BAC Information

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BAC

Clone NameB6Ng01-173E11
Chromosome10 (Build37)
Map Location 56,199,323 - 56,200,462
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041927, D630037F22Rik, 1700060H10Rik, EG629732, Gja1
Downstream geneEG668347, LOC100042622, LOC668355, LOC100042628, EG629739, LOC629742, LOC668363
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173E11.bB6Ng01-173E11.g
ACCGA001669GA001670
length1,2461,154
definitionB6Ng01-173E11.b B6Ng01-173E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaacctacagcaaacca
atagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgtccactctcgccctacctattcaacattg
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaagcc
tgataaacaggttcaataaagtagctggatataaaattaactcacacaag
tcaatggcctttctgtacacaaaggataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaataccttggcg
tgactctaactaaggaagtgaaagatctgtatgataagaacttcaagtct
ctaaagaaagaaattaaagatctcagaagatggaaagatctcccatgctc
atggattggcaggatcaacattgtaaaaatggctatcttgccaaaagcaa
tctacagattcaatgcaatccccatcaaaattccaactcaattcttcaac
gaattagaaagggcaattggcagattcatctggaataacaaaaaaccgag
gatagcaaaaactcttctcaaggataaaagaacctctggtggaatcacca
tgccagacctaaaactgtactacagagcaattgtgatcaaaacttcatgg
tactggtatagtgacagacaagtagaccaatggaacagaattgaagaccc
agaaatgaacccacacacctatggtcacttgatctttgacaagggagcta
aaaccatccagtggaaaaaagacagcattttcaacaaatggtgctggcac
aactggtggttatcatgtagaagaatgtgaattgatccattttctatctc
cttgtactaggtcaaatctaagtggattaaggaactccacataaaacaga
agacactgaaacttatagaggagaaagtagggaaaagcctcgaagatatg
ggttcagggaaaaatcctgaatagaacagcaatgcccttgtgctgtaaga
atcaagaatcgataaatggacctctaattgcaagctcctggcaaagcaag
aaccgtccattaagaccaaaaggccacccacacaggaatgtgggga
gaattccctatttttaaccactgtgggaaaacagaaatgagcttatagga
tgcaccgcaaacctatttcccaagaaacaccctgaagtgaagtcacagaa
aagtccacttaaaatggcttatgagttcttttatatttaagtctttacag
atttctggggcttgctgagcaacaccaactctccaagcagatctggcttg
tgtaagataatggctggtattcataccacatcttccagggacagatagac
tttactcaatacctggtgttctcaaggaatgcctacataagggcactctg
acacctcaaagctcaagccagaaatctggaaaccatgctttttgcttgaa
atttgacttttaaaacaaacttgaaataaatgatatgggtcaaactaata
aacgttcatgaggactgagtctggttagggaaggtgcccctttgtagttc
agattgatgttcctttaaaaaagattagagcattcaaaatcttgcagcca
gacagctgtctacctacatgaccctgtagttttccctaaccctagtcttt
aaaagttttttttttcttttcttttctttcctttttcttttctttttttt
tctttcttttttttttttttaactttttcattgcacattgaactttgctg
gtgaagtaaagggagagaggtagggtgccagtactcatggggatgagatg
ttttcctcttcacaacttcagagcagaaatccttttgtgggcagtgagta
cctggggtctggactgcaggaagtaatagcttagaaaatggcccagctaa
agtcctgcctaagagtcagccaggaggtcagagcaaaatagccttcccgg
gtcttgatgacaggcgttaactgcactgttctgaacccaatttcttggtg
gtggtgtcccagtctttatgatgtgactgttaacctcctacctgtcatcc
agggctgctcttctgcttttaaaatagaaaggacgtctttttttctctgg
ttgacttgagaaaatgaatacaaaagaaaggtttcggcactctttcaatg
gacaatatcaccctcggagggctttttccataagatttaagaattcactg
gctgcatgaacttcggggatgatgccagacggcccaccgaaggtaaattc
atac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_56199323_56200462
seq2: B6Ng01-173E11.g_69_1222

seq1  GAATTCCCTATTTTTAACCACTGTGGGAAAACAGAAATGAGCTTATAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTATTTTTAACCACTGTGGGAAAACAGAAATGAGCTTATAGGA  50

seq1  TGCACCGCAAACCTATTTCCCAAGAAACACCCTGAAGTGAAGTCACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCGCAAACCTATTTCCCAAGAAACACCCTGAAGTGAAGTCACAGAA  100

seq1  AAGTCCACTTAAAATGGCTTATGAGTTCTTTTATATTTAAGTCTTTACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCACTTAAAATGGCTTATGAGTTCTTTTATATTTAAGTCTTTACAG  150

seq1  ATTTCTGGGGCTTGCTGAGCAACACCAACTCTCCAAGCAGATCTGGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGGGCTTGCTGAGCAACACCAACTCTCCAAGCAGATCTGGCTTG  200

seq1  TGTAAGATAATGGCTGGTATTCATACCACATCTTCCAGGGACAGATAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGATAATGGCTGGTATTCATACCACATCTTCCAGGGACAGATAGAC  250

