BAC Information

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BAC

Clone NameB6Ng01-174F23
Chromosome10 (Build37)
Map Location 71,447,378 - 71,580,336
singlet/doubletdoublet
Overlap genenone
Upstream geneBicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1, Ipmk, LOC100039860, LOC216081, EG216082, LOC622812, EG327767, 1700049L16Rik
Downstream geneLOC100040505, Zwint, LOC432471
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174F23.bB6Ng01-174F23.g
ACCGA002470GA002471
length1,136827
definitionB6Ng01-174F23.b B6Ng01-174F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,579,229 - 71,580,336)(71,447,378 - 71,448,202)
sequence
gaattctggggtaagagttacatacatccaaatttaatttttgtttactt
ttacttaaactgagaattagtaactatctaattccttgattatatccttt
tgtaaaagcattcaacattcccgtatcccaaatatttgaaaatgtaattc
attacattaaatctatgagcccattattactgattgtcctttatagagga
caaactggatggattgcttcatgctatccataatacaatcaaacaattta
aaataagggtaactccataaaactcaaaaccttcttttgaatcaagcaga
aaaggctggcttcaacatttctctatagcggatgactttgaatcaatgac
attactccctgtttgcccgtgaagctggagcatcagctccattcaccaga
cctccctcttctttacagggtgccccgggatctcggggttgctaatgtag
gttaattggatcctcaggtacacatgcccattttttcactcagctcatcc
tgcatttgcgattttctccaactcatatacatataccctagacccgtctt
tgccctgcttccttctatatcccaaaaagagtatcattcctcacatctaa
tggttttaagattatctaaacacagacttttaattatcaaccccatgtat
tccctcctctccttccagtcccaccctcacaacatcccttcccccaaaac
tctctccccttctcctcagagagaaggagagaccccacccgcaatggcta
ccatcccaccctggcacatcaagtcacagcaagactaaatgcatcctctc
ccactgagtccaaacaaggcagtccagttaagagaaagggatccaaaggc
aagcaacagagccagagaatacacccactccaattgtcatggaacccaca
ggaagaccaagctgcacatctgctacaaatatgtaagtggtctaaggtcc
agactctgcatgttctttgggtcggtggctcagtctctgtgagcctccaa
tgggcccaagttagttgacactgttggtcttcttgtgttgttcctttgac
acttgtcttgctccccccaatcccttccccataagtctcacaaaaacacc
ccttgattttgaaaggatttggtttcttgcatctct
gaattcatttgacctttttttttttttttttttaaatgattctttttttt
ttttttttttttttttttttttaaaatttatttattatttaagtaagtcc
cctgtagctgtcttccgaccctccagaaaagggagtcagatctcgttacg
gatggttgggagccaccatgtggttgctgggatttgaactccggaccttc
ggaaaagcagtcgggtgctcttacctgctgagccatctcaccagccccat
ttgaccttttattttttaaaatgttgcctttctgattcaatctctcatga
atttcagttctatttagattttctaattattttaacagttcatttatttt
aaatttcttgaaatcaaatacttactgcccagttgttcatcatattcttc
cccaatcctaattactataaaatacatattaatagtctactttttatttc
cagttttattagctctctttttctgttctgtctaaccacaggatggactt
tttctagtcacctggggaccagatattcagtaatgtgtgtccacattctg
cctcaacactgggatgtgtgaatgctgcttgggcagactaaatgggagtc
gctaggctatattccatcatcatcatcattggggtataggggtaataaaa
cacagcctaagatgggggggcccagcctgtgtgaaaaaagacagaggctg
gggatgaagctaaagttccctaacttccaggacacccagctactgctggt
aagtgtgacgagtctgggacagtgggcacccacaggccagtgatgagcca
agggcagtggggggaagggggaaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_71579229_71580336
seq2: B6Ng01-174F23.b_53_1174 (reverse)

seq1  AGAGATGC-AGAAACCAAAACCTT--CAAATCA--GGGTGTTTTGTGGAA  45
      |||||||| |||||||||| ||||   ||||||  ||||||||| ||  |
seq2  AGAGATGCAAGAAACCAAATCCTTTCAAAATCAAGGGGTGTTTT-TGTGA  49

seq1  GAC-TATGGGGAA-GGATT-GGGGGAGC-AGAC-AGTGTCAA--GGACAC  88
      ||| ||||||||| ||||| |||||||| |||| ||||||||  | ||| 
seq2  GACTTATGGGGAAGGGATTGGGGGGAGCAAGACAAGTGTCAAAGGAACAA  99

