BAC Information

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BAC

Clone NameB6Ng01-174C15
Chromosome10 (Build37)
Map Location 21,395,548 - 21,575,220
singlet/doubletdoublet
Overlap geneEG432436, LOC100039936, LOC628133
Upstream genePde7b, LOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik
Downstream geneSgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174C15.bB6Ng01-174C15.g
ACCGA002320GA002321
length9951,086
definitionB6Ng01-174C15.b B6Ng01-174C15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,574,235 - 21,575,220)(21,395,548 - 21,396,619)
sequence
gaattcatacaccaccaacaaaccacagaaggaaggggaacgttccaggc
agagggctaacatgagtaagagcccaaagtaagtggcttgtcgtaggggt
tcaacaccattgaagaacactgcggggtggagcgagccaggaagtgagag
cagaggatggaaggatgcaggctggcccgaggatgcctttggctgatagt
gaggcagctctgtagatggttataaccacaggaggttctaaaatccttct
tgtacttttgagaacagcccccagctgagaggtactatgagtttcttaga
aaattgcgttggctagggtcagcaagatgggtcagcgggtgaaaacatga
gctgctaagcctgaggatttgagtttgatcacatggtggaaggaaagagt
tgacacccacatgccgtcctctggcttccacagtcaccttggcatgtgct
catatgtgggatgtgcacacagatatgaacatgtgcactcacgcgtgcac
acatacacacacacacacacacatattttggctataaactgatgggcact
ttgtactttcttaggtatcaaaatcagaccaagtcacagggcataagtgt
ctgggaataagtccaggaaatatcagataggaagtgggaaaggaaggagg
gaaaagagacattagtaaaaggtgtgttaatgaggtgggtaaacaacggt
aaggggaaatgtctagcacagcggttctcaacctttcccaatgccatgac
cctttaattagtccctcatgttggggttacctcccaaccataaaattatt
tttgttgctccttcataactgtagttttgatacaaatatgaatcataatg
taaatacctgacacactgcaaagcaggtttgagaaccgctggtcttagcc
atgtctcatgattaccaacacacagggcctagaaactggagtctctaact
cctgtcagggtcgtggctgatggccacttgagatggatgttccaa
gaattcattacaaagactcttcagattctcctaagtgtccacatacacct
gccaagaactcaatgacactctacctctctcctccgacttgcagggtagc
gatggcgtcgtcttacgtcatcctgacgtcatcttacgtcgtcatgacac
catcttacgttttttgatcagagccgaagctctgccctgcttgtcttttc
tgtctctttgattcctcgccttacactgtcaagttcccctggtcttggta
tcagaaagtgatggagaccaatctggtcccttgcatctgtgttcccatgg
acgtttattatttcaggactgtcttcactgtggggccgtaggtacacgct
gtgtccctctgatcttcctcatcatcaacttcatggccagaggttgtctg
tcaccctcagctaagcatttgtgtttcaggcccattcacctctcctcgtg
ttcatttctctgcacagaatcatcttcggaaagcctttcctgttcgccca
taagtcaggggcccatgctgtaggcatagaaatcctactgaaagcctgcc
agtgtcttcaggccacactttcgtgttatccttgaggacgagggtgtaac
tgttcgctacaagtagttaacacagctgtcactcaacacatacctttttg
ggctgaattaaaataaaatgaattatgttctctaagagtataaacggtct
gccttccagacatttaggtggaacacacacacacacacacacacaggcac
agagggaaggaggaaggcagagagagggggagacagggagagagaaagga
gttacaatcaggaatgagaaattttagttcaaaggcaggtcatcaggaag
gactgctcttatctaaggttgggttattccttttcacagaagtatctttc
tacaaaagatcaacaaaattttcccagaaattcaagttgtctggttagta
actcagaagaaaattagcctattccataacacgctttgggtttcgtttct
ttaatttttacttagaaacttctgacttcttagtcttccttgatttcttc
tttgaaaaggtactacctttgggttgtagttctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21574235_21575220
seq2: B6Ng01-174C15.b_44_1037 (reverse)

seq1  TGGAACATCCATCTCATGTGGCCTTCAGCC-CGACCCTGACAGGAGTTGG  49
      |||||||||||||||| |||||| |||||| ||||||||||||||||| |
seq2  TGGAACATCCATCTCAAGTGGCCATCAGCCACGACCCTGACAGGAGTTAG  50

seq1  AGGCTCCAGTTTCTAGGCCCTGTGTG-TGGTAATCCTGAGACCT-GCT-A  96
      || ||||||||||||||||||||||| |||||||| |||||| | ||| |
seq2  AGACTCCAGTTTCTAGGCCCTGTGTGTTGGTAATCATGAGACATGGCTAA  100

