BAC Information

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BAC

Clone NameB6Ng01-174I16
Chromosome10 (Build37)
Map Location 56,494,572 - 56,628,493
singlet/doubletdoublet
Overlap genenone
Upstream geneD630037F22Rik, 1700060H10Rik, EG629732, Gja1, EG668347, LOC100042622, LOC668355
Downstream geneLOC100042628, EG629739, LOC629742, LOC668363, Hsf2, Serinc1, LOC211619, LOC668374, Pkib, Ppia-ps10_506.1, Fabp7, Smpdl3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174I16.bB6Ng01-174I16.g
ACCGA002595GA002596
length1,1571,009
definitionB6Ng01-174I16.b B6Ng01-174I16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,494,572 - 56,495,706)(56,627,509 - 56,628,493)
sequence
gaattcactattttgtttgtttttgaggaaggcattgggaaagcactgta
tcaaaacacaaagatatcatcaaacaacaattagttttaggtattttcag
tctgaccacaaataaaaaagtaatcctcctggcaaaactatactcacttc
cacaggaataactccatgcctggggacacgactcttgtgacagaaactta
ggcatttaatctctgtatgaagacattggccatctgaatacaccacaaga
tagaaggcggagtagatggcagtgaaaaggaggagagatcttctttatgc
tttaccataaaatagtctctcttgtctttaccaactctcccaaatacttg
tagatagccgttgggatgctcatgaccaatcaattaaaaacaatgaatcc
agtttactcttactttgttattggcatagctattccatgaggcacctatc
taaacaactttgggtagaataatatgtagggggagtttccctgattcctt
tcctaattatttccctaattgttgattggctaataaagatggcagaagcc
aataactggcagagctggccacagggtggttggctggagacagagcgatc
tcggagctcgaagaaacaaagcaggcatttgtggttaggaggaacaggca
ggcagcttctggtcccagagtctagctggaccaagcatgccttttaaagt
tatatgctacaataatatatcttgatatctgaatttgggccattattaaa
gagcaatgtgagatactttggggtattaattaaaatgctttcctaattta
catacattatacacattataagtgtgtgtgtttgtgtatccacttttcca
tagacacaaccatcactttgtgttaacacaatctagtaattaaataatag
ttattgacctttactgtcagaggccttttttgtttttctaaagatattta
tgcattattgttagttgaacgtatatctcatgtgtacaggtgcccacaga
caccataaggagaagcattggattccctgggagctggaaggtaaaggaag
ttgtgagaagctgaagacccaatttagggtgaattctcaggaagccacta
agtatttcttccatgactgaactcattcttcccaggcctttgtgagtcta
ccaatgg
gaattcctcatttgcccttcggctcatctaataatcagtaatcaagcttt
aagaaaatgggatgttaattttcctctacaagtttaaagataaaataagc
attttaatgttttctgtgagcaagaatgtggaattcagagcttttcctgt
tggtggaatgataaattagctcaaggactttggggaatattttgtcaaaa
tcaatctaaagttggaaagtgcagtcttagaactacaagaacacctcaag
caagctatggtatttgcattcaaacttgtgtttataaaaacaatcaaatt
agcattgcttgagcagtggatagctggtaaagacataaagcaaccaaaag
gaagagcgctagtgtgtgtcatattcaaaattctgtaaggtgggataggt
cacattgaaagaacaattacaaaatatctatatttatgtgaaaaaaaagt
tataaagtggtatgtattaagtagcttcatatttatatagatgcctggcc
taagactccttttctctctggctccctccctctctttccatcacatctct
cacaaccacaccaaagatataaatggattaaatgatatacaatatataaa
ttttagactaaaatccagaaaattccttaacaggaattaaaatttttcca
ttttaaaagtttatatatttgtatggtgatttaatatctaataccagcaa
aataaactataaaataatttaaaccaaccctagctcatgtttttcaaaac
aaattctaaatttagcacatttttcttttaaaatgaaaaatgtatcatat
gtctgaaatattttatactttgagggtcaaacaatattcataatatctaa
ctcgtcctcaaatttctaaacaaatgttattttccttcagtataggggta
tcaattcatgattaaataacatccttatattttaaagaaaacataaatgg
attacttaaattggatatgatgaatcaatcttgggtttctcctggtggtg
ggggacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_56494572_56495706
seq2: B6Ng01-174I16.b_45_1201

seq1  GAATTCACTATTTTGTTTGTTTTTGAGGAAGGCATTGGGAAAGCACTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATTTTGTTTGTTTTTGAGGAAGGCATTGGGAAAGCACTGTA  50

seq1  TCAAAACACAAAGATATCATCAAACAACAATTAGTTTTAGGTATTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACACAAAGATATCATCAAACAACAATTAGTTTTAGGTATTTTCAG  100

seq1  TCTGACCACAAATAAAAAAGTAATCCTCCTGGCAAAACTATACTCACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCACAAATAAAAAAGTAATCCTCCTGGCAAAACTATACTCACTTC  150

