTCAACACCAATGAAACCTGTATCCC  885

seq1  TTCTCTTTCAATCTTTTCTCCATTCTATTTTTTTTGTTTTTTATTATCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTCAATCTTTTCTCCATTCTATTTTTTTTGTTTTTTATTATCAG  935

seq1  CATTTAATGATAGATATCTCTATGCAGGCACCATGAAGACAAACATTCAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATGATAGATATCTCTATGCAGGCACCATGAAGACAAACATTCAC  985

seq1  CATAGTCACGTTTGTCATAAAAACATCTCATCATAATAAACATGATAGTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTCACGTTTGTCATAAAAACATCTCATCATAATAAACATGATAGTT  1035

seq1  TCTTGGCCTGACCTGCATGGAGACATTTGAGCTGAAATCTAAGATGTTCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCCTGACCTGCATGGAGACATTTGAGCTGAAATCTAAGATGTTCC  1085

seq1  TCTGGATTCAAGTTGTCTGAGGATTCTTAGGTATCTTTGTTATATCTGCT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTCAAGTTGTCTGAGGATTCTTAGGTATCTTTGTTATATCTGCT  1135

seq1  TATTACAGGAATTC  1164
      ||||||||||||||
seq2  TATTACAGGAATTC  1149


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