seq1  GGCCAGCGGTTCTC-AACCTGC-TTGCAGTGTGTCAGGTATTTACATTAT  144
      | |||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  GACCAGCGGTTCTCAAACCTGCTTTGCAGTGTGTCAGGTATTTACATTAT  150

seq1  GATTCATATTTGTATCAAAACTACAGTTATGAAGGAGCAACAAAAATAAT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATATTTGTATCAAAACTACAGTTATGAAGGAGCAACAAAAATAAT  200

seq1  TTTATGGTTGGGAGGTAACCCCAACATGAGGGACTAATTAAAGGGTCATG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTTGGGAGGTAACCCCAACATGAGGGACTAATTAAAGGGTCATG  250

seq1  GCATTGGG-AAGGTTGAGAACCGCTGTGCTAGACATTTCCCCTTACCGTT  293
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGGAAAGGTTGAGAACCGCTGTGCTAGACATTTCCCCTTACCGTT  300

seq1  G-TTACCCACCTCATTAACACACCTTTTACTAATGTCTCTTTTCCCTCCT  342
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCCACCTCATTAACACACCTTTTACTAATGTCTCTTTTCCCTCCT  350

seq1  TCCTTTCCCACTTCCTATCTGATATTTCCTGGACTTATTCCCAGACACTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCCACTTCCTATCTGATATTTCCTGGACTTATTCCCAGACACTT  400

seq1  ATGCCCTGTGACTTGGTCTGATTTTGATACCTAAGAAAGTACAAAGTGCC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTGTGACTTGGTCTGATTTTGATACCTAAGAAAGTACAAAGTGCC  450

seq1  CATCAGTTTATAGCCAAAATATGTGTGTGTGTGTGTGTGTATGTGTGCAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTTTATAGCCAAAATATGTGTGTGTGTGTGTGTGTATGTGTGCAC  500

seq1  GCGTGAGTGCACATGTTCATATCTGTGTGCACATCCCACATATGAGCACA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGAGTGCACATGTTCATATCTGTGTGCACATCCCACATATGAGCACA  550

seq1  TGCCAAGGTGACTGTGGAAGCCAGAGGACGGCATGTGGGTGTCAACTCTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGTGACTGTGGAAGCCAGAGGACGGCATGTGGGTGTCAACTCTT  600

seq1  TCCTTCCACCATGTGATCAAACTCAAATCCTCAGGCTTAGCAGCTCATGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCACCATGTGATCAAACTCAAATCCTCAGGCTTAGCAGCTCATGT  650

seq1  TTTCACCCGCTGACCCATCTTGCTGACCCTAGCCAACGCAATTTTCTAAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCCGCTGACCCATCTTGCTGACCCTAGCCAACGCAATTTTCTAAG  700

seq1  AAACTCATAGTACCTCTCAGCTGGGGGCTGTTCTCAAAAGTACAAGAAGG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATAGTACCTCTCAGCTGGGGGCTGTTCTCAAAAGTACAAGAAGG  750

seq1  ATTTTAGAACCTCCTGTGGTTATAACCATCTACAGAGCTGCCTCACTATC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGAACCTCCTGTGGTTATAACCATCTACAGAGCTGCCTCACTATC  800

seq1  AGCCAAAGGCATCCTCGGGCCAGCCTGCATCCTTCCATCCTCTGCTCTCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAGGCATCCTCGGGCCAGCCTGCATCCTTCCATCCTCTGCTCTCA  850

seq1  CTTCCTGGCTCGCTCCACCCCGCAGTGTTCTTCAATGGTGTTGAACCCCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGCTCGCTCCACCCCGCAGTGTTCTTCAATGGTGTTGAACCCCT  900

seq1  ACGACAAGCCACTTACTTTGGGCTCTTACTCATGTTAGCCCTCTGCCTGG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACAAGCCACTTACTTTGGGCTCTTACTCATGTTAGCCCTCTGCCTGG  950

seq1  AACGTTCCCCTTCCTTCTGTGGTTTGTTGGTGGTGTATGAATTC  986
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTCCCCTTCCTTCTGTGGTTTGTTGGTGGTGTATGAATTC  994

seq1: chr10_21395548_21396619
seq2: B6Ng01-174C15.g_67_1152

seq1  GAATTCATTACAAAGACTCTTCAGATTCTCCTAAGTGTCCACATACACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACAAAGACTCTTCAGATTCTCCTAAGTGTCCACATACACCT  50

seq1  GCCAAGAACTCAATGACACTCTACCTCTCTCCTCCGACTTGCAGGGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAACTCAATGACACTCTACCTCTCTCCTCCGACTTGCAGGGTAGC  100

seq1  GATGGCGTCGTCTTACGTCATCCTGACGTCATCTTACGTCGTCATGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGTCGTCTTACGTCATCCTGACGTCATCTTACGTCGTCATGACAC  150