seq1  TTTACTCAATACCTGGTGTTCTCAAGGAATGCCTACATAAGGGCACTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCAATACCTGGTGTTCTCAAGGAATGCCTACATAAGGGCACTCTG  300

seq1  ACACCTCAAAGCTCAAGCCAGAAATCTGGAAACCATGCTTTTTGCTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCAAAGCTCAAGCCAGAAATCTGGAAACCATGCTTTTTGCTTGAA  350

seq1  ATTTGACTTTTAAAACAAACTTGAAATAAATGATATGGGTCAAACTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACTTTTAAAACAAACTTGAAATAAATGATATGGGTCAAACTAATA  400

seq1  AACGTTCATGAGGACTGAGTCTGGTTAGGGAAGGTGCCCCTTTGTAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTCATGAGGACTGAGTCTGGTTAGGGAAGGTGCCCCTTTGTAGTTC  450

seq1  AGATTGATGTTCCTTTAAAAAAGATTAGAGCATTCAAAATCTTGCAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGATGTTCCTTTAAAAAAGATTAGAGCATTCAAAATCTTGCAGCCA  500

seq1  GACAGCTGTCTACCTACATGACCCTGTAGTTTTCCCTAACCCTAGTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGTCTACCTACATGACCCTGTAGTTTTCCCTAACCCTAGTCTTT  550

seq1  AAAAGTTTTTTTTTTCTTTTCTTTTCTTTCCTTTTTCTTTTCTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTTTTTTTTCTTTTCTTTTCTTTCCTTTTTCTTTTCTTTTTTTT  600

seq1  TCTTTCTTTTTTTTTTTTTTAACTTTTTCATTGCACATTGAACTTTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTTTTTTTTTTTAACTTTTTCATTGCACATTGAACTTTGCTG  650

seq1  GTGAAGTAAAGGGAGAGAGGT-TGGTGCCAGTACTCATGGGGATGAGATG  699
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  GTGAAGTAAAGGGAGAGAGGTAGGGTGCCAGTACTCATGGGGATGAGATG  700

seq1  TTTTCCTCTTCACAACTTCAGAGCAGAAATCC-TTTGTGGGCAGTGAGTA  748
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTCCTCTTCACAACTTCAGAGCAGAAATCCTTTTGTGGGCAGTGAGTA  750

seq1  CCTGGGGTCTGGACTGCAGGAAGTAATAGCTTAGAAAATGGCCCAGCTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGGTCTGGACTGCAGGAAGTAATAGCTTAGAAAATGGCCCAGCTAA  800

seq1  AGTCCTGCCT-AGAGTCAGGCCAGGAGGTCAGAGC-AAATAG-CTTCCCG  845
      |||||||||| ||||||| |||||||||||||||| |||||| |||||||
seq2  AGTCCTGCCTAAGAGTCA-GCCAGGAGGTCAGAGCAAAATAGCCTTCCCG  849

seq1  GGTC-TGATGACAGGCGTTAACTGCACTGTTCTGA--CCCATTTCTT-GT  891
      |||| ||||||||||||||||||||||||||||||  || ||||||| ||
seq2  GGTCTTGATGACAGGCGTTAACTGCACTGTTCTGAACCCAATTTCTTGGT  899

seq1  GGT-GTGTCCCAGTCTTTATGATGTGACTGTT-ACCTCCTACCTGTCAT-  938
      ||| |||||||||||||||||||||||||||| |||||||||||||||| 
seq2  GGTGGTGTCCCAGTCTTTATGATGTGACTGTTAACCTCCTACCTGTCATC  949

seq1  CAGGGCTGCTCTTCTGCTTTTAGAATAGAAA-GACGTTCTTTCTTCCTCT  987
      |||||||||||||||||||||| |||||||| |||| ||||| || ||||
seq2  CAGGGCTGCTCTTCTGCTTTTAAAATAGAAAGGACG-TCTTTTTTTCTCT  998

seq1  GGTTGACTTGAG-AAATGAATAC-AAAGAAAGGTTTCGGCCACTC-TTCA  1034
      |||||||||||| |||||||||| ||||||||||||||| ||||| ||||
seq2  GGTTGACTTGAGAAAATGAATACAAAAGAAAGGTTTCGG-CACTCTTTCA  1047

seq1  ATGGACAATA-CA-CCTC-GAGTGCTTTTTCTATAGATTTTTAGAA-TCA  1080
      |||||||||| || |||| ||| |||||||| |||   ||| |||| |||
seq2  ATGGACAATATCACCCTCGGAGGGCTTTTTCCATAAGATTTAAGAATTCA  1097

seq1  CTGGCTGCATAGACTTCGTGGAATGATGCAAGACGCCACCACGAAAGGTT  1130
      ||||||||||  |||||| || ||||||| ||||| | ||||  |||| |
seq2  CTGGCTGCATGAACTTCG-GGGATGATGCCAGACGGC-CCACCGAAGG-T  1144

seq1  TAATTCATAC  1140
       |||||||||
seq2  AAATTCATAC  1154