BAC Information

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BAC

Clone NameB6Ng01-172O23
Chromosome10 (Build37)
Map Location 35,198,361 - 35,199,427
singlet/doubletsinglet
Overlap genenone
Upstream geneFrk, LOC667824
Downstream geneLOC100041585, LOC667860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-172O23.bB6Ng01-172O23.g
ACCGA001422GA001423
length1,1251,067
definitionB6Ng01-172O23.b B6Ng01-172O23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtctagctctgctccccaattttaatagggttgtttggttt
tctggagtccaaattcttgagttctttatatatataggataatagcccac
tatcagatttaggattggtaaagatctttttctaatctgttggttatctt
tttgtcttattgacagtgtcctttgccttacagaagctttgcaagtttat
gagttcccatttgttgattcttgatcttagagcacataccattgctgtac
tgttttggaattttcccctgtgcccatatctttgacgctcttccccactt
tctcctctataagtttcagtgcctgtggctttgtgtggagttccttgatc
cacttagacttgaactttgtacaaggaaataagaatggatcaattcacat
tcttctacattctaactgccagttgagccagcaccatttattgaagatgt
tgtcttctttccactggatggttttagctcctttgtcaaaggtcaagtga
ccataggtgtgctgattaatttctggatctttgattctgttccattgacc
atcctgtctttcactgtactagtaccagacagctttttatcacagttgct
ctgaagtacagcttgaggtcagggatggtgattccaccagaggttcttac
attgttaagaatagtttttgctatcctaagtttttactattccagatgaa
tttgcaaatcgctctttgtacctctatgagcatgggagatctgtccatct
tctgagatcttcttcaatttctttcttcagagaactgaagttcttatcat
accgatctttcacttccttagttagagtcacaccaaggtattttatatta
tctgtgactattttgaaggtgttatttcccatgattctttcttagactgt
ttatcctttgtgtagagaaaggccactgaattgtttgagttaattttata
tccagctatttcactgaagtttgtctatcaaggtttagggaattcttatg
gaataaattttttgggtccaccttaaatatactaagaattcatctggcat
gggatatttggacttccatcccttctaattgcatcattgatcactttatt
taataacccgggctaagaatcttca
gaattcaaatattctgactaatgttagattgaagagactagttcactggg
aaagaaggaagaacgatagaatgttagaaggatagaagccaagggtggtt
gtccatagaagaaatactgctgctctataccaccctatgctttattagga
gttatagactatcctgaaatacatatcagaaattgtctgaataagttcac
aagtaagtaaatgaacaagtaaataaacatgttatatttgtatggtgtta
gagtttcattgttaaatttgccttgatatggtaaaattctaccagagaaa
ttttggctcattggatttccatacataactacataacccatgaagtaaaa
tgtgggctattccaatatccacaacgtgactattcttcctataaatgcat
gaatatttgtatgtaaaaatctttcataaaattttattctgaaaataatg
actaattgagactgcttgtcctcctacagggtgtaacccccccaaccccc
agcctgtaacaggctgatccagaccttgaccttgctgccactaaggagat
tacctagggtggagccttcctgcctagatgactctattgttcagccactg
ctgctcttctccttcaagacactgctacctgctgagaggaccctgagcta
ttctagagacttcatcctatcctgcaggtcatcacctgcagctggttcca
ggctccaagaatggattaacgggaatgggccgcccttctcccccccaccc
cctttataagcacagttttctattaaacattcgagctttgatcaggaacc
tttgacttagtttccatttttctctcgaccgcctagttcccctctctttt
cagccccgggttgcctcccaggtgaaacccggtctatgtgagctgcagga
cagctttccaacagtcttttataaattgtcttatagaaattaacattctt
aatatatgatcatctatgatgtgggacattggatggagaggtacattagt
atcattagaaatcatagtgtgatagtgtttggaatgccaacttgccagaa
tatagtggcctggtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_35198361_35199427
seq2: B6Ng01-172O23.g_60_1126 (reverse)

seq1  AACAACAGGGCACTATATTCTTGCCAGGTTGGCA-TCCAAACAACCTATC  49
      |||| |||| |||||||||| || || ||||||| ||||||||  |||||
seq2  AACACCAGGCCACTATATTC-TGGCAAGTTGGCATTCCAAACA--CTATC  47

seq1  ACACTTATG-TTTCTAATGATAACTAATGTACCTCTCCATCCAATGTCCC  98
      |||| |||| ||||||||||| ||||||||||||||||||||||||||||
seq2  ACAC-TATGATTTCTAATGAT-ACTAATGTACCTCTCCATCCAATGTCCC  95

