BAC Information

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BAC

Clone NameB6Ng01-173J17
Chromosome10 (Build37)
Map Location 64,761,664 - 64,762,438
singlet/doubletsinglet
Overlap genenone
Upstream geneCtnna3
Downstream geneLOC665206, LOC216036, 1700023F02Rik, 4930407I19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173J17.bB6Ng01-173J17.g
ACCGA001907GA001908
length1,097779
definitionB6Ng01-173J17.b B6Ng01-173J17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatcattatctttgtaaagtattatccttgcatgaagtaaatgg
ctctcttttcctttcaacaggacaaaatatatacacttgagttttagcag
actctacctgttagctcttccaaatctttgttctctgattatactctgaa
gacatatagattttatattcgttcttcctgacagagatggacatattaca
caggggcactgaagcatgtaatgtgaccgctcagctacctaaattaatta
ttaaagctacttttctctattcttgttagtaagaataatcctatgctttt
tcaagactttcacctatagccaaacatattcttatatatgcttttaacct
gttgggatgctgtgatgaaatggtccaaaccagtggttttcaacctgtgg
gtcatgacccctttggcaaacttctatctctaaaactatttacaataata
ttcataaatgaagtaccaatagaaaaatttatggttatggtcaccacaac
atgtattaaagggccattgtattaggaaggatgagaaccactaatgctga
attttatagattatagaagagagaaattcttttttttattagatattttc
ttcatctacatttcaaatgctatcccaaaagtcccctataccctccccct
accctgctcccctacccacccactcccacttcttggctctggtgattctt
tgtactggggcatataaagtttgcaagcccaaggggcctctcttcccaat
gatggccgactaggccatcttctgctacatatgcagctagagacatgagc
tctgggggtactggttagttcatattgttgtttccacctatagggttgca
gactcctttcagctccttgggtactttctctagttcctccattggggggc
cctgtgttccatccacttctgtaactgcccaggcactggcatagcctcac
ggctatatcaagggtcctttaaagcaaaatctttcttggcatatgcaata
gtgcctggcgtttggtggctgattatggggtggaacccaagggtggggca
agctctgggaatggtccatccttcaatctaactccaactttgaaatc

gaattctctggttcctaataaacaacaaaggttctttaaatttcaccttt
gaatacaacagtagtaaaaattgaatttctatatcatttaatcattatgt
gaggactttggaaaagctccatgtagaatggaaattctatatatgcactg
tatatacaaattttggtctcagtatatttgtttaagcattttaaactgca
ttgaggctgtgctattgatgcatgtcagagccctctgttaagctagcctt
tgcttgcctatccttgtttcttgaacctaggaacttcaggctaagacact
ttgttctttaaaagaatcttctctctctctgtctctctctctctctgtct
ctctctctctctttctctctctctcctctcctcatccctcactgtctctc
tctctctctctctctctctctctctctctctgtctctctctctgtctctc
tctctctctgtctgtctctctctcctccctccctttaaatctttaaatct
aggatacaaaggccacccttcctctcttctgttgatactggtgttctttt
ctctatagtttatcctgcccattccactcccaatctgaatttctagtcaa
aatataaaccttgtttcctccccttcctcttcttttttctttctattgcc
tccttttttcctctctactcttcagttcaacagattcatatggttgttag
agaaaatacagtatccaaaaaaaaatccaataatggctgctttttctgga
gaaatttttttttctaaaagaggagtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_64761664_64762438
seq2: B6Ng01-173J17.g_68_846

seq1  GAATTCTCTGGTTCCTAATAAACAACAAAGGTTCTTTAAATTTCACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGTTCCTAATAAACAACAAAGGTTCTTTAAATTTCACCTTT  50

seq1  GAATACAACAGTAGTAAAAATTGAATTTCTATATCATTTAATCATTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAACAGTAGTAAAAATTGAATTTCTATATCATTTAATCATTATGT  100

seq1  GAGGACTTTGGAAAAGCTCCATGTAGAATGGAAATTCTATATATGCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTTTGGAAAAGCTCCATGTAGAATGGAAATTCTATATATGCACTG  150

seq1  TATATACAAATTTTGGTCTCAGTATATTTGTTTAAGCATTTTAAACTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAAATTTTGGTCTCAGTATATTTGTTTAAGCATTTTAAACTGCA  200

seq1  TTGAGGCTGTGCTATTGATGCATGTCAGAGCCCTCTGTTAAGCTAGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCTGTGCTATTGATGCATGTCAGAGCCCTCTGTTAAGCTAGCCTT  250

seq1  TGCTTGCCTATCCTTGTTTCTTGAACCTAGGAACTTCAGGCTAAGACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCCTATCCTTGTTTCTTGAACCTAGGAACTTCAGGCTAAGACACT  300

seq1  TTGTTCTTTAAAAGAATCTTCTCTCTCTCTGTCTCTCTCTCTCTCTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTTTAAAAGAATCTTCTCTCTCTCTGTCTCTCTCTCTCTCTGTCT  350

seq1  CTCTCTCTCTCTTTCTCTCTCTCTCCTCTCCTCATCCCTCACTGTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTTTCTCTCTCTCTCCTCTCCTCATCCCTCACTGTCTCTC  400

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTGTCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTGTCTCTC  450

seq1  TCTCTCTCTGTCTGTCTCTCTCTCCTCCCTCCCTTTAAATCTTTAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGTCTGTCTCTCTCTCCTCCCTCCCTTTAAATCTTTAAATCT  500

seq1  AGGATACAAAGGCCACCCTTCCTCTCTTCTGTTGATACTGGTGTTCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACAAAGGCCACCCTTCCTCTCTTCTGTTGATACTGGTGTTCTTTT  550

seq1  CTCTATAGTTTATCCTGCCCATTCCACTCCCAATCTGAATTTCTAGTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAGTTTATCCTGCCCATTCCACTCCCAATCTGAATTTCTAGTCAA  600

seq1  AATATAAACCTTGTTTCCTCCCCTTCCTCTTCTTTTTTCTTTCTATTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAACCTTGTTTCCTCCCCTTCCTCTTCTTTTTTCTTTCTATTGCC  650

seq1  TCCTTTTTTCCTCTCTACTCTTCAGTTCAACAGA-TCATATGGTTGTTAG  699
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCCTTTTTTCCTCTCTACTCTTCAGTTCAACAGATTCATATGGTTGTTAG  700

seq1  AGAAAATACAGTAT-CAAAAAAAAATCCAATAATGGCTGCTTTTACTGGA  748
      |||||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  AGAAAATACAGTATCCAAAAAAAAATCCAATAATGGCTGCTTTTTCTGGA  750

seq1  GAA--TTTTTTTTCTAAAAGAGGAGTCTG  775
      |||  ||||||||||||||||||||||||
seq2  GAAATTTTTTTTTCTAAAAGAGGAGTCTG  779


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