seq1  CACAAGAAGACCAACAGTGTCAACTAACTTGGGCCCA-TGGAGGCTCACA  137
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACAAGAAGACCAACAGTGTCAACTAACTTGGGCCCATTGGAGGCTCACA  149

seq1  GAGACTGAGCCACCGA-CCAAAGAACATGCAGAGTCTGGACC-TAGACCA  185
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  GAGACTGAGCCACCGACCCAAAGAACATGCAGAGTCTGGACCTTAGACCA  199

seq1  CTTACATATTTGTAGCAGATGTGCAGCTTGGTCTTCCTGTGGGTTCCATG  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATATTTGTAGCAGATGTGCAGCTTGGTCTTCCTGTGGGTTCCATG  249

seq1  ACAATTGGAGTGGGTGTATTCTCTGGCTCTGTTGCTTGCCTTTGGATCCC  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGGAGTGGGTGTATTCTCTGGCTCTGTTGCTTGCCTTTGGATCCC  299

seq1  TTTCTCTTAACTGGACTGCCTTGTTTGGACTCAGTGGGAGAGGATGCATT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTAACTGGACTGCCTTGTTTGGACTCAGTGGGAGAGGATGCATT  349

seq1  TAGTCTTGCTGTGACTTGATGTGCCAGGGTGGGATGGTAGCCATTGCGGG  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTGCTGTGACTTGATGTGCCAGGGTGGGATGGTAGCCATTGCGGG  399

seq1  TGGGGTCTCTCCTTCTCTCTGAGGAGAAGGGGAGAGAGTTTTGGGGGAAG  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCTCTCCTTCTCTCTGAGGAGAAGGGGAGAGAGTTTTGGGGGAAG  449

seq1  GGATGTTGTGAGGGTGGGACTGGAAGGAGAGGAGGGAATACATGGGGTTG  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTGTGAGGGTGGGACTGGAAGGAGAGGAGGGAATACATGGGGTTG  499

seq1  ATAATTAAAAGTCTGTGTTTAGATAATCTTAAAACCATTAGATGTGAGGA  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAAAGTCTGTGTTTAGATAATCTTAAAACCATTAGATGTGAGGA  549

seq1  ATGATACTCTTTTTGGGATATAGAAGGAAGCAGGGCAAAGACGGGTCTAG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACTCTTTTTGGGATATAGAAGGAAGCAGGGCAAAGACGGGTCTAG  599

seq1  GGTATATGTATATGAGTTGGAGAAAATCGCAAATGCAGGATGAGCTGAGT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATGTATATGAGTTGGAGAAAATCGCAAATGCAGGATGAGCTGAGT  649

seq1  GAAAAAATGGGCATGTGTACCTGAGGATCCAATTAACCTACATTAGCAAC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATGGGCATGTGTACCTGAGGATCCAATTAACCTACATTAGCAAC  699

seq1  CCCGAGATCCCGGGGCACCCTGTAAAGAAGAGGGAGGTCTGGTGAATGGA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGATCCCGGGGCACCCTGTAAAGAAGAGGGAGGTCTGGTGAATGGA  749

seq1  GCTGATGCTCCAGCTTCACGGGCAAACAGGGAGTAATGTCATTGATTCAA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGCTCCAGCTTCACGGGCAAACAGGGAGTAATGTCATTGATTCAA  799

seq1  AGTCATCCGCTATAGAGAAATGTTGAAGCCAGCCTTTTCTGCTTGATTCA  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCCGCTATAGAGAAATGTTGAAGCCAGCCTTTTCTGCTTGATTCA  849

seq1  AAAGAAGGTTTTGAGTTTTATGGAGTTACCCTTATTTTAAATTGTTTGAT  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGGTTTTGAGTTTTATGGAGTTACCCTTATTTTAAATTGTTTGAT  899

seq1  TGTATTATGGATAGCATGAAGCAATCCATCCAGTTTGTCCTCTATAAAGG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATGGATAGCATGAAGCAATCCATCCAGTTTGTCCTCTATAAAGG  949

seq1  ACAATCAGTAATAATGGGCTCATAGATTTAATGTAATGAATTACATTTTC  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAGTAATAATGGGCTCATAGATTTAATGTAATGAATTACATTTTC  999