seq1  AACATCATAGATGATCATATATTAAGAATGTTAAATTCTATAAGACAATT  148
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  -ACATCATAGATGATCATATATTAAGAATGTTAATTTCTATAAGACAATT  144

seq1  TAT-AAAGACTGTTGG-AAGCTGTCCTGCAGCTCACATAGACCGGGTTTC  196
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATAAAAGACTGTTGGAAAGCTGTCCTGCAGCTCACATAGACCGGGTTTC  194

seq1  ACCTGGGAGGCAACCCGGGGCTGAAAAGAGAGGGGAACTAGGCGGTCGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGAGGCAACCCGGGGCTGAAAAGAGAGGGGAACTAGGCGGTCGAG  244

seq1  AGAAAAATGG-AACTAAGTC-AAGGTTCCTGATCAAAGCTCGAATGTTTA  294
      |||||||||| ||||||||| |||||||||||||||||||||||||||||
seq2  AGAAAAATGGAAACTAAGTCAAAGGTTCCTGATCAAAGCTCGAATGTTTA  294

seq1  ATAGAAAACTGTGCTTATAAAGGGGGTGGGGGGGAGAAGGGCGGCCCATT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAACTGTGCTTATAAAGGGGGTGGGGGGGAGAAGGGCGGCCCATT  344

seq1  CCCGTTAATCCATTCTTGGAGCCTGGAACCAGCTGCAGGTGATGACCTGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTAATCCATTCTTGGAGCCTGGAACCAGCTGCAGGTGATGACCTGC  394

seq1  AGGATAGGATGAAGTCTCTAGAATAGCTCAGGGTCCTCTCAGCAGGTAGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGGATGAAGTCTCTAGAATAGCTCAGGGTCCTCTCAGCAGGTAGC  444

seq1  AGTGTCTTGAAGGAGAAGAGCAGCAGTGGCTGAACAATAGAGTCATCTAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTGAAGGAGAAGAGCAGCAGTGGCTGAACAATAGAGTCATCTAG  494

seq1  GCAGGAAGGCTCCACCCTAGGTAATCTCCTTAGTGGCAGCAAGGTCAAGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGGCTCCACCCTAGGTAATCTCCTTAGTGGCAGCAAGGTCAAGG  544

seq1  TCTGGATCAGCCTGTTACAGGCTGGGGGTTGGGGGGGTTACACCCTGTAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATCAGCCTGTTACAGGCTGGGGGTTGGGGGGGTTACACCCTGTAG  594

seq1  GAGGACAAGCAGTCTCAATTAGTCATTATTTTCAGAATAAAATTTTATGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAAGCAGTCTCAATTAGTCATTATTTTCAGAATAAAATTTTATGA  644

seq1  AAGATTTTTACATACAAATATTCATGCATTTATAGGAAGAATAGTCACGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTTACATACAAATATTCATGCATTTATAGGAAGAATAGTCACGT  694

seq1  TGTGGATATTGGAATAGCCCACATTTTACTTCATGGGTTATGTAGTTATG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATATTGGAATAGCCCACATTTTACTTCATGGGTTATGTAGTTATG  744

seq1  TATGGAAATCCAATGAGCCAAAATTTCTCTGGTAGAATTTTACCATATCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAATCCAATGAGCCAAAATTTCTCTGGTAGAATTTTACCATATCA  794

seq1  AGGCAAATTTAACAATGAAACTCTAACACCATACAAATATAACATGTTTA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAATTTAACAATGAAACTCTAACACCATACAAATATAACATGTTTA  844

seq1  TTTACTTGTTCATTTACTTACTTGTGAACTTATTCAGACAATTTCTGATA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTGTTCATTTACTTACTTGTGAACTTATTCAGACAATTTCTGATA  894

seq1  TGTATTTCAGGATAGTCTATAACTCCTAATAAAGCATAGGGTGGTATAGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCAGGATAGTCTATAACTCCTAATAAAGCATAGGGTGGTATAGA  944

seq1  GCAGCAGTATTTCTTCTATGGACAACCACCCTTGGCTTCTATCCTTCTAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGTATTTCTTCTATGGACAACCACCCTTGGCTTCTATCCTTCTAA  994

seq1  CATTCTATCGTTCTTCCTTCTTTCCCAGTGAACTAGTCTCTTCAATCTAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATCGTTCTTCCTTCTTTCCCAGTGAACTAGTCTCTTCAATCTAA  1044

seq1  CATTAGTCAGAATATTTGAATTC  1067
      |||||||||||||||||||||||
seq2  CATTAGTCAGAATATTTGAATTC  1067