BAC Information

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BAC

Clone NameB6Ng01-171M13
Chromosome10 (Build37)
Map Location 26,090,501 - 26,090,916
singlet/doubletsinglet
Overlap geneL3mbtl3
Upstream geneEpb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3
Downstream geneLOC435208, LOC667572, LOC100040349, Arhgap18, Lama2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-171M13.bB6Ng01-171M13.g
ACCGA000573GA000574
length108409
definitionB6Ng01-171M13.b B6Ng01-171M13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttacatgattggttgcttttttcctacagctcatatgtcaatccccctgc
ttctgcatcgtggtgatttcctcccccctcctcctcctccttctctcctc
ctccacca

ttactggcggttcagttcctttttttttttttttttctactgaaaacaat
tgattgatcgattgaaaaagtggggaatccagaacaaagcagtagtgaat
caattaataccttctataggtggatatacaatggtagggaagagacagga
gctttaaatgcctttgcagcctgagctacaattttgtagctaaaatttat
gacagtttggggggggggggttaattaacatgtaattaacatttaagtga
ctcctatgaagaagcccttcttctgccagagaccatgtcttagggatgta
gcatagacttaggaatttttgaaaacatttctatgggaatatagaaatgt
tgtctaataagttctttttggttatcctggagggtactggtttactccca
actaataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_26090501_26090916
seq2: B6Ng01-171M13.g_67_481 (reverse)

seq1  ATTATTTGTTGGGAGTAAACCAGTACCCTCCAGGATAACCAAAAAGAACT  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAGTTGGGAGTAAACCAGTACCCTCCAGGATAACCAAAAAGAACT  50

seq1  TATTAGACAACATTTCTATATTCCCATAGAAATGTTTTCAAAAATTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGACAACATTTCTATATTCCCATAGAAATGTTTTCAAAAATTCCTA  100

seq1  AGTCTATGCTACATCCCTAAGACATGGTCTCTGGCAGAAGAAGGGCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGCTACATCCCTAAGACATGGTCTCTGGCAGAAGAAGGGCTTCT  150

seq1  TCATAGGAGTCACTTAAATGTTAATTACATGTTAATTAACCCCCCCCCCC  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCATAGGAGTCACTTAAATGTTAATTACATGTTAATTAA-CCCCCCCCCC  199

seq1  CCAAACTGTCATAAATTTTAGCTACAAAATTGTAGCTCAGGCTGCAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGTCATAAATTTTAGCTACAAAATTGTAGCTCAGGCTGCAAAGG  249

seq1  CATTTAAAGCTCCTGTCTCTTCCCTACCATTGTATATCCACCTATAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAGCTCCTGTCTCTTCCCTACCATTGTATATCCACCTATAGAAG  299

seq1  GTATTAATTGATTCACTACTGCTTTGTTCTGGATTCCCCACTTTTTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAATTGATTCACTACTGCTTTGTTCTGGATTCCCCACTTTTTCAAT  349

seq1  CGATCAATCAATTGTTTTCAGTAGAAAAAAAAAAAAAAAAAGGAACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCAATCAATTGTTTTCAGTAGAAAAAAAAAAAAAAAAAGGAACTGAA  399

seq1  CCGCCAGTAAGAATTC  416
      ||||||||||||||||
seq2  CCGCCAGTAAGAATTC  415


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