BAC Information

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BAC

Clone NameB6Ng01-174K03
Chromosome10 (Build37)
Map Location 69,662,919 - 69,801,718
singlet/doubletdoublet
Overlap gene2310015B20Rik, Slc16a9, LOC632955
Upstream geneA930033H14Rik, Rhobtb1, LOC100040182, Cdc2a, LOC100039696, EG382371, Ank3, LOC100039734, 5730416O20Rik, Ccdc6
Downstream gene1200015N20Rik, LOC665398, Phyhipl, EG665429, Bicc1, LOC622551, C730027H18Rik, Tfam, Ube2d1, LOC665472, Zcd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174K03.bB6Ng01-174K03.g
ACCGA002664GA002665
length967991
definitionB6Ng01-174K03.b B6Ng01-174K03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,662,919 - 69,663,886)(69,800,737 - 69,801,718)
sequence
gaattcagttcccagcaaccacatggtggcttacaaccatctgtaatggg
aatccaatgccctcttctagtgtgtctgaagacagctctagtgtactcat
ataaatgaaaataaataaatctttaaaaaaaaaaacaagaaaaacagttg
ctgagtgtaattcaagtactcggtttctttaaaaaaaaagatgttcttga
taaagcagcaagaatattgattcatagaggcagaagaattgtgagctaag
gttggcatggcaaccgtaagtacacttgtctgtacaaagaaaataatttt
cattttgggatgtgcacaggggtatacatatgtaatcccagaccttggaa
aactgaggcaggaggatggaaagtttgaggtcagccaaggctgcatagta
agactccatcccataaaaggaaaaaagcagaaaagaagacagcatgctat
ttattcgttgtgtcacctgtgggatgccttaagattaacttgccaagtcc
ccactatacagatgagatggctgtcgttcaggtttagcaactgactgacc
agaacacttcatctctgaagtccctgtttccctcagccatagaagattct
ctccccctccccatgggcacagacatcataatgggcacccagattgagcc
aaacaagacagaagggagcagggacagccttccattggacttcttccctt
aattcctctactatgtccccgacatcccaaagacgatcctatctctataa
aatgtatatataggatcaggttggttaaggacaggaagttggtttcctgg
taaatattattgtgaaaggcattcatttacatattttgctaatcatcttc
ctgcaggaggcctgtctcttcctcaaacagaggcttctgcgcagctcatg
agagttcagctaagatgacaacaaactaagcctccaggtctgacaccgct
gttggggggaggggggg
gaattcagagaaaacaccatctatctttttgcatctgagggtcacttacc
aaaatgcataaagaaagactttaaatcaagcagcccagagattcctggcc
gagaaattgctttggccaaaccttgaattctttgatcacttttcaaaaac
tttcccctatatttggatgctggtaaatttgatggaatcagtatgtactt
actaggcaggctgtgctctggcttcatttttctcttgttctgggtgggaa
aaaaaagctcttaaatccagaaagaagttgtgggaagctatactacagta
agtgaataggttggtgtttttttgttttactatcatcattattattatta
gtttttgttttttgaaaggttctacattttattattggacaaaccacatc
ccccctttagacatgagcaagtctccaggttaaaaatgttgaactccgtc
tggtaggattgatggatgaccatgattcagtataaactctcagtcttgcc
attgtgtgaatccttacagacccagctttgttctcctccagtgtcttctc
ttagatctgtacctgattttgttaccggttttcatctgaatccattgagg
gataggacaatttcacttttgtttcttggccagaaactgcttgattttga
aagccttgtgagaagacatggctagaagctgaatcaggcatagagcactc
gatggtggaagaaaggagaagaaaaagtccaggacagaagagcaggatta
gaggacacacttaggctggagacatggctcagcggttaagagcactggtc
ctgagttcaaatcccagcaatcacatgggatctgatgcgttcttctggtg
tggtctgaaagacagtcacagtgtagtcatatacaataaaatgaataaaa
attaatccttttaaaataagaagagaagacgatgccactttggtttggtt
ttttgtttttgtttttttctttttttgccgggggattgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_69662919_69663886
seq2: B6Ng01-174K03.b_46_1012

seq1  GAATTCAGTTCCCAGCAACCACATGGTGGCTTACAACCATCTGTAATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCCAGCAACCACATGGTGGCTTACAACCATCTGTAATGGG  50

seq1  AATCCAATGCCCTCTTCTAGTGTGTCTGAAGACAGCTCTAGTGTACTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAATGCCCTCTTCTAGTGTGTCTGAAGACAGCTCTAGTGTACTCAT  100