seq1  CATCTTACGTTTTTTGATCAGAGCCGAAGCTCTGCCCTGCTTGTCTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTACGTTTTTTGATCAGAGCCGAAGCTCTGCCCTGCTTGTCTTTTC  200

seq1  TGTCTCTTTGATTCCTCGCCTTACACTGTCAAGTTCCCCTGGTCTTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTGATTCCTCGCCTTACACTGTCAAGTTCCCCTGGTCTTGGTA  250

seq1  TCAGAAAGTGATGGAGACCAATCTGGTCCCTTGCATCTGTGTTCCCATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGTGATGGAGACCAATCTGGTCCCTTGCATCTGTGTTCCCATGG  300

seq1  ACGTTTATTATTTCAGGACTGTCTTCACTGTGGGGCCGTAGGTACACGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTATTATTTCAGGACTGTCTTCACTGTGGGGCCGTAGGTACACGCT  350

seq1  GTGTCCCTCTGATCTTCCTCATCATCAACTTCATGGCCAGAGGTTGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCTCTGATCTTCCTCATCATCAACTTCATGGCCAGAGGTTGTCTG  400

seq1  TCACCCTCAGCTAAGCATTTGTGTTTCAGGCCCATTCACCTCTCCTCGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTCAGCTAAGCATTTGTGTTTCAGGCCCATTCACCTCTCCTCGTG  450

seq1  TTCATTTCTCTGCACAGAATCATCTTCGGAAAGCCTTTCCTGTTCGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCTCTGCACAGAATCATCTTCGGAAAGCCTTTCCTGTTCGCCCA  500

seq1  TAAGTCAGGGGCCCATGCTGTAGGCATAGAAATCCTACTGAAAGCCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAGGGGCCCATGCTGTAGGCATAGAAATCCTACTGAAAGCCTGCC  550

seq1  AGTGTCTTCAGGCCACACTTTCGTGTTATCCTTGAGGACGAGGGTGTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTCAGGCCACACTTTCGTGTTATCCTTGAGGACGAGGGTGTAAC  600

seq1  TGTTCGCTACAAGTAGTTAACACAGCTGTCACTCAACACATACCTTTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCGCTACAAGTAGTTAACACAGCTGTCACTCAACACATACCTTTTTG  650

seq1  GGCTGAATTAAAATAAAATGAATTATGTTCTCTAAGAGTATAAACGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAATTAAAATAAAATGAATTATGTTCTCTAAGAGTATAAACGGTCT  700

seq1  GCCTTCCAGACATTTAGGTGGAACACACACACACACACACACACAGGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCAGACATTTAGGTGGAACACACACACACACACACACACAGGCAC  750

seq1  AGAGGGAAGGAGGAAGGCAGAGAGAGGGGGAGACAGGGAGAGAGAAAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAGGAGGAAGGCAGAGAGAGGGGGAGACAGGGAGAGAGAAAGGA  800

seq1  GTTACAATCAGGAATGAGAAATTTAAG-TCAAAGGCAGGTCACCAGGAAG  849
      |||||||||||||||||||||||| || |||||||||||||| |||||||
seq2  GTTACAATCAGGAATGAGAAATTTTAGTTCAAAGGCAGGTCATCAGGAAG  850

seq1  GACTGCTC-TATCTAGGTTTGGGTAAT--CCTTTCACAG-AGAATC-TTC  894
      |||||||| |||||| | |||||| ||  | |||||||| || ||| |||
seq2  GACTGCTCTTATCTAAGGTTGGGTTATTCCTTTTCACAGAAGTATCTTTC  900

seq1  TACAAAGATTCAACAAAATTTTCCCAG-AATTCAAGTGTTCT-GTTAGTA  942
      ||||||   |||||||||||||||||| |||||||||  ||| |||||||
seq2  TACAAAAGATCAACAAAATTTTCCCAGAAATTCAAGTTGTCTGGTTAGTA  950

seq1  ACTCAGAAGAAAATTAGCC-ATTTCAAGAGACGCTT--GGGTTCGTTTC-  988
      ||||||||||||||||||| ||| ||  | ||||||  || |||||||| 
seq2  ACTCAGAAGAAAATTAGCCTATTCCATAACACGCTTTGGGTTTCGTTTCT  1000

seq1  ATAAATTTTAGCTAGAA--CTCTGACTTCTTAGTACTTCTTTATTTCCTT  1036
       ||| |||||  |||||   |||||||||||||| |||| ||  || |||
seq2  TTAATTTTTACTTAGAAACTTCTGACTTCTTAGT-CTTCCTTGATTTCTT  1049

seq1  CTTGGAAAGTTAACTACC--TGGGTTGTAGTTTCTGTC  1072
      ||| ||||    ||||||  |||||||||| |||||||
seq2  CTTTGAAAAGGTACTACCTTTGGGTTGTAG-TTCTGTC  1086