seq1  CACAGGAATAACTCCATGCCTGGGGACACGACTCTTGTGACAGAAACTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAATAACTCCATGCCTGGGGACACGACTCTTGTGACAGAAACTTA  200

seq1  GGCATTTAATCTCTGTATGAAGACATTGGCCATCTGAATACACCACAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTAATCTCTGTATGAAGACATTGGCCATCTGAATACACCACAAGA  250

seq1  TAGAAGGCGGAGTAGATGGCAGTGAAAAGGAGGAGAGATCTTCTTTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGCGGAGTAGATGGCAGTGAAAAGGAGGAGAGATCTTCTTTATGC  300

seq1  TTTACCATAAAATAGTCTCTCTTGTCTTTACCAACTCTCCCAAATACTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCATAAAATAGTCTCTCTTGTCTTTACCAACTCTCCCAAATACTTG  350

seq1  TAGATAGCCGTTGGGATGCTCATGACCAATCAATTAAAAACAATGAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGCCGTTGGGATGCTCATGACCAATCAATTAAAAACAATGAATCC  400

seq1  AGTTTACTCTTACTTTGTTATTGGCATAGCTATTCCATGAGGCACCTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTACTCTTACTTTGTTATTGGCATAGCTATTCCATGAGGCACCTATC  450

seq1  TAAACAACTTTGGGTAGAATAATATGTAGGGGGAGTTTCCCTGATTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAACTTTGGGTAGAATAATATGTAGGGGGAGTTTCCCTGATTCCTT  500

seq1  TCCTAATTATTTCCCTAATTGTTGATTGGCTAATAAAGATGGCAGAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATTATTTCCCTAATTGTTGATTGGCTAATAAAGATGGCAGAAGCC  550

seq1  AATAACTGGCAGAGCTGGCCACAGGGTGGTTGGCTGGAGACAGAGCGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTGGCAGAGCTGGCCACAGGGTGGTTGGCTGGAGACAGAGCGATC  600

seq1  TCGGAGCTCGAAGAAACAAAGCAGGCATTTGTGGTTAGGAGGAACAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGCTCGAAGAAACAAAGCAGGCATTTGTGGTTAGGAGGAACAGGCA  650

seq1  GGCAGCTTCTGGTCCCAGAGTCTAGCTGGACCAAGCATGCCTTTTAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTTCTGGTCCCAGAGTCTAGCTGGACCAAGCATGCCTTTTAAAGT  700

seq1  TATATGCTACAATAATATATCTTGATATCTGAATTTGGGCCATTATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCTACAATAATATATCTTGATATCTGAATTTGGGCCATTATTAAA  750

seq1  GAGCAATGTGAGATACTTTGGGGTATTAATTAAAATGCTTTCCTAATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGTGAGATACTTTGGGGTATTAATTAAAATGCTTTCCTAATTTA  800

seq1  CATACATTATACACATTATAAGTGTGTGTGTTTGTGTATCCAC-TTTCCA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATACATTATACACATTATAAGTGTGTGTGTTTGTGTATCCACTTTTCCA  850

seq1  TAGACACAACCATCAC-TTGTGTTAACACAATCTAGTAATTAAATAATAG  898
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAGACACAACCATCACTTTGTGTTAACACAATCTAGTAATTAAATAATAG  900

seq1  TTA-TGACC-TTACTGTCAGAGGCCTTTTTTG-TTTTCTAAAGATATTTA  945
      ||| ||||| |||||||||||||||||||||| |||||||||||||||||
seq2  TTATTGACCTTTACTGTCAGAGGCCTTTTTTGTTTTTCTAAAGATATTTA  950

seq1  TGCA-TAT--GTAG-TGAACGTATATCTCATGTGTACA-GTGCCCACAGA  990
      |||| |||   ||| ||||||||||||||||||||||| |||||||||||
seq2  TGCATTATTGTTAGTTGAACGTATATCTCATGTGTACAGGTGCCCACAGA  1000

seq1  CACCAT-AGGAG-AGCATTGGATTCCCT-GGAGCTGG-AGGTAAAGGAAG  1036
      |||||| ||||| ||||||||||||||| |||||||| ||||||||||||
seq2  CACCATAAGGAGAAGCATTGGATTCCCTGGGAGCTGGAAGGTAAAGGAAG  1050

seq1  TTGTGAG-AGCTAGAGACCAAATTTA-GGTGGATTCTCAAGGAAAGCACT  1084
      ||||||| ||||  ||||| |||||| |||| |||||| |||||  ||||
seq2  TTGTGAGAAGCTGAAGACCCAATTTAGGGTGAATTCTC-AGGAAGCCACT  1099