seq1  ATAAATGAAAATAAATAAATCTTTAAAAAAAAAAACAAGAAAAACAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGAAAATAAATAAATCTTTAAAAAAAAAAACAAGAAAAACAGTTG  150

seq1  CTGAGTGTAATTCAAGTACTCGGTTTCTTTAAAAAAAAAGATGTTCTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGTAATTCAAGTACTCGGTTTCTTTAAAAAAAAAGATGTTCTTGA  200

seq1  TAAAGCAGCAAGAATATTGATTCATAGAGGCAGAAGAATTGTGAGCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGCAAGAATATTGATTCATAGAGGCAGAAGAATTGTGAGCTAAG  250

seq1  GTTGGCATGGCAACCGTAAGTACACTTGTCTGTACAAAGAAAATAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATGGCAACCGTAAGTACACTTGTCTGTACAAAGAAAATAATTTT  300

seq1  CATTTTGGGATGTGCACAGGGGTATACATATGTAATCCCAGACCTTGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGGGATGTGCACAGGGGTATACATATGTAATCCCAGACCTTGGAA  350

seq1  AACTGAGGCAGGAGGATGGAAAGTTTGAGGTCAGCCAAGGCTGCATAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGGCAGGAGGATGGAAAGTTTGAGGTCAGCCAAGGCTGCATAGTA  400

seq1  AGACTCCATCCCATAAAAGGAAAAAAGCAGAAAAGAAGACAGCATGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCATCCCATAAAAGGAAAAAAGCAGAAAAGAAGACAGCATGCTAT  450

seq1  TTATTCGTTGTGTCACCTGTGGGATGCCTTAAGATTAACTTGCCAAGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCGTTGTGTCACCTGTGGGATGCCTTAAGATTAACTTGCCAAGTCC  500

seq1  CCACTATACAGATGAGATGGCTGTCGTTCAGGTTTAGCAACTGACTGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATACAGATGAGATGGCTGTCGTTCAGGTTTAGCAACTGACTGACC  550

seq1  AGAACACTTCATCTCTGAAGTCCCTGTTTCCCTCAGCCATAGAAGATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTTCATCTCTGAAGTCCCTGTTTCCCTCAGCCATAGAAGATTCT  600

seq1  CTCCCCCTCCCCATGGGCACAGACATCATAATGGGCACCCAGATTGAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTCCCCATGGGCACAGACATCATAATGGGCACCCAGATTGAGCC  650

seq1  AAACAAGACAGAAGGGAGCAGGGACAGCCTTCCATTGGACTTCTTCCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGACAGAAGGGAGCAGGGACAGCCTTCCATTGGACTTCTTCCCTT  700

seq1  AATTCCTCTACTATGTCCCCGACATCCCAAAGACGATCCTATCTCTATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTCTACTATGTCCCCGACATCCCAAAGACGATCCTATCTCTATAA  750

seq1  AATGTATATATAGGATCAGGTTGGTTAAGGACAGGAAGTTGGTTTCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATATATAGGATCAGGTTGGTTAAGGACAGGAAGTTGGTTTCCTGG  800

seq1  TAAATATTATTGTGAAAGGCATTCATTTACATATTTTGCTAATCATCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTATTGTGAAAGGCATTCATTTACATATTTTGCTAATCATCTTC  850

seq1  CTGCAGGAGGCCTGTCTCTTCCTCAAACAGAGGCTTCTGCGCAGGCTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGCAGGAGGCCTGTCTCTTCCTCAAACAGAGGCTTCTGCGCA-GCTCAT  899

seq1  GAGAGTTCAGCTAAGATGACAACAAACTAAGCCTCCAGGTCTGACACCGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTCAGCTAAGATGACAACAAACTAAGCCTCCAGGTCTGACACCGC  949

seq1  TGTTGGGGGGAGGGGGGG  968
      ||||||||||||||||||
seq2  TGTTGGGGGGAGGGGGGG  967

seq1: chr10_69800737_69801718
seq2: B6Ng01-174K03.g_67_1057 (reverse)

seq1  CCCCCATCCCCC-GCCAAAAAAGAAAAAA--CAAAACAAAAACCCAAACC  47
      |||| ||||||| || |||||||||||||   |||||||||| |||||||
seq2  CCCCAATCCCCCGGCAAAAAAAGAAAAAAACAAAAACAAAAAACCAAACC  50