seq1  AAATATTTGGGATACGGGAATGTTGAATGCTTTTACAAAAGGATATAATC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTGGGATACGGGAATGTTGAATGCTTTTACAAAAGGATATAATC  1049

seq1  AAGGAATTAGATAGTTACTAATTCTCAGTTTAAGTAAAAGTAAACAAAAA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATTAGATAGTTACTAATTCTCAGTTTAAGTAAAAGTAAACAAAAA  1099

seq1  TTAAATTTGGATGTATGTAACTC  1108
      |||||||||||||||||||||||
seq2  TTAAATTTGGATGTATGTAACTC  1122

seq1: chr10_71447378_71448202
seq2: B6Ng01-174F23.g_66_892

seq1  GAATTCATTTGACCTTTTTTTTTTTTTTTTTTTAAATGATTCTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGACCTTTTTTTTTTTTTTTTTTTAAATGATTCTTTTTTTT  50

seq1  TTTTTTTTTTTTTTTTTTTTTTAAGATTTATTTATTATTTAAGTAAGTCC  100
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTAAAATTTATTTATTATTTAAGTAAGTCC  100

seq1  ACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTCGTTACG  150
       |||||||||||||| ||| |||||||| |||||||||||||||||||||
seq2  CCTGTAGCTGTCTTCCGACCCTCCAGAAAAGGGAGTCAGATCTCGTTACG  150

seq1  GATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTC  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGGGAGCCACCATGTGGTTGCTGGGATTTGAACTCCGGACCTTC  200

seq1  GGAAGAGCAGTCGGGTGCTCTTACCTGCTGAGCCATCTCACCAGCCCCAT  250
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGCAGTCGGGTGCTCTTACCTGCTGAGCCATCTCACCAGCCCCAT  250

seq1  TTGACCTTTTATTTTTTAAAATGTTGCCTTTCTGATTCAATCTCTCATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTTTTATTTTTTAAAATGTTGCCTTTCTGATTCAATCTCTCATGA  300

seq1  ATTTCAGTTCTATTTAGATTTTCTAATTATTTTAACAGTTCATTTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTTCTATTTAGATTTTCTAATTATTTTAACAGTTCATTTATTTT  350

seq1  AAATTTCTTGAAATCAAATACTTACTGCCCAGTTGTTCATCATATTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTGAAATCAAATACTTACTGCCCAGTTGTTCATCATATTCTTC  400

seq1  CCCAATCCTAATTACTATAAAATACATATTAATAGTCTACTTTTTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATCCTAATTACTATAAAATACATATTAATAGTCTACTTTTTATTTC  450

seq1  CAGTTTTATTAGCTCTCTTTTTCTGTTCTGTCTAACCACAGGATGGACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTATTAGCTCTCTTTTTCTGTTCTGTCTAACCACAGGATGGACTT  500

seq1  TTTCTAGTCACCTGGGGACCAGATATTCAGTAATGTGTGTCCACATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTCACCTGGGGACCAGATATTCAGTAATGTGTGTCCACATTCTG  550

seq1  CCTCAACACTGGGATGTGTGAATGCTGCTTGGGCAGACTAAATGGGAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACACTGGGATGTGTGAATGCTGCTTGGGCAGACTAAATGGGAGTC  600

seq1  GCTAGGCTATATTCCATCATCATCATCATTGGGGTATAGGGGTAATAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCTATATTCCATCATCATCATCATTGGGGTATAGGGGTAATAAAA  650

seq1  CACAGCCTAAGATGGGGGGGCCCAGCCTGTGTGAAAAAAGACAGAGGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTAAGATGGGGGGGCCCAGCCTGTGTGAAAAAAGACAGAGGCTG  700

seq1  GGGATGAAGCTAAGGTTCCCTAAC-TCCAGGACACCCAGCTACTGCTGGT  749
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  GGGATGAAGCTAAAGTTCCCTAACTTCCAGGACACCCAGCTACTGCTGGT  750

seq1  AAGTGTGACGAGTCTGGGACAGTGGGCACCCACAGGCCAGTGATGAGCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGACGAGTCTGGGACAGTGGGCACCCACAGGCCAGTGATGAGCCA  800

seq1  AGGGCAG-GTGGGGGAGGGGGAAATCC  825
      ||||||| | |||| |||||||||| |
seq2  AGGGCAGTGGGGGGAAGGGGGAAATTC  827