seq1  AAGTATT--CTCCATGACTGAGC-CA-TCTTCCCA-GCCTTTGT-AGTC-  1127
      |||||||   ||||||||||| | || |||||||| |||||||| |||| 
seq2  AAGTATTTCTTCCATGACTGAACTCATTCTTCCCAGGCCTTTGTGAGTCT  1149

seq1  ACCAATGG  1135
      ||||||||
seq2  ACCAATGG  1157

seq1: chr10_56627509_56628493
seq2: B6Ng01-174I16.g_67_1057 (reverse)

seq1  GAGAAA-CCAAGA-TGATTCATCATATC--ATTTAAGT-ATCCATTTATG  45
      |||||| |||||| ||||||||||||||  |||||||| |||||||||||
seq2  GAGAAACCCAAGATTGATTCATCATATCCAATTTAAGTAATCCATTTATG  50

seq1  TTTTCTTTAAAATATAA-GATGTTATTTAATCATGAATTGATA-CCCTAT  93
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  TTTTCTTTAAAATATAAGGATGTTATTTAATCATGAATTGATACCCCTAT  100

seq1  ACTGAAGGAAAATAACATTTGTTTTAGAAATTTGAGGACGAGTTAGATAT  143
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTGAAGGAAAATAACATTTG-TTTAGAAATTTGAGGACGAGTTAGATAT  149

seq1  TATGAATATTGTTTGACCCTCAAAGTATAAAATATTTCAGACATATGATA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATATTGTTTGACCCTCAAAGTATAAAATATTTCAGACATATGATA  199

seq1  CATTTTTCATTTTAAAAGAAAAATGTGCTAAATTTAGAATTTGTTTTGAA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCATTTTAAAAGAAAAATGTGCTAAATTTAGAATTTGTTTTGAA  249

seq1  AAACATGAGCTAGGGTTGGTTTAAATTATTTTATAGTTTATTTTGCTGGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAGCTAGGGTTGGTTTAAATTATTTTATAGTTTATTTTGCTGGT  299

seq1  ATTAGATATTAAATCACCATACAAATATATAAACTTTTAAAATGGAAAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATATTAAATCACCATACAAATATATAAACTTTTAAAATGGAAAAA  349

seq1  TTTTAATTCCTGTTAAGGAATTTTCTGGATTTTAGTCTAAAATTTATATA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTCCTGTTAAGGAATTTTCTGGATTTTAGTCTAAAATTTATATA  399

seq1  TTGTATATCATTTAATCCATTTATATCTTTGGTGTGGTTGTGAGAGATGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATCATTTAATCCATTTATATCTTTGGTGTGGTTGTGAGAGATGT  449

seq1  GATGGAAAGAGAGGGAGGGAGCCAGAGAGAAAAGGAGTCTTAGGCCAGGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAAGAGAGGGAGGGAGCCAGAGAGAAAAGGAGTCTTAGGCCAGGC  499

seq1  ATCTATATAAATATGAAGCTACTTAATACATACCACTTTATAACTTTTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATAAATATGAAGCTACTTAATACATACCACTTTATAACTTTTTT  549

seq1  TTCACATAAATATAGATATTTTGTAATTGTTCTTTCAATGTGACCTATCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATAAATATAGATATTTTGTAATTGTTCTTTCAATGTGACCTATCC  599

seq1  CACCTTACAGAATTTTGAATATGACACACACTAGCGCTCTTCCTTTTGGT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTACAGAATTTTGAATATGACACACACTAGCGCTCTTCCTTTTGGT  649

seq1  TGCTTTATGTCTTTACCAGCTATCCACTGCTCAAGCAATGCTAATTTGAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATGTCTTTACCAGCTATCCACTGCTCAAGCAATGCTAATTTGAT  699

seq1  TGTTTTTATAAACACAAGTTTGAATGCAAATACCATAGCTTGCTTGAGGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTATAAACACAAGTTTGAATGCAAATACCATAGCTTGCTTGAGGT  749

seq1  GTTCTTGTAGTTCTAAGACTGCACTTTCCAACTTTAGATTGATTTTGACA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTAGTTCTAAGACTGCACTTTCCAACTTTAGATTGATTTTGACA  799

seq1  AAATATTCCCCAAAGTCCTTGAGCTAATTTATCATTCCACCAACAGGAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCCCCAAAGTCCTTGAGCTAATTTATCATTCCACCAACAGGAAA  849

seq1  AGCTCTGAATTCCACATTCTTGCTCACAGAAAACATTAAAATGCTTATTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGAATTCCACATTCTTGCTCACAGAAAACATTAAAATGCTTATTT  899

seq1  TATCTTTAAACTTGTAGAGGAAAATTAACATCCCATTTTCTTAAAGCTTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTAAACTTGTAGAGGAAAATTAACATCCCATTTTCTTAAAGCTTG  949

seq1  ATTACTGATTATTAGATGAGCCGAAGGGCAAATGAGGAATTC  985
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGATTATTAGATGAGCCGAAGGGCAAATGAGGAATTC  991