seq1  -AAGTGGCATCGTCTTCTC-TCTTATTTTAAAAGATTTA--TTTTATTCA  93
       |||||||||||||||||| ||||||||||||||  |||  |||||||||
seq2  AAAGTGGCATCGTCTTCTCTTCTTATTTTAAAAGGATTAATTTTTATTCA  100

seq1  TTTTA-TGTATATGACTACACTGTGACTGTC-TTCAGA-CACACCAGAAG  140
      ||||| ||||||||||||||||||||||||| |||||| |||||||||||
seq2  TTTTATTGTATATGACTACACTGTGACTGTCTTTCAGACCACACCAGAAG  150

seq1  AACGCATCAGATCCCATGTGATTGCTGGGATTTGAACTCAGGACCAGTGC  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCATCAGATCCCATGTGATTGCTGGGATTTGAACTCAGGACCAGTGC  200

seq1  TCTTAACCGCTGAGCCATGTCTCCAGCCTAAGTGTTGTCCTCTAATCCTG  240
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCTTAACCGCTGAGCCATGTCTCCAGCCTAAGTG-TGTCCTCTAATCCTG  249

seq1  CTCTTCTGTCCTGGACTTTTTCTTCTCCTTTCTTCCACCATCGAGTGCTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGTCCTGGACTTTTTCTTCTCCTTTCTTCCACCATCGAGTGCTC  299

seq1  TATGCCTGATTCAGCTTCTAGCCATGTCTTCTCACAAGGCTTTCAAAATC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTGATTCAGCTTCTAGCCATGTCTTCTCACAAGGCTTTCAAAATC  349

seq1  AAGCAGTTTCTGGCCAAGAAACAAAAGTGAAATTGTCCTATCCCTCAATG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTTCTGGCCAAGAAACAAAAGTGAAATTGTCCTATCCCTCAATG  399

seq1  GATTCAGATGAAAACCGGTAACAAAATCAGGTACAGATCTAAGAGAAGAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGATGAAAACCGGTAACAAAATCAGGTACAGATCTAAGAGAAGAC  449

seq1  ACTGGAGGAGAACAAAGCTGGGTCTGTAAGGATTCACACAATGGCAAGAC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGGAGAACAAAGCTGGGTCTGTAAGGATTCACACAATGGCAAGAC  499

seq1  TGAGAGTTTATACTGAATCATGGTCATCCATCAATCCTACCAGACGGAGT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTTATACTGAATCATGGTCATCCATCAATCCTACCAGACGGAGT  549

seq1  TCAACATTTTTAACCTGGAGACTTGCTCATGTCTAAAGGGGGGATGTGGT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATTTTTAACCTGGAGACTTGCTCATGTCTAAAGGGGGGATGTGGT  599

seq1  TTGTCCAATAATAAAATGTAGAACCTTTCAAAAAACAAAAACTAATAATA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCAATAATAAAATGTAGAACCTTTCAAAAAACAAAAACTAATAATA  649

seq1  ATAATGATGATAGTAAAACAAAAAAACACCAACCTATTCACTTACTGTAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATGATAGTAAAACAAAAAAACACCAACCTATTCACTTACTGTAG  699

seq1  TATAGCTTCCCACAACTTCTTTCTGGATTTAAGAGCTTTTTTTTCCCACC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTCCCACAACTTCTTTCTGGATTTAAGAGCTTTTTTTTCCCACC  749

seq1  CAGAACAAGAGAAAAATGAAGCCAGAGCACAGCCTGCCTAGTAAGTACAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAAGAGAAAAATGAAGCCAGAGCACAGCCTGCCTAGTAAGTACAT  799

seq1  ACTGATTCCATCAAATTTACCAGCATCCAAATATAGGGGAAAGTTTTTGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTCCATCAAATTTACCAGCATCCAAATATAGGGGAAAGTTTTTGA  849

seq1  AAAGTGATCAAAGAATTCAAGGTTTGGCCAAAGCAATTTCTCGGCCAGGA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGATCAAAGAATTCAAGGTTTGGCCAAAGCAATTTCTCGGCCAGGA  899

seq1  ATCTCTGGGCTGCTTGATTTAAAGTCTTTCTTTATGCATTTTGGTAAGTG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGGCTGCTTGATTTAAAGTCTTTCTTTATGCATTTTGGTAAGTG  949

seq1  ACCCTCAGATGCAAAAAGATAGATGGTGTTTTCTCTGAATTC  982
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGATGCAAAAAGATAGATGGTGTTTTCTCTGAATTC  991